RNA–Protein interactions for RNA: ENST00000315150.9

RAB43-201, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB43, Length 4,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-201ENST00000315150 KIAA1109Q2LD37 5005 aa9.06□□□□□ -0.96
RAB43-201ENST00000315150 DNAH8Q96JB1 4490 aa9.04□□□□□ -0.96
RAB43-201ENST00000315150 P0C880 135 aa9.03□□□□□ -0.96
RAB43-201ENST00000315150 DNAH17Q9UFH2 4485 aa9□□□□□ -0.97
RAB43-201ENST00000315150 RYR1P21817 5038 aa9□□□□□ -0.97
RAB43-201ENST00000315150 DNAH7Q8WXX0 4024 aa8.98□□□□□ -0.97
RAB43-201ENST00000315150 KRTAP3-1Q9BYR8 98 aa8.98□□□□□ -0.97
RAB43-201ENST00000315150 DNAH2Q9P225 4427 aa8.98□□□□□ -0.97
RAB43-201ENST00000315150 DNAH3Q8TD57 4116 aa8.96□□□□□ -0.97
RAB43-201ENST00000315150 MYCBP2O75592 4640 aa8.91□□□□□ -0.98
RAB43-201ENST00000315150 ALMS1Q8TCU4 4167 aa8.9□□□□□ -0.98
RAB43-201ENST00000315150 KRTAP10-10P60014 251 aa8.87□□□□□ -0.99
RAB43-201ENST00000315150 RYR3Q15413 4870 aa8.86□□□□□ -0.99
RAB43-201ENST00000315150 DNAH6Q9C0G6 4158 aa8.84□□□□□ -0.99
RAB43-201ENST00000315150 HYDINQ4G0P3 5121 aa8.84□□□□□ -0.99
RAB43-201ENST00000315150 DYNC2H1Q8NCM8 4307 aaKnown RBP8.82□□□□□ -1
RAB43-201ENST00000315150 VPS13BQ7Z7G8 4022 aa8.8□□□□□ -1
RAB43-201ENST00000315150 SACSQ9NZJ4 4579 aa8.79□□□□□ -1
RAB43-201ENST00000315150 FAT3Q8TDW7 4589 aa8.77□□□□□ -1.01
RAB43-201ENST00000315150 LRP1Q07954 4544 aaKnown RBP8.75□□□□□ -1.01
RAB43-201ENST00000315150 FRAS1Q86XX4 4008 aa8.75□□□□□ -1.01
RAB43-201ENST00000315150 KRTAP12-2P59991 146 aa8.74□□□□□ -1.01
RAB43-201ENST00000315150 KMT2CQ8NEZ4 4911 aaKnown RBP8.71□□□□□ -1.02
RAB43-201ENST00000315150 APOBP04114 4563 aaKnown RBP8.7□□□□□ -1.02
RAB43-201ENST00000315150 PKHD1P08F94 4074 aa8.7□□□□□ -1.02
RAB43-201ENST00000315150 KRTAP13-4Q3LI77 160 aa8.65□□□□□ -1.02
RAB43-201ENST00000315150 FAT2Q9NYQ8 4349 aa8.65□□□□□ -1.02
RAB43-201ENST00000315150 TNP1P09430 55 aa8.64□□□□□ -1.03
RAB43-201ENST00000315150 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
RAB43-201ENST00000315150 HECTD4Q9Y4D8 3996 aa8.57□□□□□ -1.04
RAB43-201ENST00000315150 RYR2Q92736 4967 aa8.55□□□□□ -1.04
RAB43-201ENST00000315150 KRTAP12-1P59990 96 aa8.54□□□□□ -1.04
RAB43-201ENST00000315150 KRTAP10-6P60371 365 aaPredicted RBP8.5□□□□□ -1.05
RAB43-201ENST00000315150 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
RAB43-201ENST00000315150 PP632Q6XCG6 107 aa8.44□□□□□ -1.06
RAB43-201ENST00000315150 HERC2O95714 4834 aa8.38□□□□□ -1.07
RAB43-201ENST00000315150 LRP2P98164 4655 aa8.33□□□□□ -1.08
RAB43-201ENST00000315150 KRTAP3-2Q9BYR7 98 aa8.32□□□□□ -1.08
RAB43-201ENST00000315150 KRTAP4-1Q9BYQ7 146 aa8.3□□□□□ -1.08
RAB43-201ENST00000315150 KRTAP15-1Q3LI76 137 aa8.27□□□□□ -1.09
RAB43-201ENST00000315150 EPPK1P58107 5090 aaKnown RBP8.21□□□□□ -1.09
RAB43-201ENST00000315150 HSPG2P98160 4391 aa8.2□□□□□ -1.1
RAB43-201ENST00000315150 PKD1P98161 4303 aa8.2□□□□□ -1.1
RAB43-201ENST00000315150 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
RAB43-201ENST00000315150 PRO2289Q9P1D8 64 aa8.15□□□□□ -1.11
RAB43-201ENST00000315150 LPAP08519 4548 aa8.01□□□□□ -1.13
RAB43-201ENST00000315150 BIRC6Q9NR09 4857 aa7.98□□□□□ -1.13
RAB43-201ENST00000315150 ABCA13Q86UQ4 5058 aa7.95□□□□□ -1.14
RAB43-201ENST00000315150 PCLOQ9Y6V0 5065 aa7.89□□□□□ -1.15
RAB43-201ENST00000315150 MT1HP80294 61 aa7.75□□□□□ -1.17
RAB43-201ENST00000315150 HERC1Q15751 4861 aa7.74□□□□□ -1.17
RAB43-201ENST00000315150 PKHD1L1Q86WI1 4243 aa7.7□□□□□ -1.18
RAB43-201ENST00000315150 RNF213Q63HN8 5207 aa7.64□□□□□ -1.19
RAB43-201ENST00000315150 MUC2Q02817 5179 aa7.63□□□□□ -1.19
RAB43-201ENST00000315150 TNXBP22105 4242 aa7.61□□□□□ -1.19
RAB43-201ENST00000315150 MT2AP02795 61 aa7.6□□□□□ -1.19
RAB43-201ENST00000315150 MT1FP04733 61 aa7.56□□□□□ -1.2
RAB43-201ENST00000315150 KRTAP10-12P60413 245 aa7.51□□□□□ -1.21
RAB43-201ENST00000315150 UBR4Q5T4S7 5183 aa7.49□□□□□ -1.21
RAB43-201ENST00000315150 FSIP2Q5CZC0 6907 aa7.46□□□□□ -1.21
RAB43-201ENST00000315150 FAT4Q6V0I7 4981 aa7.43□□□□□ -1.22
RAB43-201ENST00000315150 LCE3AQ5TA76 89 aa7.41□□□□□ -1.22
RAB43-201ENST00000315150 SPRR2GQ9BYE4 73 aa7.33□□□□□ -1.24
RAB43-201ENST00000315150 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
RAB43-201ENST00000315150 CRCT1Q9UGL9 99 aa7.32□□□□□ -1.24
RAB43-201ENST00000315150 INE1O15225 51 aa7.29□□□□□ -1.24
RAB43-201ENST00000315150 KRTAP12-3P60328 96 aa7.28□□□□□ -1.24
RAB43-201ENST00000315150 KRTAP19-1Q8IUB9 90 aa7.27□□□□□ -1.25
RAB43-201ENST00000315150 KRTAP19-2Q3LHN2 52 aa7.19□□□□□ -1.26
RAB43-201ENST00000315150 MUC17Q685J3 4493 aa7.18□□□□□ -1.26
RAB43-201ENST00000315150 HMCN2Q8NDA2 5059 aa7.17□□□□□ -1.26
RAB43-201ENST00000315150 KRTAP9-8Q9BYQ0 159 aa7.17□□□□□ -1.26
RAB43-201ENST00000315150 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.27
RAB43-201ENST00000315150 FLGP20930 4061 aaPredicted RBP7.04□□□□□ -1.28
RAB43-201ENST00000315150 KRTAP23-1A1A580 65 aa7□□□□□ -1.29
RAB43-201ENST00000315150 MT1BP07438 61 aa6.96□□□□□ -1.29
RAB43-201ENST00000315150 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
RAB43-201ENST00000315150 KRTAP19-8Q3LI54 63 aa6.92□□□□□ -1.3
RAB43-201ENST00000315150 KRTAP9-3Q9BYQ3 159 aa6.9□□□□□ -1.3
RAB43-201ENST00000315150 MT1XP80297 61 aa6.88□□□□□ -1.31
RAB43-201ENST00000315150 KRTAP19-5Q3LI72 72 aa6.83□□□□□ -1.32
RAB43-201ENST00000315150 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
RAB43-201ENST00000315150 SPRR2FQ96RM1 72 aa6.81□□□□□ -1.32
RAB43-201ENST00000315150 LCE2BO14633 110 aa6.8□□□□□ -1.32
RAB43-201ENST00000315150 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
RAB43-201ENST00000315150 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
RAB43-201ENST00000315150 USH2AO75445 5202 aa6.66□□□□□ -1.34
RAB43-201ENST00000315150 LCE2AQ5TA79 106 aaPredicted RBP6.55□□□□□ -1.36
RAB43-201ENST00000315150 SYNE1Q8NF91 8797 aaKnown RBP6.49□□□□□ -1.37
RAB43-201ENST00000315150 OBSCNQ5VST9 7968 aa6.47□□□□□ -1.37
RAB43-201ENST00000315150 LCE3CQ5T5A8 94 aa6.45□□□□□ -1.38
RAB43-201ENST00000315150 SPRR5A0A1B0GTR4 108 aa6.42□□□□□ -1.38
RAB43-201ENST00000315150 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
RAB43-201ENST00000315150 KMT2DO14686 5537 aa6.31□□□□□ -1.4
RAB43-201ENST00000315150 SPRR2EP22531 72 aa6.3□□□□□ -1.4
RAB43-201ENST00000315150 SPRR2BP35325 72 aa6.3□□□□□ -1.4
RAB43-201ENST00000315150 SPRR2AP35326 72 aa6.3□□□□□ -1.4
RAB43-201ENST00000315150 KRTAP9-2Q9BYQ4 174 aa6.3□□□□□ -1.4
RAB43-201ENST00000315150 DSTQ03001 7570 aaKnown RBP6.3□□□□□ -1.4
RAB43-201ENST00000315150 MT1GP13640 62 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms