RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 SRRM2Q9UQ35 2752 aaKnown RBP6.71□□□□□ -1.33
PTPN21-201ENST00000328736 DNAH9Q9NYC9 4486 aa6.69□□□□□ -1.34
PTPN21-201ENST00000328736 COL7A1Q02388 2944 aa6.66□□□□□ -1.34
PTPN21-201ENST00000328736 LCE3AQ5TA76 89 aa6.63□□□□□ -1.35
PTPN21-201ENST00000328736 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
PTPN21-201ENST00000328736 DNAH1Q9P2D7 4330 aa6.61□□□□□ -1.35
PTPN21-201ENST00000328736 KRTAP8-1Q8IUC2 63 aa6.52□□□□□ -1.37
PTPN21-201ENST00000328736 DNAH10Q8IVF4 4471 aa6.52□□□□□ -1.37
PTPN21-201ENST00000328736 KRTAP10-5P60370 271 aa6.47□□□□□ -1.37
PTPN21-201ENST00000328736 PLECQ15149 4684 aaKnown RBP6.47□□□□□ -1.37
PTPN21-201ENST00000328736 DNAH5Q8TE73 4624 aa6.44□□□□□ -1.38
PTPN21-201ENST00000328736 DNAH3Q8TD57 4116 aa6.36□□□□□ -1.39
PTPN21-201ENST00000328736 DNAH2Q9P225 4427 aa6.35□□□□□ -1.39
PTPN21-201ENST00000328736 DNAH11Q96DT5 4516 aa6.33□□□□□ -1.4
PTPN21-201ENST00000328736 DNAH17Q9UFH2 4485 aa6.31□□□□□ -1.4
PTPN21-201ENST00000328736 KRTAP4-1Q9BYQ7 146 aa6.3□□□□□ -1.4
PTPN21-201ENST00000328736 VPS13DQ5THJ4 4388 aa6.28□□□□□ -1.4
PTPN21-201ENST00000328736 ANK2Q01484 3957 aa6.25□□□□□ -1.41
PTPN21-201ENST00000328736 STARD9Q9P2P6 4700 aa6.22□□□□□ -1.41
PTPN21-201ENST00000328736 LRP1BQ9NZR2 4599 aa6.16□□□□□ -1.42
PTPN21-201ENST00000328736 DNAH8Q96JB1 4490 aa6.16□□□□□ -1.42
PTPN21-201ENST00000328736 FAT2Q9NYQ8 4349 aa6.15□□□□□ -1.42
PTPN21-201ENST00000328736 FRAS1Q86XX4 4008 aa6.15□□□□□ -1.43
PTPN21-201ENST00000328736 KMT2AQ03164 3969 aa6.14□□□□□ -1.43
PTPN21-201ENST00000328736 MT1HP80294 61 aa6.12□□□□□ -1.43
PTPN21-201ENST00000328736 CMYA5Q8N3K9 4069 aa6.12□□□□□ -1.43
PTPN21-201ENST00000328736 DYNC1H1Q14204 4646 aaKnown RBP6.11□□□□□ -1.43
PTPN21-201ENST00000328736 DYNC2H1Q8NCM8 4307 aaKnown RBP6.09□□□□□ -1.43
PTPN21-201ENST00000328736 KRTAP10-7P60409 375 aaPredicted RBP6.08□□□□□ -1.44
PTPN21-201ENST00000328736 SACSQ9NZJ4 4579 aa6.06□□□□□ -1.44
PTPN21-201ENST00000328736 FAT1Q14517 4588 aa6.04□□□□□ -1.44
PTPN21-201ENST00000328736 VPS13BQ7Z7G8 4022 aa6.02□□□□□ -1.45
PTPN21-201ENST00000328736 PRKDCP78527 4128 aaKnown RBP6.01□□□□□ -1.45
PTPN21-201ENST00000328736 DNHD1Q96M86 4753 aa6□□□□□ -1.45
PTPN21-201ENST00000328736 SPRR2FQ96RM1 72 aa6□□□□□ -1.45
PTPN21-201ENST00000328736 MT2AP02795 61 aa5.99□□□□□ -1.45
PTPN21-201ENST00000328736 SPRR2GQ9BYE4 73 aa5.99□□□□□ -1.45
PTPN21-201ENST00000328736 DNAH7Q8WXX0 4024 aa5.94□□□□□ -1.46
PTPN21-201ENST00000328736 LYSTQ99698 3801 aa5.94□□□□□ -1.46
PTPN21-201ENST00000328736 MT1FP04733 61 aa5.92□□□□□ -1.46
PTPN21-201ENST00000328736 KRTAP19-5Q3LI72 72 aa5.91□□□□□ -1.46
PTPN21-201ENST00000328736 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.47
PTPN21-201ENST00000328736 LCE3CQ5T5A8 94 aa5.87□□□□□ -1.47
PTPN21-201ENST00000328736 APOBP04114 4563 aaKnown RBP5.87□□□□□ -1.47
PTPN21-201ENST00000328736 RYR1P21817 5038 aa5.84□□□□□ -1.47
PTPN21-201ENST00000328736 DNAH6Q9C0G6 4158 aa5.84□□□□□ -1.48
PTPN21-201ENST00000328736 HECTD4Q9Y4D8 3996 aa5.8□□□□□ -1.48
PTPN21-201ENST00000328736 KRTAP17-1Q9BYP8 105 aa5.77□□□□□ -1.49
PTPN21-201ENST00000328736 SPRR2EP22531 72 aa5.7□□□□□ -1.5
PTPN21-201ENST00000328736 SPRR2BP35325 72 aa5.7□□□□□ -1.5
PTPN21-201ENST00000328736 SPRR2AP35326 72 aa5.7□□□□□ -1.5
PTPN21-201ENST00000328736 RYR3Q15413 4870 aa5.64□□□□□ -1.51
PTPN21-201ENST00000328736 FAT3Q8TDW7 4589 aa5.61□□□□□ -1.51
PTPN21-201ENST00000328736 MYCBP2O75592 4640 aa5.6□□□□□ -1.51
PTPN21-201ENST00000328736 LRP1Q07954 4544 aaKnown RBP5.56□□□□□ -1.52
PTPN21-201ENST00000328736 SPRR2DP22532 72 aa5.54□□□□□ -1.52
PTPN21-201ENST00000328736 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
PTPN21-201ENST00000328736 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
PTPN21-201ENST00000328736 KRTAP19-1Q8IUB9 90 aa5.48□□□□□ -1.53
PTPN21-201ENST00000328736 HSPG2P98160 4391 aa5.48□□□□□ -1.53
PTPN21-201ENST00000328736 LCE2BO14633 110 aa5.48□□□□□ -1.53
PTPN21-201ENST00000328736 LPAP08519 4548 aa5.47□□□□□ -1.53
PTPN21-201ENST00000328736 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
PTPN21-201ENST00000328736 HYDINQ4G0P3 5121 aa5.46□□□□□ -1.53
PTPN21-201ENST00000328736 MT1XP80297 61 aa5.43□□□□□ -1.54
PTPN21-201ENST00000328736 MT1GP13640 62 aa5.39□□□□□ -1.55
PTPN21-201ENST00000328736 KRTAP4-8A0A0G2JLE6 195 aa5.36□□□□□ -1.55
PTPN21-201ENST00000328736 KRTAP4-8Q9BYQ9 185 aa5.36□□□□□ -1.55
PTPN21-201ENST00000328736 PKHD1P08F94 4074 aa5.35□□□□□ -1.55
PTPN21-201ENST00000328736 MT1BP07438 61 aa5.34□□□□□ -1.56
PTPN21-201ENST00000328736 PKD1P98161 4303 aa5.32□□□□□ -1.56
PTPN21-201ENST00000328736 RYR2Q92736 4967 aa5.32□□□□□ -1.56
PTPN21-201ENST00000328736 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
PTPN21-201ENST00000328736 TNXBP22105 4242 aa5.28□□□□□ -1.56
PTPN21-201ENST00000328736 KIAA1109Q2LD37 5005 aa5.26□□□□□ -1.57
PTPN21-201ENST00000328736 PKHD1L1Q86WI1 4243 aa5.26□□□□□ -1.57
PTPN21-201ENST00000328736 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
PTPN21-201ENST00000328736 LCE2CQ5TA81 110 aa5.21□□□□□ -1.57
PTPN21-201ENST00000328736 LRP2P98164 4655 aa5.18□□□□□ -1.58
PTPN21-201ENST00000328736 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
PTPN21-201ENST00000328736 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
PTPN21-201ENST00000328736 HERC1Q15751 4861 aa5.17□□□□□ -1.58
PTPN21-201ENST00000328736 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
PTPN21-201ENST00000328736 LCE2DQ5TA82 110 aaPredicted RBP5.07□□□□□ -1.6
PTPN21-201ENST00000328736 HERC2O95714 4834 aa5.07□□□□□ -1.6
PTPN21-201ENST00000328736 KRTAP19-3Q7Z4W3 81 aa5.06□□□□□ -1.6
PTPN21-201ENST00000328736 KMT2CQ8NEZ4 4911 aaKnown RBP5.05□□□□□ -1.6
PTPN21-201ENST00000328736 SPRR5A0A1B0GTR4 108 aa5.04□□□□□ -1.6
PTPN21-201ENST00000328736 MUC17Q685J3 4493 aa4.98□□□□□ -1.61
PTPN21-201ENST00000328736 BIRC6Q9NR09 4857 aa4.97□□□□□ -1.61
PTPN21-201ENST00000328736 MT1LQ93083 61 aa4.97□□□□□ -1.61
PTPN21-201ENST00000328736 KRTAP19-2Q3LHN2 52 aa4.93□□□□□ -1.62
PTPN21-201ENST00000328736 MT3P25713 68 aa4.9□□□□□ -1.63
PTPN21-201ENST00000328736 PCLOQ9Y6V0 5065 aa4.9□□□□□ -1.63
PTPN21-201ENST00000328736 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.63
PTPN21-201ENST00000328736 MT1EP04732 61 aa4.87□□□□□ -1.63
PTPN21-201ENST00000328736 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
PTPN21-201ENST00000328736 MT4P47944 62 aa4.83□□□□□ -1.64
PTPN21-201ENST00000328736 KRTAP4-3Q9BYR4 195 aa4.81□□□□□ -1.64
PTPN21-201ENST00000328736 MT1MQ8N339 61 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 327.7 ms