RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 A0A0A0MQY5 61 aa7.32□□□□□ -1.24
CSNK1D-202ENST00000314028 DYNC2H1Q8NCM8 4307 aaKnown RBP7.28□□□□□ -1.24
CSNK1D-202ENST00000314028 HYDINQ4G0P3 5121 aa7.26□□□□□ -1.25
CSNK1D-202ENST00000314028 TPRXLQ17RH7 258 aa7.25□□□□□ -1.25
CSNK1D-202ENST00000314028 PKHD1P08F94 4074 aa7.25□□□□□ -1.25
CSNK1D-202ENST00000314028 KRTAP10-6P60371 365 aaPredicted RBP7.25□□□□□ -1.25
CSNK1D-202ENST00000314028 KRTAP12-2P59991 146 aa7.23□□□□□ -1.25
CSNK1D-202ENST00000314028 CAMK2N1Q7Z7J9 78 aa7.21□□□□□ -1.25
CSNK1D-202ENST00000314028 J3QL48 77 aa7.2□□□□□ -1.26
CSNK1D-202ENST00000314028 A0A1B0GVY2 172 aa7.19□□□□□ -1.26
CSNK1D-202ENST00000314028 DYNC1H1Q14204 4646 aaKnown RBP7.19□□□□□ -1.26
CSNK1D-202ENST00000314028 KRTAP3-3Q9BYR6 98 aa7.15□□□□□ -1.26
CSNK1D-202ENST00000314028 LRP1Q07954 4544 aaKnown RBP7.13□□□□□ -1.27
CSNK1D-202ENST00000314028 KRTAP10-4P60372 401 aaPredicted RBP7.11□□□□□ -1.27
CSNK1D-202ENST00000314028 KRTAP3-2Q9BYR7 98 aa7.1□□□□□ -1.27
CSNK1D-202ENST00000314028 FAT2Q9NYQ8 4349 aa7.09□□□□□ -1.27
CSNK1D-202ENST00000314028 FAT3Q8TDW7 4589 aa7.09□□□□□ -1.27
CSNK1D-202ENST00000314028 KRTAP12-1P59990 96 aa7.07□□□□□ -1.28
CSNK1D-202ENST00000314028 LUZP6Q538Z0 58 aa7.07□□□□□ -1.28
CSNK1D-202ENST00000314028 KRTAP15-1Q3LI76 137 aa7.03□□□□□ -1.28
CSNK1D-202ENST00000314028 SACSQ9NZJ4 4579 aa7.02□□□□□ -1.29
CSNK1D-202ENST00000314028 APOBP04114 4563 aaKnown RBP6.99□□□□□ -1.29
CSNK1D-202ENST00000314028 SEC61BP60468 96 aaKnown RBP6.98□□□□□ -1.29
CSNK1D-202ENST00000314028 KMT2CQ8NEZ4 4911 aaKnown RBP6.97□□□□□ -1.29
CSNK1D-202ENST00000314028 PKD1P98161 4303 aa6.93□□□□□ -1.3
CSNK1D-202ENST00000314028 KIAA1109Q2LD37 5005 aa6.89□□□□□ -1.31
CSNK1D-202ENST00000314028 KRTAP21-3Q3LHN1 58 aa6.88□□□□□ -1.31
CSNK1D-202ENST00000314028 PLAC4Q8WY50 150 aa6.87□□□□□ -1.31
CSNK1D-202ENST00000314028 RYR1P21817 5038 aa6.85□□□□□ -1.31
CSNK1D-202ENST00000314028 MT1HL1P0DM35 61 aa6.83□□□□□ -1.32
CSNK1D-202ENST00000314028 LRP2P98164 4655 aa6.82□□□□□ -1.32
CSNK1D-202ENST00000314028 HSPG2P98160 4391 aa6.82□□□□□ -1.32
CSNK1D-202ENST00000314028 M0R2T5 61 aa6.81□□□□□ -1.32
CSNK1D-202ENST00000314028 LORP23490 312 aaPredicted RBP6.73□□□□□ -1.33
CSNK1D-202ENST00000314028 RYR3Q15413 4870 aa6.72□□□□□ -1.33
CSNK1D-202ENST00000314028 KRTAP4-5Q9BYR2 181 aa6.7□□□□□ -1.34
CSNK1D-202ENST00000314028 KRTAP17-1Q9BYP8 105 aa6.66□□□□□ -1.34
CSNK1D-202ENST00000314028 TNP1P09430 55 aa6.62□□□□□ -1.35
CSNK1D-202ENST00000314028 PKHD1L1Q86WI1 4243 aa6.61□□□□□ -1.35
CSNK1D-202ENST00000314028 RYR2Q92736 4967 aa6.59□□□□□ -1.35
CSNK1D-202ENST00000314028 LPAP08519 4548 aa6.59□□□□□ -1.35
CSNK1D-202ENST00000314028 EPPK1P58107 5090 aaKnown RBP6.53□□□□□ -1.36
CSNK1D-202ENST00000314028 PP632Q6XCG6 107 aa6.52□□□□□ -1.37
CSNK1D-202ENST00000314028 KRTAP4-1Q9BYQ7 146 aa6.47□□□□□ -1.37
CSNK1D-202ENST00000314028 TNXBP22105 4242 aa6.44□□□□□ -1.38
CSNK1D-202ENST00000314028 ABCA13Q86UQ4 5058 aa6.34□□□□□ -1.39
CSNK1D-202ENST00000314028 MUC2Q02817 5179 aa6.32□□□□□ -1.4
CSNK1D-202ENST00000314028 KRTAP10-10P60014 251 aa6.31□□□□□ -1.4
CSNK1D-202ENST00000314028 HERC2O95714 4834 aa6.29□□□□□ -1.4
CSNK1D-202ENST00000314028 HERC1Q15751 4861 aa6.15□□□□□ -1.43
CSNK1D-202ENST00000314028 RNF213Q63HN8 5207 aa6.14□□□□□ -1.43
CSNK1D-202ENST00000314028 FAT4Q6V0I7 4981 aa6.05□□□□□ -1.44
CSNK1D-202ENST00000314028 LCE3AQ5TA76 89 aa6.04□□□□□ -1.44
CSNK1D-202ENST00000314028 PCLOQ9Y6V0 5065 aa6□□□□□ -1.45
CSNK1D-202ENST00000314028 UBR4Q5T4S7 5183 aa5.95□□□□□ -1.46
CSNK1D-202ENST00000314028 MUC17Q685J3 4493 aa5.87□□□□□ -1.47
CSNK1D-202ENST00000314028 BIRC6Q9NR09 4857 aa5.87□□□□□ -1.47
CSNK1D-202ENST00000314028 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
CSNK1D-202ENST00000314028 KRTAP19-2Q3LHN2 52 aa5.86□□□□□ -1.47
CSNK1D-202ENST00000314028 KRTAP10-12P60413 245 aa5.81□□□□□ -1.48
CSNK1D-202ENST00000314028 FLGP20930 4061 aaPredicted RBP5.8□□□□□ -1.48
CSNK1D-202ENST00000314028 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
CSNK1D-202ENST00000314028 KRTAP12-3P60328 96 aa5.79□□□□□ -1.48
CSNK1D-202ENST00000314028 MT1FP04733 61 aa5.78□□□□□ -1.48
CSNK1D-202ENST00000314028 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
CSNK1D-202ENST00000314028 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
CSNK1D-202ENST00000314028 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
CSNK1D-202ENST00000314028 MT1HP80294 61 aa5.76□□□□□ -1.49
CSNK1D-202ENST00000314028 MT2AP02795 61 aa5.74□□□□□ -1.49
CSNK1D-202ENST00000314028 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
CSNK1D-202ENST00000314028 HMCN2Q8NDA2 5059 aa5.67□□□□□ -1.5
CSNK1D-202ENST00000314028 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
CSNK1D-202ENST00000314028 INE1O15225 51 aa5.61□□□□□ -1.51
CSNK1D-202ENST00000314028 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
CSNK1D-202ENST00000314028 KRTAP8-1Q8IUC2 63 aa5.55□□□□□ -1.52
CSNK1D-202ENST00000314028 MT1XP80297 61 aa5.5□□□□□ -1.53
CSNK1D-202ENST00000314028 KRTAP9-8Q9BYQ0 159 aa5.49□□□□□ -1.53
CSNK1D-202ENST00000314028 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
CSNK1D-202ENST00000314028 MT1BP07438 61 aa5.47□□□□□ -1.53
CSNK1D-202ENST00000314028 USH2AO75445 5202 aa5.42□□□□□ -1.54
CSNK1D-202ENST00000314028 KRTAP19-5Q3LI72 72 aa5.42□□□□□ -1.54
CSNK1D-202ENST00000314028 KRTAP19-8Q3LI54 63 aa5.39□□□□□ -1.55
CSNK1D-202ENST00000314028 KMT2DO14686 5537 aa5.37□□□□□ -1.55
CSNK1D-202ENST00000314028 CRCT1Q9UGL9 99 aa5.36□□□□□ -1.55
CSNK1D-202ENST00000314028 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
CSNK1D-202ENST00000314028 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
CSNK1D-202ENST00000314028 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
CSNK1D-202ENST00000314028 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
CSNK1D-202ENST00000314028 KRTAP9-3Q9BYQ3 159 aa5.24□□□□□ -1.57
CSNK1D-202ENST00000314028 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
CSNK1D-202ENST00000314028 LCE2BO14633 110 aa5.13□□□□□ -1.59
CSNK1D-202ENST00000314028 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
CSNK1D-202ENST00000314028 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
CSNK1D-202ENST00000314028 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
CSNK1D-202ENST00000314028 KRTAP9-6A8MVA2 160 aa4.95□□□□□ -1.62
CSNK1D-202ENST00000314028 MT1GP13640 62 aa4.86□□□□□ -1.63
CSNK1D-202ENST00000314028 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
CSNK1D-202ENST00000314028 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
CSNK1D-202ENST00000314028 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
CSNK1D-202ENST00000314028 MT1LQ93083 61 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms