RNA–Protein interactions for RNA: ENST00000315150.9

RAB43-201, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB43, Length 4,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-201ENST00000315150 NISCHQ9Y2I1 1504 aa33.89■■■■□ 3.02
RAB43-201ENST00000315150 DCAF8L2P0C7V8 631 aa32.88■■■□□ 2.85
RAB43-201ENST00000315150 SHROOM4Q9ULL8 1493 aa31.42■■■□□ 2.62
RAB43-201ENST00000315150 SUPT5HO00267 1087 aaKnown RBP31.19■■■□□ 2.58
RAB43-201ENST00000315150 EHMT2Q96KQ7 1210 aa29.88■■■□□ 2.37
RAB43-201ENST00000315150 FAM9AQ8IZU1 332 aaPredicted RBP29.3■■■□□ 2.28
RAB43-201ENST00000315150 ABCC9O60706 1549 aa29.1■■■□□ 2.25
RAB43-201ENST00000315150 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
RAB43-201ENST00000315150 TTBK1Q5TCY1 1321 aaPredicted RBP28.65■■■□□ 2.18
RAB43-201ENST00000315150 PABPN1Q86U42 306 aaKnown RBP eCLIP28.64■■■□□ 2.17
RAB43-201ENST00000315150 RANGAP1P46060 587 aaPredicted RBP28.57■■■□□ 2.16
RAB43-201ENST00000315150 PCGF6Q9BYE7 350 aa28.37■■■□□ 2.13
RAB43-201ENST00000315150 CHIC1Q5VXU3 224 aa28.33■■■□□ 2.13
RAB43-201ENST00000315150 LOC105371045A0A1W2PR82 267 aa28.25■■■□□ 2.11
RAB43-201ENST00000315150 PPARGC1BQ86YN6 1023 aaKnown RBP28.15■■■□□ 2.1
RAB43-201ENST00000315150 ZCCHC6Q5VYS8 1495 aaKnown RBP28.14■■■□□ 2.09
RAB43-201ENST00000315150 UBTFP17480 764 aaKnown RBP28.09■■■□□ 2.09
RAB43-201ENST00000315150 APLP2Q06481 763 aa28.02■■■□□ 2.08
RAB43-201ENST00000315150 CCDC180Q9P1Z9 1646 aa27.91■■■□□ 2.06
RAB43-201ENST00000315150 SCRIBQ14160 1630 aa27.85■■■□□ 2.05
RAB43-201ENST00000315150 ATP1B4Q9UN42 357 aaPredicted RBP27.84■■■□□ 2.05
RAB43-201ENST00000315150 CCER1Q8TC90 406 aaPredicted RBP27.35■■□□□ 1.97
RAB43-201ENST00000315150 TRIM26Q12899 539 aaPredicted RBP27.18■■□□□ 1.94
RAB43-201ENST00000315150 ITGAEP38570 1179 aa27.15■■□□□ 1.94
RAB43-201ENST00000315150 RSF1Q96T23 1441 aaPredicted RBP27.04■■□□□ 1.92
RAB43-201ENST00000315150 HNRNPUL2Q1KMD3 747 aaKnown RBP27.04■■□□□ 1.92
RAB43-201ENST00000315150 HRCP23327 699 aa27.02■■□□□ 1.92
RAB43-201ENST00000315150 RB1CC1Q8TDY2 1594 aa27.01■■□□□ 1.91
RAB43-201ENST00000315150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.97■■□□□ 1.91
RAB43-201ENST00000315150 PELP1Q8IZL8 1130 aaKnown RBP26.97■■□□□ 1.91
RAB43-201ENST00000315150 CECR2Q9BXF3 1484 aa26.95■■□□□ 1.91
RAB43-201ENST00000315150 NACADO15069 1562 aa26.9■■□□□ 1.9
RAB43-201ENST00000315150 CSRNP3Q8WYN3 585 aa26.82■■□□□ 1.88
RAB43-201ENST00000315150 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
RAB43-201ENST00000315150 P3H3Q8IVL6 736 aa26.74■■□□□ 1.87
RAB43-201ENST00000315150 ZEB1P37275 1124 aaPredicted RBP26.73■■□□□ 1.87
RAB43-201ENST00000315150 MYO15BQ96JP2 1530 aa26.73■■□□□ 1.87
RAB43-201ENST00000315150 FBLN2P98095 1184 aa26.71■■□□□ 1.87
RAB43-201ENST00000315150 CENPBP07199 599 aaPredicted RBP26.64■■□□□ 1.86
RAB43-201ENST00000315150 YTHDC1Q96MU7 727 aaKnown RBP26.62■■□□□ 1.85
RAB43-201ENST00000315150 ARID3CA6NKF2 412 aa26.59■■□□□ 1.85
RAB43-201ENST00000315150 MROH2BQ7Z745 1585 aa26.49■■□□□ 1.83
RAB43-201ENST00000315150 MYT1LQ9UL68 1186 aa26.49■■□□□ 1.83
RAB43-201ENST00000315150 FAM50AQ14320 339 aaKnown RBP26.46■■□□□ 1.83
RAB43-201ENST00000315150 BAZ1BQ9UIG0 1483 aaKnown RBP26.34■■□□□ 1.81
RAB43-201ENST00000315150 BAZ1AQ9NRL2 1556 aaPredicted RBP26.32■■□□□ 1.8
RAB43-201ENST00000315150 MYT1Q01538 1121 aa26.17■■□□□ 1.78
RAB43-201ENST00000315150 WRNQ14191 1432 aaPredicted RBP eCLIP26.15■■□□□ 1.78
RAB43-201ENST00000315150 CNGB1Q14028 1251 aaPredicted RBP26.14■■□□□ 1.78
RAB43-201ENST00000315150 WIZO95785 1651 aa26.12■■□□□ 1.77
RAB43-201ENST00000315150 NEUROD1Q13562 356 aa26.09■■□□□ 1.77
RAB43-201ENST00000315150 CCDC88BA6NC98 1476 aa26.08■■□□□ 1.77
RAB43-201ENST00000315150 POLR3GLQ9BT43 218 aa26.07■■□□□ 1.76
RAB43-201ENST00000315150 TRIM52Q96A61 297 aa26.02■■□□□ 1.76
RAB43-201ENST00000315150 SOGA1O94964 1423 aa26.01■■□□□ 1.75
RAB43-201ENST00000315150 ABCC8Q09428 1581 aa26■■□□□ 1.75
RAB43-201ENST00000315150 ZNF777Q9ULD5 760 aaPredicted RBP25.9■■□□□ 1.74
RAB43-201ENST00000315150 ERICH6Q7L0X2 663 aa25.89■■□□□ 1.74
RAB43-201ENST00000315150 CLIP1P30622 1438 aa25.87■■□□□ 1.73
RAB43-201ENST00000315150 CEP162Q5TB80 1403 aa25.84■■□□□ 1.73
RAB43-201ENST00000315150 DIEXFQ68CQ4 756 aaKnown RBP25.81■■□□□ 1.72
RAB43-201ENST00000315150 GTF3C3Q9Y5Q9 886 aa25.79■■□□□ 1.72
RAB43-201ENST00000315150 CHMP7Q8WUX9 453 aaPredicted RBP25.77■■□□□ 1.72
RAB43-201ENST00000315150 ATAD2BQ9ULI0 1458 aa25.73■■□□□ 1.71
RAB43-201ENST00000315150 ZNF326Q5BKZ1 582 aaKnown RBP25.72■■□□□ 1.71
RAB43-201ENST00000315150 CHIC2Q9UKJ5 165 aa25.71■■□□□ 1.71
RAB43-201ENST00000315150 GOLGA3Q08378 1498 aa25.7■■□□□ 1.7
RAB43-201ENST00000315150 KIF27Q86VH2 1401 aa25.67■■□□□ 1.7
RAB43-201ENST00000315150 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
RAB43-201ENST00000315150 TOP2AP11388 1531 aaKnown RBP25.64■■□□□ 1.7
RAB43-201ENST00000315150 EEA1Q15075 1411 aa25.63■■□□□ 1.69
RAB43-201ENST00000315150 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
RAB43-201ENST00000315150 TNIKQ9UKE5 1360 aa25.6■■□□□ 1.69
RAB43-201ENST00000315150 CUX2O14529 1486 aa25.59■■□□□ 1.69
RAB43-201ENST00000315150 RUSC2Q8N2Y8 1516 aa25.55■■□□□ 1.68
RAB43-201ENST00000315150 TDRD9Q8NDG6 1382 aaKnown RBP25.53■■□□□ 1.68
RAB43-201ENST00000315150 CEP164Q9UPV0 1460 aa25.52■■□□□ 1.68
RAB43-201ENST00000315150 CDK11AQ9UQ88 783 aaPredicted RBP25.52■■□□□ 1.68
RAB43-201ENST00000315150 NEFLP07196 543 aa25.5■■□□□ 1.67
RAB43-201ENST00000315150 ERCC6Q03468 1493 aa25.49■■□□□ 1.67
RAB43-201ENST00000315150 MTUS2Q5JR59 1369 aa25.49■■□□□ 1.67
RAB43-201ENST00000315150 CARMIL1Q5VZK9 1371 aa25.46■■□□□ 1.67
RAB43-201ENST00000315150 SLC4A1APQ9BWU0 796 aaKnown RBP25.46■■□□□ 1.67
RAB43-201ENST00000315150 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
RAB43-201ENST00000315150 ZNF316A6NFI3 1004 aaPredicted RBP25.43■■□□□ 1.66
RAB43-201ENST00000315150 SCAF1Q9H7N4 1312 aaKnown RBP25.38■■□□□ 1.65
RAB43-201ENST00000315150 RRP7BPQ9NSQ0 103 aa25.38■■□□□ 1.65
RAB43-201ENST00000315150 KCNH8Q96L42 1107 aa25.37■■□□□ 1.65
RAB43-201ENST00000315150 ACIN1Q9UKV3 1341 aaKnown RBP25.37■■□□□ 1.65
RAB43-201ENST00000315150 KANK4Q5T7N3 995 aaPredicted RBP25.34■■□□□ 1.65
RAB43-201ENST00000315150 HIRIP3Q9BW71 556 aaPredicted RBP25.33■■□□□ 1.65
RAB43-201ENST00000315150 DNAJC5BQ9UF47 199 aa25.3■■□□□ 1.64
RAB43-201ENST00000315150 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.28■■□□□ 1.64
RAB43-201ENST00000315150 PLPPR3Q6T4P5 718 aa25.27■■□□□ 1.64
RAB43-201ENST00000315150 NPM1P06748 294 aaKnown RBP eCLIP25.27■■□□□ 1.64
RAB43-201ENST00000315150 BCANQ96GW7 911 aa25.25■■□□□ 1.63
RAB43-201ENST00000315150 RAPGEF2Q9Y4G8 1499 aa25.23■■□□□ 1.63
RAB43-201ENST00000315150 PDS5BQ9NTI5 1447 aa25.21■■□□□ 1.63
RAB43-201ENST00000315150 EIF4G1Q04637 1599 aaKnown RBP25.21■■□□□ 1.63
RAB43-201ENST00000315150 PLEKHD1A6NEE1 506 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms