RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 KRTAP3-2Q9BYR7 98 aa8.51□□□□□ -1.05
PDE1C-201ENST00000321453 RPS29P62273 56 aaKnown RBP8.51□□□□□ -1.05
PDE1C-201ENST00000321453 SACSQ9NZJ4 4579 aa8.51□□□□□ -1.05
PDE1C-201ENST00000321453 KRTAP12-2P59991 146 aa8.49□□□□□ -1.05
PDE1C-201ENST00000321453 S4R3F8 94 aa8.48□□□□□ -1.05
PDE1C-201ENST00000321453 DYNC1H1Q14204 4646 aaKnown RBP8.43□□□□□ -1.06
PDE1C-201ENST00000321453 DNHD1Q96M86 4753 aa8.41□□□□□ -1.06
PDE1C-201ENST00000321453 KRTAP10-8P60410 259 aa8.41□□□□□ -1.06
PDE1C-201ENST00000321453 PKHD1L1Q86WI1 4243 aa8.4□□□□□ -1.06
PDE1C-201ENST00000321453 HSPG2P98160 4391 aa8.39□□□□□ -1.07
PDE1C-201ENST00000321453 MYCBP2O75592 4640 aa8.36□□□□□ -1.07
PDE1C-201ENST00000321453 APOBP04114 4563 aaKnown RBP8.34□□□□□ -1.07
PDE1C-201ENST00000321453 KRTAP12-1P59990 96 aa8.32□□□□□ -1.08
PDE1C-201ENST00000321453 LRP1Q07954 4544 aaKnown RBP8.26□□□□□ -1.09
PDE1C-201ENST00000321453 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
PDE1C-201ENST00000321453 XP32Q5T750 250 aa8.21□□□□□ -1.09
PDE1C-201ENST00000321453 KRTAP10-4P60372 401 aaPredicted RBP8.18□□□□□ -1.1
PDE1C-201ENST00000321453 KRTAP21-3Q3LHN1 58 aa8.16□□□□□ -1.1
PDE1C-201ENST00000321453 LPAP08519 4548 aa8.14□□□□□ -1.11
PDE1C-201ENST00000321453 A0A0A0MQY5 61 aa8.12□□□□□ -1.11
PDE1C-201ENST00000321453 TNXBP22105 4242 aa8.05□□□□□ -1.12
PDE1C-201ENST00000321453 M0QZ58 72 aa7.99□□□□□ -1.13
PDE1C-201ENST00000321453 LUZP6Q538Z0 58 aa7.99□□□□□ -1.13
PDE1C-201ENST00000321453 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
PDE1C-201ENST00000321453 KMT2CQ8NEZ4 4911 aaKnown RBP7.96□□□□□ -1.13
PDE1C-201ENST00000321453 LRP2P98164 4655 aa7.92□□□□□ -1.14
PDE1C-201ENST00000321453 A0A1B0GVY2 172 aa7.9□□□□□ -1.14
PDE1C-201ENST00000321453 R4GN34 69 aa7.88□□□□□ -1.15
PDE1C-201ENST00000321453 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
PDE1C-201ENST00000321453 Q5VSD8 79 aa7.76□□□□□ -1.17
PDE1C-201ENST00000321453 RYR2Q92736 4967 aa7.68□□□□□ -1.18
PDE1C-201ENST00000321453 KRTAP17-1Q9BYP8 105 aa7.63□□□□□ -1.19
PDE1C-201ENST00000321453 RYR1P21817 5038 aa7.62□□□□□ -1.19
PDE1C-201ENST00000321453 CAMK2N1Q7Z7J9 78 aa7.59□□□□□ -1.19
PDE1C-201ENST00000321453 MT1HL1P0DM35 61 aa7.55□□□□□ -1.2
PDE1C-201ENST00000321453 KIAA1109Q2LD37 5005 aa7.51□□□□□ -1.21
PDE1C-201ENST00000321453 ABCA13Q86UQ4 5058 aa7.5□□□□□ -1.21
PDE1C-201ENST00000321453 PP632Q6XCG6 107 aa7.46□□□□□ -1.22
PDE1C-201ENST00000321453 RYR3Q15413 4870 aa7.43□□□□□ -1.22
PDE1C-201ENST00000321453 MUC17Q685J3 4493 aa7.38□□□□□ -1.23
PDE1C-201ENST00000321453 J3QL48 77 aa7.38□□□□□ -1.23
PDE1C-201ENST00000321453 KRTAP4-1Q9BYQ7 146 aa7.32□□□□□ -1.24
PDE1C-201ENST00000321453 TNP1P09430 55 aa7.25□□□□□ -1.25
PDE1C-201ENST00000321453 MUC2Q02817 5179 aa7.24□□□□□ -1.25
PDE1C-201ENST00000321453 SEC61BP60468 96 aaKnown RBP7.19□□□□□ -1.26
PDE1C-201ENST00000321453 SPRR5A0A1B0GTR4 108 aa7.16□□□□□ -1.26
PDE1C-201ENST00000321453 EPPK1P58107 5090 aaKnown RBP7.11□□□□□ -1.27
PDE1C-201ENST00000321453 KRTAP4-5Q9BYR2 181 aa7.09□□□□□ -1.27
PDE1C-201ENST00000321453 KRTAP19-2Q3LHN2 52 aa7.07□□□□□ -1.28
PDE1C-201ENST00000321453 PCLOQ9Y6V0 5065 aa6.99□□□□□ -1.29
PDE1C-201ENST00000321453 FLGP20930 4061 aaPredicted RBP6.95□□□□□ -1.3
PDE1C-201ENST00000321453 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
PDE1C-201ENST00000321453 LCE3AQ5TA76 89 aa6.91□□□□□ -1.3
PDE1C-201ENST00000321453 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
PDE1C-201ENST00000321453 FAT4Q6V0I7 4981 aa6.84□□□□□ -1.31
PDE1C-201ENST00000321453 HERC1Q15751 4861 aa6.81□□□□□ -1.32
PDE1C-201ENST00000321453 HERC2O95714 4834 aa6.71□□□□□ -1.34
PDE1C-201ENST00000321453 INE1O15225 51 aa6.68□□□□□ -1.34
PDE1C-201ENST00000321453 KRTAP19-1Q8IUB9 90 aa6.67□□□□□ -1.34
PDE1C-201ENST00000321453 BIRC6Q9NR09 4857 aa6.64□□□□□ -1.35
PDE1C-201ENST00000321453 SPRR2GQ9BYE4 73 aa6.61□□□□□ -1.35
PDE1C-201ENST00000321453 M0R2T5 61 aa6.59□□□□□ -1.36
PDE1C-201ENST00000321453 HMCN2Q8NDA2 5059 aa6.57□□□□□ -1.36
PDE1C-201ENST00000321453 KRTAP8-1Q8IUC2 63 aa6.53□□□□□ -1.36
PDE1C-201ENST00000321453 UBR4Q5T4S7 5183 aa6.5□□□□□ -1.37
PDE1C-201ENST00000321453 KRTAP12-3P60328 96 aa6.48□□□□□ -1.37
PDE1C-201ENST00000321453 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
PDE1C-201ENST00000321453 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
PDE1C-201ENST00000321453 RNF213Q63HN8 5207 aa6.44□□□□□ -1.38
PDE1C-201ENST00000321453 MT1FP04733 61 aa6.42□□□□□ -1.38
PDE1C-201ENST00000321453 KRTAP10-12P60413 245 aa6.4□□□□□ -1.38
PDE1C-201ENST00000321453 KRTAP10-5P60370 271 aa6.36□□□□□ -1.39
PDE1C-201ENST00000321453 MT2AP02795 61 aa6.35□□□□□ -1.39
PDE1C-201ENST00000321453 MT1XP80297 61 aa6.34□□□□□ -1.39
PDE1C-201ENST00000321453 KRTAP10-7P60409 375 aaPredicted RBP6.32□□□□□ -1.4
PDE1C-201ENST00000321453 MT1HP80294 61 aa6.3□□□□□ -1.4
PDE1C-201ENST00000321453 MT1BP07438 61 aa6.25□□□□□ -1.41
PDE1C-201ENST00000321453 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
PDE1C-201ENST00000321453 KMT2DO14686 5537 aa6.2□□□□□ -1.42
PDE1C-201ENST00000321453 KRTAP19-8Q3LI54 63 aa6.2□□□□□ -1.42
PDE1C-201ENST00000321453 KRTAP19-5Q3LI72 72 aa6.11□□□□□ -1.43
PDE1C-201ENST00000321453 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.43
PDE1C-201ENST00000321453 KRTAP9-6A8MVA2 160 aa6.04□□□□□ -1.44
PDE1C-201ENST00000321453 USH2AO75445 5202 aa6□□□□□ -1.45
PDE1C-201ENST00000321453 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
PDE1C-201ENST00000321453 KRTAP4-8A0A0G2JLE6 195 aa5.91□□□□□ -1.46
PDE1C-201ENST00000321453 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
PDE1C-201ENST00000321453 KRTAP9-3Q9BYQ3 159 aa5.88□□□□□ -1.47
PDE1C-201ENST00000321453 KRTAP2-3P0C7H8 128 aa5.81□□□□□ -1.48
PDE1C-201ENST00000321453 KRTAP2-4Q9BYR9 128 aa5.81□□□□□ -1.48
PDE1C-201ENST00000321453 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
PDE1C-201ENST00000321453 LCE2BO14633 110 aa5.68□□□□□ -1.5
PDE1C-201ENST00000321453 KRTAP19-7Q3SYF9 63 aa5.63□□□□□ -1.51
PDE1C-201ENST00000321453 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
PDE1C-201ENST00000321453 MT1LQ93083 61 aa5.49□□□□□ -1.53
PDE1C-201ENST00000321453 CRCT1Q9UGL9 99 aa5.44□□□□□ -1.54
PDE1C-201ENST00000321453 KRTAP12-4P60329 112 aa5.43□□□□□ -1.54
PDE1C-201ENST00000321453 KRTAP4-3Q9BYR4 195 aa5.42□□□□□ -1.54
PDE1C-201ENST00000321453 MT1EP04732 61 aa5.41□□□□□ -1.54
PDE1C-201ENST00000321453 LCE2DQ5TA82 110 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms