RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 KRTAP10-4P60372 401 aaPredicted RBP6.61□□□□□ -1.35
SMAD3-201ENST00000327367 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.35
SMAD3-201ENST00000327367 BSNQ9UPA5 3926 aa6.51□□□□□ -1.37
SMAD3-201ENST00000327367 ALMS1Q8TCU4 4167 aa6.48□□□□□ -1.37
SMAD3-201ENST00000327367 KRTAP19-5Q3LI72 72 aa6.34□□□□□ -1.39
SMAD3-201ENST00000327367 KRTAP4-1Q9BYQ7 146 aa6.32□□□□□ -1.4
SMAD3-201ENST00000327367 AKAP9Q99996 3911 aa6.28□□□□□ -1.4
SMAD3-201ENST00000327367 LCE3CQ5T5A8 94 aa6.28□□□□□ -1.4
SMAD3-201ENST00000327367 DNAH2Q9P225 4427 aa6.26□□□□□ -1.41
SMAD3-201ENST00000327367 DNAH8Q96JB1 4490 aa6.24□□□□□ -1.41
SMAD3-201ENST00000327367 DNAH1Q9P2D7 4330 aa6.21□□□□□ -1.41
SMAD3-201ENST00000327367 DNAH10Q8IVF4 4471 aa6.2□□□□□ -1.42
SMAD3-201ENST00000327367 MT1HP80294 61 aa6.16□□□□□ -1.42
SMAD3-201ENST00000327367 ZNF469Q96JG9 3925 aaPredicted RBP6.13□□□□□ -1.43
SMAD3-201ENST00000327367 DNAH11Q96DT5 4516 aa6.12□□□□□ -1.43
SMAD3-201ENST00000327367 MT2AP02795 61 aa6.11□□□□□ -1.43
SMAD3-201ENST00000327367 KRTAP10-7P60409 375 aaPredicted RBP6.1□□□□□ -1.43
SMAD3-201ENST00000327367 SPRR2GQ9BYE4 73 aa6.09□□□□□ -1.43
SMAD3-201ENST00000327367 SPRR2FQ96RM1 72 aa6.08□□□□□ -1.44
SMAD3-201ENST00000327367 DNAH5Q8TE73 4624 aa6.08□□□□□ -1.44
SMAD3-201ENST00000327367 DNAH9Q9NYC9 4486 aa6.07□□□□□ -1.44
SMAD3-201ENST00000327367 LCE3BQ5TA77 95 aa6.06□□□□□ -1.44
SMAD3-201ENST00000327367 MT1FP04733 61 aa6.04□□□□□ -1.44
SMAD3-201ENST00000327367 KRTAP12-4P60329 112 aa5.99□□□□□ -1.45
SMAD3-201ENST00000327367 FAT1Q14517 4588 aa5.99□□□□□ -1.45
SMAD3-201ENST00000327367 ANK2Q01484 3957 aa5.94□□□□□ -1.46
SMAD3-201ENST00000327367 PLECQ15149 4684 aaKnown RBP5.92□□□□□ -1.46
SMAD3-201ENST00000327367 DNAH3Q8TD57 4116 aa5.9□□□□□ -1.47
SMAD3-201ENST00000327367 DNAH17Q9UFH2 4485 aa5.88□□□□□ -1.47
SMAD3-201ENST00000327367 FRAS1Q86XX4 4008 aa5.87□□□□□ -1.47
SMAD3-201ENST00000327367 MT1GP13640 62 aa5.85□□□□□ -1.47
SMAD3-201ENST00000327367 APOBP04114 4563 aaKnown RBP5.73□□□□□ -1.49
SMAD3-201ENST00000327367 VPS13DQ5THJ4 4388 aa5.73□□□□□ -1.49
SMAD3-201ENST00000327367 SACSQ9NZJ4 4579 aa5.71□□□□□ -1.49
SMAD3-201ENST00000327367 FAT2Q9NYQ8 4349 aa5.71□□□□□ -1.5
SMAD3-201ENST00000327367 LRP1BQ9NZR2 4599 aa5.71□□□□□ -1.5
SMAD3-201ENST00000327367 VPS13BQ7Z7G8 4022 aa5.69□□□□□ -1.5
SMAD3-201ENST00000327367 SPRR2EP22531 72 aa5.64□□□□□ -1.51
SMAD3-201ENST00000327367 SPRR2BP35325 72 aa5.64□□□□□ -1.51
SMAD3-201ENST00000327367 SPRR2AP35326 72 aa5.64□□□□□ -1.51
SMAD3-201ENST00000327367 CMYA5Q8N3K9 4069 aa5.63□□□□□ -1.51
SMAD3-201ENST00000327367 STARD9Q9P2P6 4700 aa5.63□□□□□ -1.51
SMAD3-201ENST00000327367 MT1XP80297 61 aa5.63□□□□□ -1.51
SMAD3-201ENST00000327367 DYNC2H1Q8NCM8 4307 aaKnown RBP5.62□□□□□ -1.51
SMAD3-201ENST00000327367 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
SMAD3-201ENST00000327367 LCE3DQ9BYE3 92 aa5.61□□□□□ -1.51
SMAD3-201ENST00000327367 DYNC1H1Q14204 4646 aaKnown RBP5.61□□□□□ -1.51
SMAD3-201ENST00000327367 KRTAP4-8A0A0G2JLE6 195 aa5.6□□□□□ -1.51
SMAD3-201ENST00000327367 KRTAP4-8Q9BYQ9 185 aa5.6□□□□□ -1.51
SMAD3-201ENST00000327367 DNAH6Q9C0G6 4158 aa5.6□□□□□ -1.51
SMAD3-201ENST00000327367 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
SMAD3-201ENST00000327367 KMT2AQ03164 3969 aa5.6□□□□□ -1.51
SMAD3-201ENST00000327367 DNHD1Q96M86 4753 aa5.59□□□□□ -1.51
SMAD3-201ENST00000327367 DNAH7Q8WXX0 4024 aa5.53□□□□□ -1.52
SMAD3-201ENST00000327367 LCE3EQ5T5B0 92 aa5.51□□□□□ -1.53
SMAD3-201ENST00000327367 PRKDCP78527 4128 aaKnown RBP5.5□□□□□ -1.53
SMAD3-201ENST00000327367 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
SMAD3-201ENST00000327367 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
SMAD3-201ENST00000327367 KRTAP19-8Q3LI54 63 aa5.49□□□□□ -1.53
SMAD3-201ENST00000327367 LYSTQ99698 3801 aa5.46□□□□□ -1.53
SMAD3-201ENST00000327367 MT1BP07438 61 aa5.42□□□□□ -1.54
SMAD3-201ENST00000327367 SPRR2DP22532 72 aa5.42□□□□□ -1.54
SMAD3-201ENST00000327367 RYR1P21817 5038 aa5.4□□□□□ -1.54
SMAD3-201ENST00000327367 PRM1P04553 51 aa5.4□□□□□ -1.55
SMAD3-201ENST00000327367 LCE2BO14633 110 aa5.38□□□□□ -1.55
SMAD3-201ENST00000327367 MYCBP2O75592 4640 aa5.37□□□□□ -1.55
SMAD3-201ENST00000327367 HECTD4Q9Y4D8 3996 aa5.32□□□□□ -1.56
SMAD3-201ENST00000327367 LRP1Q07954 4544 aaKnown RBP5.3□□□□□ -1.56
SMAD3-201ENST00000327367 FAT3Q8TDW7 4589 aa5.29□□□□□ -1.56
SMAD3-201ENST00000327367 KRTAP17-1Q9BYP8 105 aa5.25□□□□□ -1.57
SMAD3-201ENST00000327367 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
SMAD3-201ENST00000327367 LOC100996750A0A140TA64 210 aa5.21□□□□□ -1.58
SMAD3-201ENST00000327367 MT1LQ93083 61 aa5.15□□□□□ -1.59
SMAD3-201ENST00000327367 PKD1P98161 4303 aa5.11□□□□□ -1.59
SMAD3-201ENST00000327367 LPAP08519 4548 aa5.11□□□□□ -1.59
SMAD3-201ENST00000327367 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
SMAD3-201ENST00000327367 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
SMAD3-201ENST00000327367 RYR3Q15413 4870 aa5.09□□□□□ -1.59
SMAD3-201ENST00000327367 KRTAP4-3Q9BYR4 195 aa5.06□□□□□ -1.6
SMAD3-201ENST00000327367 MT1EP04732 61 aa5.03□□□□□ -1.6
SMAD3-201ENST00000327367 LCE2CQ5TA81 110 aa5.02□□□□□ -1.61
SMAD3-201ENST00000327367 LCE1BQ5T7P3 118 aa5.01□□□□□ -1.61
SMAD3-201ENST00000327367 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
SMAD3-201ENST00000327367 LCE2DQ5TA82 110 aaPredicted RBP4.98□□□□□ -1.61
SMAD3-201ENST00000327367 MT4P47944 62 aa4.97□□□□□ -1.61
SMAD3-201ENST00000327367 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
SMAD3-201ENST00000327367 MT3P25713 68 aa4.91□□□□□ -1.62
SMAD3-201ENST00000327367 MT1MQ8N339 61 aa4.91□□□□□ -1.62
SMAD3-201ENST00000327367 LRP2P98164 4655 aa4.88□□□□□ -1.63
SMAD3-201ENST00000327367 KIAA1109Q2LD37 5005 aa4.84□□□□□ -1.63
SMAD3-201ENST00000327367 HSPG2P98160 4391 aa4.84□□□□□ -1.64
SMAD3-201ENST00000327367 HYDINQ4G0P3 5121 aa4.82□□□□□ -1.64
SMAD3-201ENST00000327367 PKHD1L1Q86WI1 4243 aa4.82□□□□□ -1.64
SMAD3-201ENST00000327367 PKHD1P08F94 4074 aa4.82□□□□□ -1.64
SMAD3-201ENST00000327367 FLGP20930 4061 aaPredicted RBP4.79□□□□□ -1.64
SMAD3-201ENST00000327367 HERC1Q15751 4861 aa4.74□□□□□ -1.65
SMAD3-201ENST00000327367 TNXBP22105 4242 aa4.74□□□□□ -1.65
SMAD3-201ENST00000327367 HERC2O95714 4834 aa4.73□□□□□ -1.65
SMAD3-201ENST00000327367 KMT2CQ8NEZ4 4911 aaKnown RBP4.71□□□□□ -1.65
SMAD3-201ENST00000327367 RYR2Q92736 4967 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms