RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 DNAH9Q9NYC9 4486 aa8.03□□□□□ -1.12
UBE2N-201ENST00000318066 CRCT1Q9UGL9 99 aa7.98□□□□□ -1.13
UBE2N-201ENST00000318066 AKAP9Q99996 3911 aa7.97□□□□□ -1.13
UBE2N-201ENST00000318066 DNAH5Q8TE73 4624 aa7.93□□□□□ -1.14
UBE2N-201ENST00000318066 ALMS1Q8TCU4 4167 aa7.87□□□□□ -1.15
UBE2N-201ENST00000318066 DNHD1Q96M86 4753 aa7.86□□□□□ -1.15
UBE2N-201ENST00000318066 LORP23490 312 aaPredicted RBP7.86□□□□□ -1.15
UBE2N-201ENST00000318066 PLECQ15149 4684 aaKnown RBP7.84□□□□□ -1.15
UBE2N-201ENST00000318066 DNAH1Q9P2D7 4330 aa7.79□□□□□ -1.16
UBE2N-201ENST00000318066 DNAH11Q96DT5 4516 aa7.78□□□□□ -1.16
UBE2N-201ENST00000318066 KRTAP8-1Q8IUC2 63 aa7.68□□□□□ -1.18
UBE2N-201ENST00000318066 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
UBE2N-201ENST00000318066 DNAH10Q8IVF4 4471 aa7.64□□□□□ -1.19
UBE2N-201ENST00000318066 VPS13DQ5THJ4 4388 aa7.63□□□□□ -1.19
UBE2N-201ENST00000318066 KRTAP19-4Q3LI73 84 aa7.59□□□□□ -1.19
UBE2N-201ENST00000318066 DNAH17Q9UFH2 4485 aa7.58□□□□□ -1.2
UBE2N-201ENST00000318066 DYNC1H1Q14204 4646 aaKnown RBP7.58□□□□□ -1.2
UBE2N-201ENST00000318066 SPRR2GQ9BYE4 73 aa7.55□□□□□ -1.2
UBE2N-201ENST00000318066 FAT1Q14517 4588 aa7.55□□□□□ -1.2
UBE2N-201ENST00000318066 STARD9Q9P2P6 4700 aa7.54□□□□□ -1.2
UBE2N-201ENST00000318066 LRP1BQ9NZR2 4599 aa7.5□□□□□ -1.21
UBE2N-201ENST00000318066 KRTAP4-1Q9BYQ7 146 aa7.48□□□□□ -1.21
UBE2N-201ENST00000318066 RYR1P21817 5038 aa7.44□□□□□ -1.22
UBE2N-201ENST00000318066 DNAH2Q9P225 4427 aa7.39□□□□□ -1.23
UBE2N-201ENST00000318066 MT1HP80294 61 aa7.39□□□□□ -1.23
UBE2N-201ENST00000318066 MT2AP02795 61 aa7.37□□□□□ -1.23
UBE2N-201ENST00000318066 PRKDCP78527 4128 aaKnown RBP7.37□□□□□ -1.23
UBE2N-201ENST00000318066 DNAH8Q96JB1 4490 aa7.33□□□□□ -1.24
UBE2N-201ENST00000318066 SACSQ9NZJ4 4579 aa7.31□□□□□ -1.24
UBE2N-201ENST00000318066 DYNC2H1Q8NCM8 4307 aaKnown RBP7.28□□□□□ -1.24
UBE2N-201ENST00000318066 FAT2Q9NYQ8 4349 aa7.27□□□□□ -1.24
UBE2N-201ENST00000318066 DNAH3Q8TD57 4116 aa7.25□□□□□ -1.25
UBE2N-201ENST00000318066 LCE3CQ5T5A8 94 aa7.25□□□□□ -1.25
UBE2N-201ENST00000318066 KMT2AQ03164 3969 aa7.21□□□□□ -1.26
UBE2N-201ENST00000318066 ANK2Q01484 3957 aa7.19□□□□□ -1.26
UBE2N-201ENST00000318066 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
UBE2N-201ENST00000318066 KRTAP19-5Q3LI72 72 aa7.18□□□□□ -1.26
UBE2N-201ENST00000318066 KIAA1109Q2LD37 5005 aa7.17□□□□□ -1.26
UBE2N-201ENST00000318066 APOBP04114 4563 aaKnown RBP7.15□□□□□ -1.26
UBE2N-201ENST00000318066 MT1FP04733 61 aa7.15□□□□□ -1.27
UBE2N-201ENST00000318066 LYSTQ99698 3801 aa7.12□□□□□ -1.27
UBE2N-201ENST00000318066 VPS13BQ7Z7G8 4022 aa7.09□□□□□ -1.27
UBE2N-201ENST00000318066 MYCBP2O75592 4640 aa7.09□□□□□ -1.28
UBE2N-201ENST00000318066 RYR3Q15413 4870 aa7.07□□□□□ -1.28
UBE2N-201ENST00000318066 KRTAP17-1Q9BYP8 105 aa7.05□□□□□ -1.28
UBE2N-201ENST00000318066 SPRR2FQ96RM1 72 aa7□□□□□ -1.29
UBE2N-201ENST00000318066 KRTAP19-8Q3LI54 63 aa7□□□□□ -1.29
UBE2N-201ENST00000318066 LRP1Q07954 4544 aaKnown RBP6.93□□□□□ -1.3
UBE2N-201ENST00000318066 SPRR5A0A1B0GTR4 108 aa6.92□□□□□ -1.3
UBE2N-201ENST00000318066 CMYA5Q8N3K9 4069 aa6.87□□□□□ -1.31
UBE2N-201ENST00000318066 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
UBE2N-201ENST00000318066 RYR2Q92736 4967 aa6.85□□□□□ -1.31
UBE2N-201ENST00000318066 KRTAP19-1Q8IUB9 90 aa6.83□□□□□ -1.32
UBE2N-201ENST00000318066 DNAH6Q9C0G6 4158 aa6.83□□□□□ -1.32
UBE2N-201ENST00000318066 FRAS1Q86XX4 4008 aa6.81□□□□□ -1.32
UBE2N-201ENST00000318066 HECTD4Q9Y4D8 3996 aa6.75□□□□□ -1.33
UBE2N-201ENST00000318066 DNAH7Q8WXX0 4024 aa6.74□□□□□ -1.33
UBE2N-201ENST00000318066 HERC2O95714 4834 aa6.73□□□□□ -1.33
UBE2N-201ENST00000318066 HYDINQ4G0P3 5121 aa6.68□□□□□ -1.34
UBE2N-201ENST00000318066 MT1XP80297 61 aa6.68□□□□□ -1.34
UBE2N-201ENST00000318066 LRP2P98164 4655 aa6.64□□□□□ -1.35
UBE2N-201ENST00000318066 KRTAP12-4P60329 112 aa6.62□□□□□ -1.35
UBE2N-201ENST00000318066 MT1BP07438 61 aa6.58□□□□□ -1.36
UBE2N-201ENST00000318066 MT1GP13640 62 aa6.57□□□□□ -1.36
UBE2N-201ENST00000318066 HSPG2P98160 4391 aa6.55□□□□□ -1.36
UBE2N-201ENST00000318066 BIRC6Q9NR09 4857 aa6.54□□□□□ -1.36
UBE2N-201ENST00000318066 PKHD1P08F94 4074 aa6.54□□□□□ -1.36
UBE2N-201ENST00000318066 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
UBE2N-201ENST00000318066 SPRR2EP22531 72 aa6.52□□□□□ -1.37
UBE2N-201ENST00000318066 SPRR2BP35325 72 aa6.52□□□□□ -1.37
UBE2N-201ENST00000318066 SPRR2AP35326 72 aa6.52□□□□□ -1.37
UBE2N-201ENST00000318066 KRTAP9-8Q9BYQ0 159 aa6.48□□□□□ -1.37
UBE2N-201ENST00000318066 HERC1Q15751 4861 aa6.46□□□□□ -1.38
UBE2N-201ENST00000318066 LCE2CQ5TA81 110 aa6.46□□□□□ -1.38
UBE2N-201ENST00000318066 PCLOQ9Y6V0 5065 aa6.45□□□□□ -1.38
UBE2N-201ENST00000318066 PKD1P98161 4303 aa6.43□□□□□ -1.38
UBE2N-201ENST00000318066 LCE3DQ9BYE3 92 aa6.42□□□□□ -1.38
UBE2N-201ENST00000318066 LCE2BO14633 110 aa6.4□□□□□ -1.39
UBE2N-201ENST00000318066 LCE3EQ5T5B0 92 aa6.38□□□□□ -1.39
UBE2N-201ENST00000318066 SPRR2DP22532 72 aa6.34□□□□□ -1.39
UBE2N-201ENST00000318066 KRTAP9-3Q9BYQ3 159 aa6.34□□□□□ -1.4
UBE2N-201ENST00000318066 LPAP08519 4548 aa6.33□□□□□ -1.4
UBE2N-201ENST00000318066 KMT2CQ8NEZ4 4911 aaKnown RBP6.33□□□□□ -1.4
UBE2N-201ENST00000318066 MT1LQ93083 61 aa6.27□□□□□ -1.41
UBE2N-201ENST00000318066 KRTAP4-8A0A0G2JLE6 195 aa6.24□□□□□ -1.41
UBE2N-201ENST00000318066 KRTAP4-8Q9BYQ9 185 aa6.24□□□□□ -1.41
UBE2N-201ENST00000318066 KRTAP19-2Q3LHN2 52 aa6.21□□□□□ -1.42
UBE2N-201ENST00000318066 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.42
UBE2N-201ENST00000318066 PKHD1L1Q86WI1 4243 aa6.17□□□□□ -1.42
UBE2N-201ENST00000318066 TNXBP22105 4242 aa6.1□□□□□ -1.43
UBE2N-201ENST00000318066 EPPK1P58107 5090 aaKnown RBP6.09□□□□□ -1.43
UBE2N-201ENST00000318066 ABCA13Q86UQ4 5058 aa6.09□□□□□ -1.43
UBE2N-201ENST00000318066 MUC17Q685J3 4493 aa6.08□□□□□ -1.44
UBE2N-201ENST00000318066 MT1EP04732 61 aa6.08□□□□□ -1.44
UBE2N-201ENST00000318066 FLGP20930 4061 aaPredicted RBP5.97□□□□□ -1.45
UBE2N-201ENST00000318066 MT3P25713 68 aa5.97□□□□□ -1.45
UBE2N-201ENST00000318066 MT1MQ8N339 61 aa5.89□□□□□ -1.47
UBE2N-201ENST00000318066 KRTAP4-7Q9BYR0 210 aa5.87□□□□□ -1.47
UBE2N-201ENST00000318066 FAT4Q6V0I7 4981 aa5.83□□□□□ -1.48
UBE2N-201ENST00000318066 LCE2DQ5TA82 110 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms