RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 A0A0A0MQY5 61 aa10.49□□□□□ -0.73
CMTM4-201ENST00000330687 FAT1Q14517 4588 aa10.46□□□□□ -0.74
CMTM4-201ENST00000330687 RPS29P62273 56 aaKnown RBP10.45□□□□□ -0.74
CMTM4-201ENST00000330687 KRTAP10-8P60410 259 aa10.44□□□□□ -0.74
CMTM4-201ENST00000330687 HYDINQ4G0P3 5121 aa10.42□□□□□ -0.74
CMTM4-201ENST00000330687 MYCBP2O75592 4640 aa10.37□□□□□ -0.75
CMTM4-201ENST00000330687 KRTAP12-1P59990 96 aa10.36□□□□□ -0.75
CMTM4-201ENST00000330687 PKHD1P08F94 4074 aa10.35□□□□□ -0.75
CMTM4-201ENST00000330687 LUZP6Q538Z0 58 aa10.29□□□□□ -0.76
CMTM4-201ENST00000330687 PKD1P98161 4303 aa10.25□□□□□ -0.77
CMTM4-201ENST00000330687 DYNC1H1Q14204 4646 aaKnown RBP10.2□□□□□ -0.78
CMTM4-201ENST00000330687 XP32Q5T750 250 aa10.18□□□□□ -0.78
CMTM4-201ENST00000330687 M0QZ58 72 aa10.14□□□□□ -0.79
CMTM4-201ENST00000330687 SACSQ9NZJ4 4579 aa10.13□□□□□ -0.79
CMTM4-201ENST00000330687 PLAC4Q8WY50 150 aa10.12□□□□□ -0.79
CMTM4-201ENST00000330687 APOBP04114 4563 aaKnown RBP10.09□□□□□ -0.79
CMTM4-201ENST00000330687 LRP1Q07954 4544 aaKnown RBP10.07□□□□□ -0.8
CMTM4-201ENST00000330687 HSPG2P98160 4391 aa10.07□□□□□ -0.8
CMTM4-201ENST00000330687 R4GN34 69 aa10.04□□□□□ -0.8
CMTM4-201ENST00000330687 KMT2CQ8NEZ4 4911 aaKnown RBP9.97□□□□□ -0.81
CMTM4-201ENST00000330687 KRTAP10-4P60372 401 aaPredicted RBP9.91□□□□□ -0.82
CMTM4-201ENST00000330687 FAT3Q8TDW7 4589 aa9.84□□□□□ -0.83
CMTM4-201ENST00000330687 LPAP08519 4548 aa9.82□□□□□ -0.84
CMTM4-201ENST00000330687 CAMK2N1Q7Z7J9 78 aa9.76□□□□□ -0.85
CMTM4-201ENST00000330687 PKHD1L1Q86WI1 4243 aa9.75□□□□□ -0.85
CMTM4-201ENST00000330687 Q5VSD8 79 aa9.71□□□□□ -0.85
CMTM4-201ENST00000330687 LRP2P98164 4655 aa9.7□□□□□ -0.86
CMTM4-201ENST00000330687 LORP23490 312 aaPredicted RBP9.68□□□□□ -0.86
CMTM4-201ENST00000330687 KIAA1109Q2LD37 5005 aa9.68□□□□□ -0.86
CMTM4-201ENST00000330687 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
CMTM4-201ENST00000330687 RYR3Q15413 4870 aa9.51□□□□□ -0.89
CMTM4-201ENST00000330687 RYR1P21817 5038 aa9.47□□□□□ -0.89
CMTM4-201ENST00000330687 RYR2Q92736 4967 aa9.47□□□□□ -0.89
CMTM4-201ENST00000330687 TNXBP22105 4242 aa9.45□□□□□ -0.9
CMTM4-201ENST00000330687 PP632Q6XCG6 107 aa9.37□□□□□ -0.91
CMTM4-201ENST00000330687 KRTAP17-1Q9BYP8 105 aa9.35□□□□□ -0.91
CMTM4-201ENST00000330687 EPPK1P58107 5090 aaKnown RBP9.29□□□□□ -0.92
CMTM4-201ENST00000330687 KRTAP21-3Q3LHN1 58 aa9.28□□□□□ -0.92
CMTM4-201ENST00000330687 MT1HL1P0DM35 61 aa9.25□□□□□ -0.93
CMTM4-201ENST00000330687 KRTAP4-5Q9BYR2 181 aa9.19□□□□□ -0.94
CMTM4-201ENST00000330687 TNP1P09430 55 aa9.19□□□□□ -0.94
CMTM4-201ENST00000330687 ABCA13Q86UQ4 5058 aa9.13□□□□□ -0.95
CMTM4-201ENST00000330687 J3QL48 77 aa9.09□□□□□ -0.95
CMTM4-201ENST00000330687 MUC2Q02817 5179 aa9.09□□□□□ -0.96
CMTM4-201ENST00000330687 SEC61BP60468 96 aaKnown RBP9.05□□□□□ -0.96
CMTM4-201ENST00000330687 KRTAP4-1Q9BYQ7 146 aa8.99□□□□□ -0.97
CMTM4-201ENST00000330687 HERC2O95714 4834 aa8.82□□□□□ -1
CMTM4-201ENST00000330687 SPRR5A0A1B0GTR4 108 aa8.75□□□□□ -1.01
CMTM4-201ENST00000330687 PRO2289Q9P1D8 64 aa8.73□□□□□ -1.01
CMTM4-201ENST00000330687 HERC1Q15751 4861 aa8.7□□□□□ -1.02
CMTM4-201ENST00000330687 MUC17Q685J3 4493 aa8.68□□□□□ -1.02
CMTM4-201ENST00000330687 RNF213Q63HN8 5207 aa8.65□□□□□ -1.03
CMTM4-201ENST00000330687 LCE3AQ5TA76 89 aa8.63□□□□□ -1.03
CMTM4-201ENST00000330687 FAT4Q6V0I7 4981 aa8.6□□□□□ -1.03
CMTM4-201ENST00000330687 M0R2T5 61 aa8.52□□□□□ -1.05
CMTM4-201ENST00000330687 KRTAP23-1A1A580 65 aa8.5□□□□□ -1.05
CMTM4-201ENST00000330687 KRTAP19-2Q3LHN2 52 aa8.48□□□□□ -1.05
CMTM4-201ENST00000330687 PCLOQ9Y6V0 5065 aa8.41□□□□□ -1.06
CMTM4-201ENST00000330687 INE1O15225 51 aa8.4□□□□□ -1.06
CMTM4-201ENST00000330687 UBR4Q5T4S7 5183 aa8.36□□□□□ -1.07
CMTM4-201ENST00000330687 FLGP20930 4061 aaPredicted RBP8.3□□□□□ -1.08
CMTM4-201ENST00000330687 KRTAP10-10P60014 251 aa8.21□□□□□ -1.09
CMTM4-201ENST00000330687 KRTAP19-1Q8IUB9 90 aa8.19□□□□□ -1.1
CMTM4-201ENST00000330687 KRTAP12-3P60328 96 aa8.15□□□□□ -1.11
CMTM4-201ENST00000330687 HMCN2Q8NDA2 5059 aa8.14□□□□□ -1.11
CMTM4-201ENST00000330687 BIRC6Q9NR09 4857 aa8.13□□□□□ -1.11
CMTM4-201ENST00000330687 SPRR2GQ9BYE4 73 aa8.1□□□□□ -1.11
CMTM4-201ENST00000330687 KRTAP8-1Q8IUC2 63 aa8.06□□□□□ -1.12
CMTM4-201ENST00000330687 KRTAP10-12P60413 245 aa8.01□□□□□ -1.13
CMTM4-201ENST00000330687 MT1FP04733 61 aa7.9□□□□□ -1.14
CMTM4-201ENST00000330687 FSIP2Q5CZC0 6907 aa7.86□□□□□ -1.15
CMTM4-201ENST00000330687 LCE2CQ5TA81 110 aa7.84□□□□□ -1.15
CMTM4-201ENST00000330687 KRTAP10-7P60409 375 aaPredicted RBP7.82□□□□□ -1.16
CMTM4-201ENST00000330687 MT2AP02795 61 aa7.81□□□□□ -1.16
CMTM4-201ENST00000330687 KRTAP10-5P60370 271 aa7.79□□□□□ -1.16
CMTM4-201ENST00000330687 MT1XP80297 61 aa7.78□□□□□ -1.16
CMTM4-201ENST00000330687 USH2AO75445 5202 aa7.76□□□□□ -1.17
CMTM4-201ENST00000330687 MT1HP80294 61 aa7.72□□□□□ -1.17
CMTM4-201ENST00000330687 KMT2DO14686 5537 aa7.71□□□□□ -1.18
CMTM4-201ENST00000330687 MT1BP07438 61 aa7.65□□□□□ -1.18
CMTM4-201ENST00000330687 KRTAP19-5Q3LI72 72 aa7.61□□□□□ -1.19
CMTM4-201ENST00000330687 LCE3CQ5T5A8 94 aa7.57□□□□□ -1.2
CMTM4-201ENST00000330687 KRTAP9-8Q9BYQ0 159 aa7.56□□□□□ -1.2
CMTM4-201ENST00000330687 KRTAP19-8Q3LI54 63 aa7.53□□□□□ -1.2
CMTM4-201ENST00000330687 KRTAP9-6A8MVA2 160 aa7.44□□□□□ -1.22
CMTM4-201ENST00000330687 KRTAP4-7Q9BYR0 210 aa7.44□□□□□ -1.22
CMTM4-201ENST00000330687 KRTAP4-8A0A0G2JLE6 195 aa7.38□□□□□ -1.23
CMTM4-201ENST00000330687 KRTAP4-8Q9BYQ9 185 aa7.38□□□□□ -1.23
CMTM4-201ENST00000330687 KRTAP9-3Q9BYQ3 159 aa7.17□□□□□ -1.26
CMTM4-201ENST00000330687 KRTAP2-3P0C7H8 128 aa7.1□□□□□ -1.27
CMTM4-201ENST00000330687 KRTAP2-4Q9BYR9 128 aa7.1□□□□□ -1.27
CMTM4-201ENST00000330687 KRTAP2-1Q9BYU5 128 aa7.1□□□□□ -1.27
CMTM4-201ENST00000330687 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
CMTM4-201ENST00000330687 LCE2BO14633 110 aa6.96□□□□□ -1.3
CMTM4-201ENST00000330687 DSTQ03001 7570 aaKnown RBP6.93□□□□□ -1.3
CMTM4-201ENST00000330687 KRTAP12-4P60329 112 aa6.91□□□□□ -1.3
CMTM4-201ENST00000330687 KRTAP19-7Q3SYF9 63 aa6.89□□□□□ -1.31
CMTM4-201ENST00000330687 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
CMTM4-201ENST00000330687 FCGBPQ9Y6R7 5405 aaPredicted RBP6.83□□□□□ -1.32
CMTM4-201ENST00000330687 SYNE1Q8NF91 8797 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 192.9 ms