RNA–Protein interactions for RNA: ENST00000312521.8

NR1D2-201, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D2, Length 5,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-201ENST00000312521 KRTAP8-1Q8IUC2 63 aa7.82□□□□□ -1.16
NR1D2-201ENST00000312521 KRTAP10-5P60370 271 aa7.74□□□□□ -1.17
NR1D2-201ENST00000312521 ALMS1Q8TCU4 4167 aa7.66□□□□□ -1.18
NR1D2-201ENST00000312521 DNAH5Q8TE73 4624 aa7.64□□□□□ -1.19
NR1D2-201ENST00000312521 AKAP9Q99996 3911 aa7.63□□□□□ -1.19
NR1D2-201ENST00000312521 ZNF469Q96JG9 3925 aaPredicted RBP7.59□□□□□ -1.19
NR1D2-201ENST00000312521 KRTAP4-1Q9BYQ7 146 aa7.59□□□□□ -1.19
NR1D2-201ENST00000312521 PLECQ15149 4684 aaKnown RBP7.59□□□□□ -1.19
NR1D2-201ENST00000312521 MT1HP80294 61 aa7.54□□□□□ -1.2
NR1D2-201ENST00000312521 MT2AP02795 61 aa7.49□□□□□ -1.21
NR1D2-201ENST00000312521 DNAH10Q8IVF4 4471 aa7.48□□□□□ -1.21
NR1D2-201ENST00000312521 SPRR2GQ9BYE4 73 aa7.47□□□□□ -1.21
NR1D2-201ENST00000312521 FAT1Q14517 4588 aa7.44□□□□□ -1.22
NR1D2-201ENST00000312521 DNAH9Q9NYC9 4486 aa7.42□□□□□ -1.22
NR1D2-201ENST00000312521 DNAH11Q96DT5 4516 aa7.36□□□□□ -1.23
NR1D2-201ENST00000312521 DNAH2Q9P225 4427 aa7.32□□□□□ -1.24
NR1D2-201ENST00000312521 CSMD3Q7Z407 3707 aa7.32□□□□□ -1.24
NR1D2-201ENST00000312521 DNAH1Q9P2D7 4330 aa7.31□□□□□ -1.24
NR1D2-201ENST00000312521 MT1FP04733 61 aa7.3□□□□□ -1.24
NR1D2-201ENST00000312521 KRTAP10-7P60409 375 aaPredicted RBP7.25□□□□□ -1.25
NR1D2-201ENST00000312521 KRTAP19-5Q3LI72 72 aa7.24□□□□□ -1.25
NR1D2-201ENST00000312521 SPRR2FQ96RM1 72 aa7.24□□□□□ -1.25
NR1D2-201ENST00000312521 DNHD1Q96M86 4753 aa7.18□□□□□ -1.26
NR1D2-201ENST00000312521 DYNC1H1Q14204 4646 aaKnown RBP7.16□□□□□ -1.26
NR1D2-201ENST00000312521 LCE3CQ5T5A8 94 aa7.16□□□□□ -1.26
NR1D2-201ENST00000312521 RYR1P21817 5038 aa7.14□□□□□ -1.27
NR1D2-201ENST00000312521 KRTAP19-4Q3LI73 84 aa7.14□□□□□ -1.27
NR1D2-201ENST00000312521 DNAH17Q9UFH2 4485 aa7.11□□□□□ -1.27
NR1D2-201ENST00000312521 DNAH8Q96JB1 4490 aa7.11□□□□□ -1.27
NR1D2-201ENST00000312521 SACSQ9NZJ4 4579 aa7.07□□□□□ -1.28
NR1D2-201ENST00000312521 VPS13DQ5THJ4 4388 aa7.06□□□□□ -1.28
NR1D2-201ENST00000312521 LRP1BQ9NZR2 4599 aa7.05□□□□□ -1.28
NR1D2-201ENST00000312521 KRTAP19-8Q3LI54 63 aa6.92□□□□□ -1.3
NR1D2-201ENST00000312521 ANK2Q01484 3957 aa6.92□□□□□ -1.3
NR1D2-201ENST00000312521 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
NR1D2-201ENST00000312521 FAT2Q9NYQ8 4349 aa6.87□□□□□ -1.31
NR1D2-201ENST00000312521 APOBP04114 4563 aaKnown RBP6.87□□□□□ -1.31
NR1D2-201ENST00000312521 CMYA5Q8N3K9 4069 aa6.85□□□□□ -1.31
NR1D2-201ENST00000312521 DYNC2H1Q8NCM8 4307 aaKnown RBP6.82□□□□□ -1.32
NR1D2-201ENST00000312521 DNAH3Q8TD57 4116 aa6.81□□□□□ -1.32
NR1D2-201ENST00000312521 LRP1Q07954 4544 aaKnown RBP6.76□□□□□ -1.33
NR1D2-201ENST00000312521 FAT3Q8TDW7 4589 aa6.75□□□□□ -1.33
NR1D2-201ENST00000312521 SPRR2EP22531 72 aa6.75□□□□□ -1.33
NR1D2-201ENST00000312521 SPRR2BP35325 72 aa6.75□□□□□ -1.33
NR1D2-201ENST00000312521 SPRR2AP35326 72 aa6.75□□□□□ -1.33
NR1D2-201ENST00000312521 STARD9Q9P2P6 4700 aa6.75□□□□□ -1.33
NR1D2-201ENST00000312521 MT1XP80297 61 aa6.71□□□□□ -1.33
NR1D2-201ENST00000312521 RYR3Q15413 4870 aa6.71□□□□□ -1.33
NR1D2-201ENST00000312521 LYSTQ99698 3801 aa6.68□□□□□ -1.34
NR1D2-201ENST00000312521 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
NR1D2-201ENST00000312521 MT1BP07438 61 aa6.64□□□□□ -1.35
NR1D2-201ENST00000312521 KIAA1109Q2LD37 5005 aa6.62□□□□□ -1.35
NR1D2-201ENST00000312521 MYCBP2O75592 4640 aa6.61□□□□□ -1.35
NR1D2-201ENST00000312521 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
NR1D2-201ENST00000312521 MT1GP13640 62 aa6.59□□□□□ -1.36
NR1D2-201ENST00000312521 KRTAP17-1Q9BYP8 105 aa6.58□□□□□ -1.36
NR1D2-201ENST00000312521 KRTAP9-8Q9BYQ0 159 aa6.56□□□□□ -1.36
NR1D2-201ENST00000312521 KRTAP12-4P60329 112 aa6.56□□□□□ -1.36
NR1D2-201ENST00000312521 DNAH7Q8WXX0 4024 aa6.54□□□□□ -1.36
NR1D2-201ENST00000312521 SPRR2DP22532 72 aa6.54□□□□□ -1.36
NR1D2-201ENST00000312521 LCE2BO14633 110 aa6.53□□□□□ -1.36
NR1D2-201ENST00000312521 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
NR1D2-201ENST00000312521 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
NR1D2-201ENST00000312521 RYR2Q92736 4967 aa6.47□□□□□ -1.37
NR1D2-201ENST00000312521 PRKDCP78527 4128 aaKnown RBP6.45□□□□□ -1.38
NR1D2-201ENST00000312521 KRTAP9-3Q9BYQ3 159 aa6.43□□□□□ -1.38
NR1D2-201ENST00000312521 FRAS1Q86XX4 4008 aa6.42□□□□□ -1.38
NR1D2-201ENST00000312521 HERC1Q15751 4861 aa6.42□□□□□ -1.38
NR1D2-201ENST00000312521 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
NR1D2-201ENST00000312521 HECTD4Q9Y4D8 3996 aa6.4□□□□□ -1.39
NR1D2-201ENST00000312521 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
NR1D2-201ENST00000312521 KMT2AQ03164 3969 aa6.37□□□□□ -1.39
NR1D2-201ENST00000312521 LCE3DQ9BYE3 92 aa6.36□□□□□ -1.39
NR1D2-201ENST00000312521 PKD1P98161 4303 aa6.3□□□□□ -1.4
NR1D2-201ENST00000312521 LCE3EQ5T5B0 92 aa6.27□□□□□ -1.41
NR1D2-201ENST00000312521 HERC2O95714 4834 aa6.26□□□□□ -1.41
NR1D2-201ENST00000312521 HSPG2P98160 4391 aa6.25□□□□□ -1.41
NR1D2-201ENST00000312521 PCLOQ9Y6V0 5065 aa6.24□□□□□ -1.41
NR1D2-201ENST00000312521 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
NR1D2-201ENST00000312521 DNAH6Q9C0G6 4158 aa6.23□□□□□ -1.41
NR1D2-201ENST00000312521 MT1LQ93083 61 aa6.16□□□□□ -1.42
NR1D2-201ENST00000312521 LRP2P98164 4655 aa6.13□□□□□ -1.43
NR1D2-201ENST00000312521 EPPK1P58107 5090 aaKnown RBP6.11□□□□□ -1.43
NR1D2-201ENST00000312521 BIRC6Q9NR09 4857 aa6.1□□□□□ -1.43
NR1D2-201ENST00000312521 MT1EP04732 61 aa6.09□□□□□ -1.43
NR1D2-201ENST00000312521 KRTAP4-7Q9BYR0 210 aa6.09□□□□□ -1.44
NR1D2-201ENST00000312521 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
NR1D2-201ENST00000312521 HYDINQ4G0P3 5121 aa6.02□□□□□ -1.45
NR1D2-201ENST00000312521 LCE2DQ5TA82 110 aaPredicted RBP6.02□□□□□ -1.45
NR1D2-201ENST00000312521 KRTAP19-2Q3LHN2 52 aa6.01□□□□□ -1.45
NR1D2-201ENST00000312521 PKHD1L1Q86WI1 4243 aa5.94□□□□□ -1.46
NR1D2-201ENST00000312521 MT3P25713 68 aa5.92□□□□□ -1.46
NR1D2-201ENST00000312521 MT1MQ8N339 61 aa5.92□□□□□ -1.46
NR1D2-201ENST00000312521 PKHD1P08F94 4074 aa5.89□□□□□ -1.47
NR1D2-201ENST00000312521 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
NR1D2-201ENST00000312521 KRTAP19-6Q3LI70 58 aa5.84□□□□□ -1.47
NR1D2-201ENST00000312521 MUC17Q685J3 4493 aa5.83□□□□□ -1.48
NR1D2-201ENST00000312521 MT4P47944 62 aa5.77□□□□□ -1.49
NR1D2-201ENST00000312521 ABCA13Q86UQ4 5058 aa5.75□□□□□ -1.49
NR1D2-201ENST00000312521 LPAP08519 4548 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms