RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 SACSQ9NZJ4 4579 aa2.9□□□□□ -1.95
PRKDC-201ENST00000314191 KRTAP17-1Q9BYP8 105 aa2.89□□□□□ -1.95
PRKDC-201ENST00000314191 DNAH11Q96DT5 4516 aa2.87□□□□□ -1.95
PRKDC-201ENST00000314191 LORP23490 312 aaPredicted RBP2.84□□□□□ -1.96
PRKDC-201ENST00000314191 DNAH10Q8IVF4 4471 aa2.83□□□□□ -1.96
PRKDC-201ENST00000314191 KRTAP4-1Q9BYQ7 146 aa2.83□□□□□ -1.96
PRKDC-201ENST00000314191 RYR1P21817 5038 aa2.83□□□□□ -1.96
PRKDC-201ENST00000314191 KIAA1109Q2LD37 5005 aa2.83□□□□□ -1.96
PRKDC-201ENST00000314191 STARD9Q9P2P6 4700 aa2.82□□□□□ -1.96
PRKDC-201ENST00000314191 INE1O15225 51 aa2.82□□□□□ -1.96
PRKDC-201ENST00000314191 DNAH8Q96JB1 4490 aa2.82□□□□□ -1.96
PRKDC-201ENST00000314191 DNAH17Q9UFH2 4485 aa2.81□□□□□ -1.96
PRKDC-201ENST00000314191 AKAP9Q99996 3911 aa2.77□□□□□ -1.97
PRKDC-201ENST00000314191 DNAH1Q9P2D7 4330 aa2.76□□□□□ -1.97
PRKDC-201ENST00000314191 VPS13DQ5THJ4 4388 aa2.75□□□□□ -1.97
PRKDC-201ENST00000314191 DNAH2Q9P225 4427 aa2.75□□□□□ -1.97
PRKDC-201ENST00000314191 RYR3Q15413 4870 aa2.73□□□□□ -1.97
PRKDC-201ENST00000314191 CSMD3Q7Z407 3707 aa2.73□□□□□ -1.97
PRKDC-201ENST00000314191 RYR2Q92736 4967 aa2.72□□□□□ -1.97
PRKDC-201ENST00000314191 APOBP04114 4563 aaKnown RBP2.7□□□□□ -1.98
PRKDC-201ENST00000314191 KRTAP23-1A1A580 65 aa2.68□□□□□ -1.98
PRKDC-201ENST00000314191 ALMS1Q8TCU4 4167 aa2.66□□□□□ -1.98
PRKDC-201ENST00000314191 KRTAP15-1Q3LI76 137 aa2.65□□□□□ -1.98
PRKDC-201ENST00000314191 MT1HP80294 61 aa2.65□□□□□ -1.99
PRKDC-201ENST00000314191 FAT3Q8TDW7 4589 aa2.65□□□□□ -1.99
PRKDC-201ENST00000314191 HYDINQ4G0P3 5121 aa2.64□□□□□ -1.99
PRKDC-201ENST00000314191 DYNC2H1Q8NCM8 4307 aaKnown RBP2.64□□□□□ -1.99
PRKDC-201ENST00000314191 MT2AP02795 61 aa2.62□□□□□ -1.99
PRKDC-201ENST00000314191 LRP1Q07954 4544 aaKnown RBP2.62□□□□□ -1.99
PRKDC-201ENST00000314191 MYCBP2O75592 4640 aa2.62□□□□□ -1.99
PRKDC-201ENST00000314191 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
PRKDC-201ENST00000314191 BIRC6Q9NR09 4857 aa2.59□□□□□ -2
PRKDC-201ENST00000314191 MT1FP04733 61 aa2.58□□□□□ -2
PRKDC-201ENST00000314191 KMT2CQ8NEZ4 4911 aaKnown RBP2.58□□□□□ -2
PRKDC-201ENST00000314191 EPPK1P58107 5090 aaKnown RBP2.58□□□□□ -2
PRKDC-201ENST00000314191 KRTAP10-12P60413 245 aa2.57□□□□□ -2
PRKDC-201ENST00000314191 HERC2O95714 4834 aa2.57□□□□□ -2
PRKDC-201ENST00000314191 PRKDCP78527 4128 aaKnown RBP2.56□□□□□ -2
PRKDC-201ENST00000314191 SPRR2GQ9BYE4 73 aa2.55□□□□□ -2
PRKDC-201ENST00000314191 KRTAP19-4Q3LI73 84 aa2.55□□□□□ -2
PRKDC-201ENST00000314191 DNAH3Q8TD57 4116 aa2.54□□□□□ -2
PRKDC-201ENST00000314191 FAT2Q9NYQ8 4349 aa2.54□□□□□ -2
PRKDC-201ENST00000314191 KRTAP12-3P60328 96 aa2.53□□□□□ -2
PRKDC-201ENST00000314191 LCE2CQ5TA81 110 aa2.52□□□□□ -2.01
PRKDC-201ENST00000314191 HERC1Q15751 4861 aa2.52□□□□□ -2.01
PRKDC-201ENST00000314191 KRTAP19-1Q8IUB9 90 aa2.51□□□□□ -2.01
PRKDC-201ENST00000314191 LRP2P98164 4655 aa2.51□□□□□ -2.01
PRKDC-201ENST00000314191 KRTAP19-2Q3LHN2 52 aa2.49□□□□□ -2.01
PRKDC-201ENST00000314191 LPAP08519 4548 aa2.47□□□□□ -2.01
PRKDC-201ENST00000314191 ABCA13Q86UQ4 5058 aa2.46□□□□□ -2.02
PRKDC-201ENST00000314191 CMYA5Q8N3K9 4069 aa2.45□□□□□ -2.02
PRKDC-201ENST00000314191 KRTAP9-8Q9BYQ0 159 aa2.45□□□□□ -2.02
PRKDC-201ENST00000314191 KMT2AQ03164 3969 aa2.44□□□□□ -2.02
PRKDC-201ENST00000314191 CRCT1Q9UGL9 99 aa2.43□□□□□ -2.02
PRKDC-201ENST00000314191 KRTAP19-8Q3LI54 63 aa2.42□□□□□ -2.02
PRKDC-201ENST00000314191 HSPG2P98160 4391 aa2.42□□□□□ -2.02
PRKDC-201ENST00000314191 LYSTQ99698 3801 aa2.42□□□□□ -2.02
PRKDC-201ENST00000314191 MT1BP07438 61 aa2.42□□□□□ -2.02
PRKDC-201ENST00000314191 ANK2Q01484 3957 aa2.42□□□□□ -2.02
PRKDC-201ENST00000314191 HECTD4Q9Y4D8 3996 aa2.41□□□□□ -2.02
PRKDC-201ENST00000314191 FAT4Q6V0I7 4981 aa2.4□□□□□ -2.02
PRKDC-201ENST00000314191 KRTAP10-7P60409 375 aaPredicted RBP2.39□□□□□ -2.03
PRKDC-201ENST00000314191 KRTAP8-1Q8IUC2 63 aa2.39□□□□□ -2.03
PRKDC-201ENST00000314191 PKD1P98161 4303 aa2.38□□□□□ -2.03
PRKDC-201ENST00000314191 DNAH6Q9C0G6 4158 aa2.38□□□□□ -2.03
PRKDC-201ENST00000314191 KRTAP10-5P60370 271 aa2.37□□□□□ -2.03
PRKDC-201ENST00000314191 DNAH7Q8WXX0 4024 aa2.37□□□□□ -2.03
PRKDC-201ENST00000314191 MT1XP80297 61 aa2.36□□□□□ -2.03
PRKDC-201ENST00000314191 KRTAP9-3Q9BYQ3 159 aa2.36□□□□□ -2.03
PRKDC-201ENST00000314191 KRTAP19-5Q3LI72 72 aa2.35□□□□□ -2.03
PRKDC-201ENST00000314191 MT3P25713 68 aa2.33□□□□□ -2.04
PRKDC-201ENST00000314191 HMCN2Q8NDA2 5059 aa2.32□□□□□ -2.04
PRKDC-201ENST00000314191 PCLOQ9Y6V0 5065 aa2.31□□□□□ -2.04
PRKDC-201ENST00000314191 KRTAP4-8A0A0G2JLE6 195 aa2.31□□□□□ -2.04
PRKDC-201ENST00000314191 KRTAP4-8Q9BYQ9 185 aa2.31□□□□□ -2.04
PRKDC-201ENST00000314191 FRAS1Q86XX4 4008 aa2.31□□□□□ -2.04
PRKDC-201ENST00000314191 LCE2BO14633 110 aa2.3□□□□□ -2.04
PRKDC-201ENST00000314191 FLGP20930 4061 aaPredicted RBP2.3□□□□□ -2.04
PRKDC-201ENST00000314191 VPS13BQ7Z7G8 4022 aa2.29□□□□□ -2.04
PRKDC-201ENST00000314191 LCE3CQ5T5A8 94 aa2.27□□□□□ -2.05
PRKDC-201ENST00000314191 UBR4Q5T4S7 5183 aa2.27□□□□□ -2.05
PRKDC-201ENST00000314191 PKHD1P08F94 4074 aa2.24□□□□□ -2.05
PRKDC-201ENST00000314191 MUC17Q685J3 4493 aa2.24□□□□□ -2.05
PRKDC-201ENST00000314191 SPRR2FQ96RM1 72 aa2.24□□□□□ -2.05
PRKDC-201ENST00000314191 SPRR5A0A1B0GTR4 108 aa2.21□□□□□ -2.05
PRKDC-201ENST00000314191 PKHD1L1Q86WI1 4243 aa2.21□□□□□ -2.06
PRKDC-201ENST00000314191 MUC2Q02817 5179 aa2.2□□□□□ -2.06
PRKDC-201ENST00000314191 LCE2AQ5TA79 106 aaPredicted RBP2.2□□□□□ -2.06
PRKDC-201ENST00000314191 KRTAP4-7Q9BYR0 210 aa2.18□□□□□ -2.06
PRKDC-201ENST00000314191 RNF213Q63HN8 5207 aa2.15□□□□□ -2.06
PRKDC-201ENST00000314191 TNXBP22105 4242 aa2.15□□□□□ -2.06
PRKDC-201ENST00000314191 FSIP2Q5CZC0 6907 aa2.15□□□□□ -2.07
PRKDC-201ENST00000314191 MT1GP13640 62 aa2.13□□□□□ -2.07
PRKDC-201ENST00000314191 KRTAP19-6Q3LI70 58 aa2.1□□□□□ -2.07
PRKDC-201ENST00000314191 MT1EP04732 61 aa2.1□□□□□ -2.07
PRKDC-201ENST00000314191 MT1LQ93083 61 aa2.1□□□□□ -2.07
PRKDC-201ENST00000314191 SPRR2EP22531 72 aa2.07□□□□□ -2.08
PRKDC-201ENST00000314191 SPRR2BP35325 72 aa2.07□□□□□ -2.08
PRKDC-201ENST00000314191 SPRR2AP35326 72 aa2.07□□□□□ -2.08
PRKDC-201ENST00000314191 KRTAP19-7Q3SYF9 63 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms