RNA–Protein interactions for RNA: ENST00000312123.13

GAPVD1-203, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GAPVD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-203ENST00000312123 KRTAP4-5Q9BYR2 181 aa3.27□□□□□ -1.89
GAPVD1-203ENST00000312123 DYNC2H1Q8NCM8 4307 aaKnown RBP3.25□□□□□ -1.89
GAPVD1-203ENST00000312123 ALMS1Q8TCU4 4167 aa3.24□□□□□ -1.89
GAPVD1-203ENST00000312123 PRKDCP78527 4128 aaKnown RBP3.23□□□□□ -1.89
GAPVD1-203ENST00000312123 VPS13DQ5THJ4 4388 aa3.2□□□□□ -1.9
GAPVD1-203ENST00000312123 DNAH11Q96DT5 4516 aa3.19□□□□□ -1.9
GAPVD1-203ENST00000312123 DNAH5Q8TE73 4624 aa3.18□□□□□ -1.9
GAPVD1-203ENST00000312123 DNAH6Q9C0G6 4158 aa3.18□□□□□ -1.9
GAPVD1-203ENST00000312123 DNAH10Q8IVF4 4471 aa3.18□□□□□ -1.9
GAPVD1-203ENST00000312123 PLECQ15149 4684 aaKnown RBP3.18□□□□□ -1.9
GAPVD1-203ENST00000312123 DNAH7Q8WXX0 4024 aa3.18□□□□□ -1.9
GAPVD1-203ENST00000312123 KRTAP15-1Q3LI76 137 aa3.17□□□□□ -1.9
GAPVD1-203ENST00000312123 LYSTQ99698 3801 aa3.17□□□□□ -1.9
GAPVD1-203ENST00000312123 LORP23490 312 aaPredicted RBP3.16□□□□□ -1.9
GAPVD1-203ENST00000312123 STARD9Q9P2P6 4700 aa3.15□□□□□ -1.9
GAPVD1-203ENST00000312123 FAT1Q14517 4588 aa3.14□□□□□ -1.91
GAPVD1-203ENST00000312123 DNAH8Q96JB1 4490 aa3.12□□□□□ -1.91
GAPVD1-203ENST00000312123 HECTD4Q9Y4D8 3996 aa3.12□□□□□ -1.91
GAPVD1-203ENST00000312123 DNAH17Q9UFH2 4485 aa3.1□□□□□ -1.91
GAPVD1-203ENST00000312123 DNAH2Q9P225 4427 aa3.08□□□□□ -1.92
GAPVD1-203ENST00000312123 MYCBP2O75592 4640 aa3.08□□□□□ -1.92
GAPVD1-203ENST00000312123 RYR1P21817 5038 aa3.07□□□□□ -1.92
GAPVD1-203ENST00000312123 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
GAPVD1-203ENST00000312123 SACSQ9NZJ4 4579 aa3.05□□□□□ -1.92
GAPVD1-203ENST00000312123 KMT2AQ03164 3969 aa3.03□□□□□ -1.92
GAPVD1-203ENST00000312123 LRP1BQ9NZR2 4599 aa3.02□□□□□ -1.93
GAPVD1-203ENST00000312123 CRCT1Q9UGL9 99 aa3.02□□□□□ -1.93
GAPVD1-203ENST00000312123 RYR2Q92736 4967 aa3.02□□□□□ -1.93
GAPVD1-203ENST00000312123 FRAS1Q86XX4 4008 aa3.02□□□□□ -1.93
GAPVD1-203ENST00000312123 KRTAP4-1Q9BYQ7 146 aa3.02□□□□□ -1.93
GAPVD1-203ENST00000312123 DYNC1H1Q14204 4646 aaKnown RBP3.02□□□□□ -1.93
GAPVD1-203ENST00000312123 LCE3AQ5TA76 89 aa3.01□□□□□ -1.93
GAPVD1-203ENST00000312123 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
GAPVD1-203ENST00000312123 KIAA1109Q2LD37 5005 aa3□□□□□ -1.93
GAPVD1-203ENST00000312123 FAT2Q9NYQ8 4349 aa2.97□□□□□ -1.93
GAPVD1-203ENST00000312123 HYDINQ4G0P3 5121 aa2.97□□□□□ -1.93
GAPVD1-203ENST00000312123 PKD1P98161 4303 aa2.97□□□□□ -1.93
GAPVD1-203ENST00000312123 FAT3Q8TDW7 4589 aa2.97□□□□□ -1.93
GAPVD1-203ENST00000312123 VPS13BQ7Z7G8 4022 aa2.94□□□□□ -1.94
GAPVD1-203ENST00000312123 KMT2CQ8NEZ4 4911 aaKnown RBP2.92□□□□□ -1.94
GAPVD1-203ENST00000312123 APOBP04114 4563 aaKnown RBP2.91□□□□□ -1.94
GAPVD1-203ENST00000312123 LRP1Q07954 4544 aaKnown RBP2.9□□□□□ -1.95
GAPVD1-203ENST00000312123 INE1O15225 51 aa2.89□□□□□ -1.95
GAPVD1-203ENST00000312123 KRTAP23-1A1A580 65 aa2.88□□□□□ -1.95
GAPVD1-203ENST00000312123 RYR3Q15413 4870 aa2.87□□□□□ -1.95
GAPVD1-203ENST00000312123 PKHD1P08F94 4074 aa2.84□□□□□ -1.95
GAPVD1-203ENST00000312123 MT2AP02795 61 aa2.84□□□□□ -1.95
GAPVD1-203ENST00000312123 BIRC6Q9NR09 4857 aa2.84□□□□□ -1.95
GAPVD1-203ENST00000312123 MT1HP80294 61 aa2.84□□□□□ -1.95
GAPVD1-203ENST00000312123 KRTAP17-1Q9BYP8 105 aa2.84□□□□□ -1.95
GAPVD1-203ENST00000312123 LCE2DQ5TA82 110 aaPredicted RBP2.84□□□□□ -1.96
GAPVD1-203ENST00000312123 HSPG2P98160 4391 aa2.83□□□□□ -1.96
GAPVD1-203ENST00000312123 PKHD1L1Q86WI1 4243 aa2.83□□□□□ -1.96
GAPVD1-203ENST00000312123 LRP2P98164 4655 aa2.82□□□□□ -1.96
GAPVD1-203ENST00000312123 MT1FP04733 61 aa2.81□□□□□ -1.96
GAPVD1-203ENST00000312123 SPRR2GQ9BYE4 73 aa2.8□□□□□ -1.96
GAPVD1-203ENST00000312123 KRTAP10-5P60370 271 aa2.79□□□□□ -1.96
GAPVD1-203ENST00000312123 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
GAPVD1-203ENST00000312123 EPPK1P58107 5090 aaKnown RBP2.78□□□□□ -1.97
GAPVD1-203ENST00000312123 HERC2O95714 4834 aa2.76□□□□□ -1.97
GAPVD1-203ENST00000312123 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
GAPVD1-203ENST00000312123 KRTAP19-1Q8IUB9 90 aa2.71□□□□□ -1.98
GAPVD1-203ENST00000312123 TNXBP22105 4242 aa2.7□□□□□ -1.98
GAPVD1-203ENST00000312123 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
GAPVD1-203ENST00000312123 PCLOQ9Y6V0 5065 aa2.69□□□□□ -1.98
GAPVD1-203ENST00000312123 KRTAP10-7P60409 375 aaPredicted RBP2.65□□□□□ -1.98
GAPVD1-203ENST00000312123 ABCA13Q86UQ4 5058 aa2.65□□□□□ -1.98
GAPVD1-203ENST00000312123 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
GAPVD1-203ENST00000312123 SPRR2FQ96RM1 72 aa2.62□□□□□ -1.99
GAPVD1-203ENST00000312123 FSIP2Q5CZC0 6907 aa2.6□□□□□ -1.99
GAPVD1-203ENST00000312123 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
GAPVD1-203ENST00000312123 KRTAP19-8Q3LI54 63 aa2.6□□□□□ -1.99
GAPVD1-203ENST00000312123 MT1XP80297 61 aa2.59□□□□□ -1.99
GAPVD1-203ENST00000312123 LPAP08519 4548 aa2.59□□□□□ -2
GAPVD1-203ENST00000312123 MT1BP07438 61 aa2.58□□□□□ -2
GAPVD1-203ENST00000312123 KRTAP4-8A0A0G2JLE6 195 aa2.57□□□□□ -2
GAPVD1-203ENST00000312123 KRTAP9-8Q9BYQ0 159 aa2.57□□□□□ -2
GAPVD1-203ENST00000312123 KRTAP4-8Q9BYQ9 185 aa2.57□□□□□ -2
GAPVD1-203ENST00000312123 HERC1Q15751 4861 aa2.56□□□□□ -2
GAPVD1-203ENST00000312123 LCE2CQ5TA81 110 aa2.56□□□□□ -2
GAPVD1-203ENST00000312123 UBR4Q5T4S7 5183 aa2.54□□□□□ -2
GAPVD1-203ENST00000312123 MUC17Q685J3 4493 aa2.54□□□□□ -2
GAPVD1-203ENST00000312123 HMCN2Q8NDA2 5059 aa2.5□□□□□ -2.01
GAPVD1-203ENST00000312123 KRTAP9-3Q9BYQ3 159 aa2.48□□□□□ -2.01
GAPVD1-203ENST00000312123 MT1GP13640 62 aa2.47□□□□□ -2.01
GAPVD1-203ENST00000312123 KRTAP19-2Q3LHN2 52 aa2.47□□□□□ -2.01
GAPVD1-203ENST00000312123 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.01
GAPVD1-203ENST00000312123 LCE3BQ5TA77 95 aa2.46□□□□□ -2.01
GAPVD1-203ENST00000312123 KRTAP4-7Q9BYR0 210 aa2.45□□□□□ -2.02
GAPVD1-203ENST00000312123 RNF213Q63HN8 5207 aa2.44□□□□□ -2.02
GAPVD1-203ENST00000312123 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
GAPVD1-203ENST00000312123 LCE2BO14633 110 aa2.42□□□□□ -2.02
GAPVD1-203ENST00000312123 MUC2Q02817 5179 aa2.4□□□□□ -2.03
GAPVD1-203ENST00000312123 FLGP20930 4061 aaPredicted RBP2.4□□□□□ -2.03
GAPVD1-203ENST00000312123 KRTAP19-4Q3LI73 84 aa2.39□□□□□ -2.03
GAPVD1-203ENST00000312123 SPRR2EP22531 72 aa2.38□□□□□ -2.03
GAPVD1-203ENST00000312123 SPRR2BP35325 72 aa2.38□□□□□ -2.03
GAPVD1-203ENST00000312123 SPRR2AP35326 72 aa2.38□□□□□ -2.03
GAPVD1-203ENST00000312123 FAT4Q6V0I7 4981 aa2.36□□□□□ -2.03
GAPVD1-203ENST00000312123 MT1LQ93083 61 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms