RNA–Protein interactions for RNA: ENST00000325438.12

PACS2-201, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACS2, Length 3,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-201ENST00000325438 R4GN34 69 aa12.07□□□□□ -0.48
PACS2-201ENST00000325438 KRTAP3-3Q9BYR6 98 aa12.07□□□□□ -0.48
PACS2-201ENST00000325438 XP32Q5T750 250 aa12.03□□□□□ -0.48
PACS2-201ENST00000325438 KRTAP3-2Q9BYR7 98 aa12.03□□□□□ -0.48
PACS2-201ENST00000325438 MYCBP2O75592 4640 aa12.03□□□□□ -0.48
PACS2-201ENST00000325438 LUZP6Q538Z0 58 aa12.01□□□□□ -0.49
PACS2-201ENST00000325438 Q5VSD8 79 aa12□□□□□ -0.49
PACS2-201ENST00000325438 DNHD1Q96M86 4753 aa11.95□□□□□ -0.5
PACS2-201ENST00000325438 KRTAP12-1P59990 96 aa11.94□□□□□ -0.5
PACS2-201ENST00000325438 KRTAP15-1Q3LI76 137 aa11.93□□□□□ -0.5
PACS2-201ENST00000325438 HYDINQ4G0P3 5121 aa11.89□□□□□ -0.51
PACS2-201ENST00000325438 DYNC1H1Q14204 4646 aaKnown RBP11.84□□□□□ -0.51
PACS2-201ENST00000325438 PKHD1P08F94 4074 aa11.83□□□□□ -0.52
PACS2-201ENST00000325438 CAMK2N1Q7Z7J9 78 aa11.83□□□□□ -0.52
PACS2-201ENST00000325438 FAT2Q9NYQ8 4349 aa11.81□□□□□ -0.52
PACS2-201ENST00000325438 PLAC4Q8WY50 150 aa11.69□□□□□ -0.54
PACS2-201ENST00000325438 SACSQ9NZJ4 4579 aa11.69□□□□□ -0.54
PACS2-201ENST00000325438 KRTAP10-4P60372 401 aaPredicted RBP11.69□□□□□ -0.54
PACS2-201ENST00000325438 LRP1Q07954 4544 aaKnown RBP11.66□□□□□ -0.54
PACS2-201ENST00000325438 A0A1B0GVY2 172 aa11.62□□□□□ -0.55
PACS2-201ENST00000325438 APOBP04114 4563 aaKnown RBP11.61□□□□□ -0.55
PACS2-201ENST00000325438 PKD1P98161 4303 aa11.56□□□□□ -0.56
PACS2-201ENST00000325438 FAT3Q8TDW7 4589 aa11.46□□□□□ -0.57
PACS2-201ENST00000325438 HSPG2P98160 4391 aa11.37□□□□□ -0.59
PACS2-201ENST00000325438 J3QL48 77 aa11.27□□□□□ -0.61
PACS2-201ENST00000325438 SEC61BP60468 96 aaKnown RBP11.24□□□□□ -0.61
PACS2-201ENST00000325438 LORP23490 312 aaPredicted RBP11.21□□□□□ -0.61
PACS2-201ENST00000325438 LRP2P98164 4655 aa11.19□□□□□ -0.62
PACS2-201ENST00000325438 MT1HL1P0DM35 61 aa11.1□□□□□ -0.63
PACS2-201ENST00000325438 KMT2CQ8NEZ4 4911 aaKnown RBP11.05□□□□□ -0.64
PACS2-201ENST00000325438 KIAA1109Q2LD37 5005 aa11.01□□□□□ -0.65
PACS2-201ENST00000325438 PP632Q6XCG6 107 aa11.01□□□□□ -0.65
PACS2-201ENST00000325438 RYR1P21817 5038 aa10.99□□□□□ -0.65
PACS2-201ENST00000325438 PKHD1L1Q86WI1 4243 aa10.99□□□□□ -0.65
PACS2-201ENST00000325438 TNP1P09430 55 aa10.98□□□□□ -0.65
PACS2-201ENST00000325438 LPAP08519 4548 aa10.97□□□□□ -0.65
PACS2-201ENST00000325438 KRTAP17-1Q9BYP8 105 aa10.83□□□□□ -0.68
PACS2-201ENST00000325438 M0R2T5 61 aa10.77□□□□□ -0.69
PACS2-201ENST00000325438 RYR3Q15413 4870 aa10.76□□□□□ -0.69
PACS2-201ENST00000325438 TNXBP22105 4242 aa10.73□□□□□ -0.69
PACS2-201ENST00000325438 RYR2Q92736 4967 aa10.66□□□□□ -0.7
PACS2-201ENST00000325438 KRTAP4-5Q9BYR2 181 aa10.66□□□□□ -0.7
PACS2-201ENST00000325438 KRTAP4-1Q9BYQ7 146 aa10.59□□□□□ -0.71
PACS2-201ENST00000325438 KRTAP21-3Q3LHN1 58 aa10.54□□□□□ -0.72
PACS2-201ENST00000325438 ABCA13Q86UQ4 5058 aa10.34□□□□□ -0.75
PACS2-201ENST00000325438 MUC2Q02817 5179 aa10.26□□□□□ -0.77
PACS2-201ENST00000325438 EPPK1P58107 5090 aaKnown RBP10.22□□□□□ -0.77
PACS2-201ENST00000325438 KRTAP10-10P60014 251 aa10.14□□□□□ -0.79
PACS2-201ENST00000325438 LCE3AQ5TA76 89 aa10.08□□□□□ -0.8
PACS2-201ENST00000325438 PRO2289Q9P1D8 64 aa10.04□□□□□ -0.8
PACS2-201ENST00000325438 HERC2O95714 4834 aa9.88□□□□□ -0.83
PACS2-201ENST00000325438 KRTAP23-1A1A580 65 aa9.85□□□□□ -0.83
PACS2-201ENST00000325438 MUC17Q685J3 4493 aa9.81□□□□□ -0.84
PACS2-201ENST00000325438 FAT4Q6V0I7 4981 aa9.79□□□□□ -0.84
PACS2-201ENST00000325438 KRTAP19-2Q3LHN2 52 aa9.77□□□□□ -0.85
PACS2-201ENST00000325438 SPRR5A0A1B0GTR4 108 aa9.75□□□□□ -0.85
PACS2-201ENST00000325438 INE1O15225 51 aa9.67□□□□□ -0.86
PACS2-201ENST00000325438 KRTAP12-3P60328 96 aa9.62□□□□□ -0.87
PACS2-201ENST00000325438 FLGP20930 4061 aaPredicted RBP9.61□□□□□ -0.87
PACS2-201ENST00000325438 KRTAP19-1Q8IUB9 90 aa9.59□□□□□ -0.87
PACS2-201ENST00000325438 KRTAP10-12P60413 245 aa9.55□□□□□ -0.88
PACS2-201ENST00000325438 SPRR2GQ9BYE4 73 aa9.55□□□□□ -0.88
PACS2-201ENST00000325438 PCLOQ9Y6V0 5065 aa9.45□□□□□ -0.9
PACS2-201ENST00000325438 RNF213Q63HN8 5207 aa9.45□□□□□ -0.9
PACS2-201ENST00000325438 MT1FP04733 61 aa9.42□□□□□ -0.9
PACS2-201ENST00000325438 HERC1Q15751 4861 aa9.41□□□□□ -0.9
PACS2-201ENST00000325438 MT2AP02795 61 aa9.35□□□□□ -0.91
PACS2-201ENST00000325438 KRTAP8-1Q8IUC2 63 aa9.35□□□□□ -0.91
PACS2-201ENST00000325438 MT1HP80294 61 aa9.31□□□□□ -0.92
PACS2-201ENST00000325438 HMCN2Q8NDA2 5059 aa9.29□□□□□ -0.92
PACS2-201ENST00000325438 LCE2CQ5TA81 110 aa9.26□□□□□ -0.93
PACS2-201ENST00000325438 KRTAP10-7P60409 375 aaPredicted RBP9.17□□□□□ -0.94
PACS2-201ENST00000325438 BIRC6Q9NR09 4857 aa9.16□□□□□ -0.94
PACS2-201ENST00000325438 MT1XP80297 61 aa9.1□□□□□ -0.95
PACS2-201ENST00000325438 UBR4Q5T4S7 5183 aa9.1□□□□□ -0.95
PACS2-201ENST00000325438 KRTAP10-5P60370 271 aa9.09□□□□□ -0.95
PACS2-201ENST00000325438 MT1BP07438 61 aa9.01□□□□□ -0.97
PACS2-201ENST00000325438 KRTAP9-8Q9BYQ0 159 aa8.97□□□□□ -0.97
PACS2-201ENST00000325438 KRTAP19-5Q3LI72 72 aa8.97□□□□□ -0.97
PACS2-201ENST00000325438 KRTAP19-8Q3LI54 63 aa8.91□□□□□ -0.98
PACS2-201ENST00000325438 LCE3CQ5T5A8 94 aa8.84□□□□□ -0.99
PACS2-201ENST00000325438 KMT2DO14686 5537 aa8.8□□□□□ -1
PACS2-201ENST00000325438 KRTAP4-8A0A0G2JLE6 195 aa8.71□□□□□ -1.01
PACS2-201ENST00000325438 KRTAP4-8Q9BYQ9 185 aa8.71□□□□□ -1.01
PACS2-201ENST00000325438 USH2AO75445 5202 aa8.7□□□□□ -1.02
PACS2-201ENST00000325438 CRCT1Q9UGL9 99 aa8.64□□□□□ -1.03
PACS2-201ENST00000325438 KRTAP4-7Q9BYR0 210 aa8.63□□□□□ -1.03
PACS2-201ENST00000325438 KRTAP9-3Q9BYQ3 159 aa8.55□□□□□ -1.04
PACS2-201ENST00000325438 FSIP2Q5CZC0 6907 aa8.41□□□□□ -1.06
PACS2-201ENST00000325438 KRTAP9-6A8MVA2 160 aa8.39□□□□□ -1.07
PACS2-201ENST00000325438 LCE2BO14633 110 aa8.31□□□□□ -1.08
PACS2-201ENST00000325438 SYNE1Q8NF91 8797 aaKnown RBP8.12□□□□□ -1.11
PACS2-201ENST00000325438 DSTQ03001 7570 aaKnown RBP8.11□□□□□ -1.11
PACS2-201ENST00000325438 OBSCNQ5VST9 7968 aa8.09□□□□□ -1.11
PACS2-201ENST00000325438 FCGBPQ9Y6R7 5405 aaPredicted RBP8.06□□□□□ -1.12
PACS2-201ENST00000325438 KRTAP19-7Q3SYF9 63 aa8.02□□□□□ -1.13
PACS2-201ENST00000325438 LOC100996750A0A140TA64 210 aa7.99□□□□□ -1.13
PACS2-201ENST00000325438 KRTAP2-3P0C7H8 128 aa7.99□□□□□ -1.13
PACS2-201ENST00000325438 KRTAP2-4Q9BYR9 128 aa7.99□□□□□ -1.13
PACS2-201ENST00000325438 KRTAP2-1Q9BYU5 128 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms