RNA–Protein interactions for RNA: ENST00000315266.9

GPHN-201, Transcript of gephyrin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPHN, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-201ENST00000315266 PKD1P98161 4303 aa5.28□□□□□ -1.56
GPHN-201ENST00000315266 XP32Q5T750 250 aa5.27□□□□□ -1.57
GPHN-201ENST00000315266 RPL37P61927 97 aaKnown RBP5.26□□□□□ -1.57
GPHN-201ENST00000315266 PKHD1P08F94 4074 aa5.26□□□□□ -1.57
GPHN-201ENST00000315266 H0YAA0 97 aa5.24□□□□□ -1.57
GPHN-201ENST00000315266 A8MUU9 505 aa5.23□□□□□ -1.57
GPHN-201ENST00000315266 KRTAP4-5Q9BYR2 181 aa5.23□□□□□ -1.57
GPHN-201ENST00000315266 M0QZ58 72 aa5.23□□□□□ -1.57
GPHN-201ENST00000315266 ROMO1P60602 79 aa5.23□□□□□ -1.57
GPHN-201ENST00000315266 VPS13BQ7Z7G8 4022 aa5.22□□□□□ -1.57
GPHN-201ENST00000315266 C20orf166-AS1Q96NR2 134 aa5.21□□□□□ -1.57
GPHN-201ENST00000315266 APOBP04114 4563 aaKnown RBP5.21□□□□□ -1.58
GPHN-201ENST00000315266 KRTAP25-1Q3LHN0 102 aa5.19□□□□□ -1.58
GPHN-201ENST00000315266 NDUFAF8A1L188 74 aa5.18□□□□□ -1.58
GPHN-201ENST00000315266 MT1HL1P0DM35 61 aa5.18□□□□□ -1.58
GPHN-201ENST00000315266 RYR3Q15413 4870 aa5.17□□□□□ -1.58
GPHN-201ENST00000315266 KIAA1109Q2LD37 5005 aa5.17□□□□□ -1.58
GPHN-201ENST00000315266 MYCBP2O75592 4640 aa5.15□□□□□ -1.59
GPHN-201ENST00000315266 TPRXLQ17RH7 258 aa5.13□□□□□ -1.59
GPHN-201ENST00000315266 RYR1P21817 5038 aa5.13□□□□□ -1.59
GPHN-201ENST00000315266 KRTAP3-1Q9BYR8 98 aa5.12□□□□□ -1.59
GPHN-201ENST00000315266 KRTAP17-1Q9BYP8 105 aa5.1□□□□□ -1.59
GPHN-201ENST00000315266 FAT3Q8TDW7 4589 aa5.1□□□□□ -1.59
GPHN-201ENST00000315266 HSPG2P98160 4391 aa5.08□□□□□ -1.6
GPHN-201ENST00000315266 C10orf95Q9H7T3 257 aa5.06□□□□□ -1.6
GPHN-201ENST00000315266 P0C880 135 aa5.04□□□□□ -1.6
GPHN-201ENST00000315266 EPPK1P58107 5090 aaKnown RBP5.03□□□□□ -1.6
GPHN-201ENST00000315266 LUZP6Q538Z0 58 aa5.01□□□□□ -1.61
GPHN-201ENST00000315266 LRP1Q07954 4544 aaKnown RBP5.01□□□□□ -1.61
GPHN-201ENST00000315266 PLAC4Q8WY50 150 aa4.98□□□□□ -1.61
GPHN-201ENST00000315266 BIRC6Q9NR09 4857 aa4.96□□□□□ -1.62
GPHN-201ENST00000315266 KRTAP13-4Q3LI77 160 aa4.93□□□□□ -1.62
GPHN-201ENST00000315266 KRTAP10-6P60371 365 aaPredicted RBP4.89□□□□□ -1.63
GPHN-201ENST00000315266 HERC2O95714 4834 aa4.88□□□□□ -1.63
GPHN-201ENST00000315266 KRTAP10-10P60014 251 aa4.87□□□□□ -1.63
GPHN-201ENST00000315266 KRTAP12-2P59991 146 aa4.87□□□□□ -1.63
GPHN-201ENST00000315266 PKHD1L1Q86WI1 4243 aa4.86□□□□□ -1.63
GPHN-201ENST00000315266 TNXBP22105 4242 aa4.84□□□□□ -1.63
GPHN-201ENST00000315266 KRTAP3-3Q9BYR6 98 aa4.83□□□□□ -1.64
GPHN-201ENST00000315266 KRTAP3-2Q9BYR7 98 aa4.8□□□□□ -1.64
GPHN-201ENST00000315266 ABCA13Q86UQ4 5058 aa4.79□□□□□ -1.64
GPHN-201ENST00000315266 LRP2P98164 4655 aa4.78□□□□□ -1.64
GPHN-201ENST00000315266 KRTAP12-1P59990 96 aa4.78□□□□□ -1.64
GPHN-201ENST00000315266 TNP1P09430 55 aa4.71□□□□□ -1.66
GPHN-201ENST00000315266 PCLOQ9Y6V0 5065 aa4.68□□□□□ -1.66
GPHN-201ENST00000315266 KRTAP4-1Q9BYQ7 146 aa4.65□□□□□ -1.66
GPHN-201ENST00000315266 LPAP08519 4548 aa4.63□□□□□ -1.67
GPHN-201ENST00000315266 LORP23490 312 aaPredicted RBP4.61□□□□□ -1.67
GPHN-201ENST00000315266 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
GPHN-201ENST00000315266 HERC1Q15751 4861 aa4.55□□□□□ -1.68
GPHN-201ENST00000315266 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
GPHN-201ENST00000315266 RNF213Q63HN8 5207 aa4.52□□□□□ -1.69
GPHN-201ENST00000315266 MUC2Q02817 5179 aa4.52□□□□□ -1.69
GPHN-201ENST00000315266 PP632Q6XCG6 107 aa4.49□□□□□ -1.69
GPHN-201ENST00000315266 HMCN2Q8NDA2 5059 aa4.45□□□□□ -1.7
GPHN-201ENST00000315266 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
GPHN-201ENST00000315266 MT1HP80294 61 aa4.39□□□□□ -1.71
GPHN-201ENST00000315266 MUC17Q685J3 4493 aa4.38□□□□□ -1.71
GPHN-201ENST00000315266 UBR4Q5T4S7 5183 aa4.36□□□□□ -1.71
GPHN-201ENST00000315266 KRTAP19-2Q3LHN2 52 aa4.36□□□□□ -1.71
GPHN-201ENST00000315266 FAT4Q6V0I7 4981 aa4.34□□□□□ -1.71
GPHN-201ENST00000315266 LCE2CQ5TA81 110 aa4.34□□□□□ -1.72
GPHN-201ENST00000315266 MT2AP02795 61 aa4.24□□□□□ -1.73
GPHN-201ENST00000315266 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
GPHN-201ENST00000315266 MT1FP04733 61 aa4.21□□□□□ -1.74
GPHN-201ENST00000315266 SPRR2GQ9BYE4 73 aa4.15□□□□□ -1.74
GPHN-201ENST00000315266 KRTAP9-8Q9BYQ0 159 aa4.15□□□□□ -1.74
GPHN-201ENST00000315266 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
GPHN-201ENST00000315266 CRCT1Q9UGL9 99 aa4.12□□□□□ -1.75
GPHN-201ENST00000315266 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
GPHN-201ENST00000315266 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.75
GPHN-201ENST00000315266 KRTAP19-1Q8IUB9 90 aa4.09□□□□□ -1.76
GPHN-201ENST00000315266 LCE2AQ5TA79 106 aaPredicted RBP4.06□□□□□ -1.76
GPHN-201ENST00000315266 LCE2DQ5TA82 110 aaPredicted RBP4.06□□□□□ -1.76
GPHN-201ENST00000315266 KRTAP9-3Q9BYQ3 159 aa4.01□□□□□ -1.77
GPHN-201ENST00000315266 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
GPHN-201ENST00000315266 KRTAP19-8Q3LI54 63 aa4.01□□□□□ -1.77
GPHN-201ENST00000315266 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
GPHN-201ENST00000315266 USH2AO75445 5202 aa3.97□□□□□ -1.77
GPHN-201ENST00000315266 MT1BP07438 61 aa3.94□□□□□ -1.78
GPHN-201ENST00000315266 LCE2BO14633 110 aa3.89□□□□□ -1.79
GPHN-201ENST00000315266 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
GPHN-201ENST00000315266 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
GPHN-201ENST00000315266 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
GPHN-201ENST00000315266 KRTAP4-8A0A0G2JLE6 195 aa3.86□□□□□ -1.79
GPHN-201ENST00000315266 KRTAP4-8Q9BYQ9 185 aa3.86□□□□□ -1.79
GPHN-201ENST00000315266 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
GPHN-201ENST00000315266 MT1XP80297 61 aa3.83□□□□□ -1.8
GPHN-201ENST00000315266 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
GPHN-201ENST00000315266 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
GPHN-201ENST00000315266 INE1O15225 51 aa3.8□□□□□ -1.8
GPHN-201ENST00000315266 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
GPHN-201ENST00000315266 SPRR2FQ96RM1 72 aa3.76□□□□□ -1.81
GPHN-201ENST00000315266 KMT2DO14686 5537 aa3.75□□□□□ -1.81
GPHN-201ENST00000315266 FCGBPQ9Y6R7 5405 aaPredicted RBP3.7□□□□□ -1.82
GPHN-201ENST00000315266 KRTAP19-6Q3LI70 58 aa3.67□□□□□ -1.82
GPHN-201ENST00000315266 KRTAP9-2Q9BYQ4 174 aa3.66□□□□□ -1.82
GPHN-201ENST00000315266 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
GPHN-201ENST00000315266 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
GPHN-201ENST00000315266 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms