RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 KRTAP15-1Q3LI76 137 aa9.69□□□□□ -0.86
CHRNB1-201ENST00000306071 S4R3F8 94 aa9.65□□□□□ -0.87
CHRNB1-201ENST00000306071 PKHD1P08F94 4074 aa9.63□□□□□ -0.87
CHRNB1-201ENST00000306071 PKHD1L1Q86WI1 4243 aa9.61□□□□□ -0.87
CHRNB1-201ENST00000306071 KRTAP12-2P59991 146 aa9.59□□□□□ -0.87
CHRNB1-201ENST00000306071 FAT1Q14517 4588 aa9.5□□□□□ -0.89
CHRNB1-201ENST00000306071 KRTAP10-8P60410 259 aa9.49□□□□□ -0.89
CHRNB1-201ENST00000306071 APOBP04114 4563 aaKnown RBP9.48□□□□□ -0.89
CHRNB1-201ENST00000306071 KRTAP12-1P59990 96 aa9.46□□□□□ -0.9
CHRNB1-201ENST00000306071 KRTAP10-4P60372 401 aaPredicted RBP9.45□□□□□ -0.9
CHRNB1-201ENST00000306071 DYNC1H1Q14204 4646 aaKnown RBP9.44□□□□□ -0.9
CHRNB1-201ENST00000306071 XP32Q5T750 250 aa9.39□□□□□ -0.91
CHRNB1-201ENST00000306071 DNHD1Q96M86 4753 aa9.38□□□□□ -0.91
CHRNB1-201ENST00000306071 HSPG2P98160 4391 aa9.35□□□□□ -0.91
CHRNB1-201ENST00000306071 FAT3Q8TDW7 4589 aa9.33□□□□□ -0.92
CHRNB1-201ENST00000306071 LRP1Q07954 4544 aaKnown RBP9.29□□□□□ -0.92
CHRNB1-201ENST00000306071 M0QZ58 72 aa9.25□□□□□ -0.93
CHRNB1-201ENST00000306071 A0A1B0GVY2 172 aa9.17□□□□□ -0.94
CHRNB1-201ENST00000306071 MYCBP2O75592 4640 aa9.17□□□□□ -0.94
CHRNB1-201ENST00000306071 TNXBP22105 4242 aa9.16□□□□□ -0.94
CHRNB1-201ENST00000306071 PLAC4Q8WY50 150 aa9.07□□□□□ -0.96
CHRNB1-201ENST00000306071 A0A0A0MQY5 61 aa8.99□□□□□ -0.97
CHRNB1-201ENST00000306071 R4GN34 69 aa8.99□□□□□ -0.97
CHRNB1-201ENST00000306071 LPAP08519 4548 aa8.98□□□□□ -0.97
CHRNB1-201ENST00000306071 LUZP6Q538Z0 58 aa8.96□□□□□ -0.97
CHRNB1-201ENST00000306071 Q5VSD8 79 aa8.91□□□□□ -0.98
CHRNB1-201ENST00000306071 KMT2CQ8NEZ4 4911 aaKnown RBP8.86□□□□□ -0.99
CHRNB1-201ENST00000306071 LRP2P98164 4655 aa8.81□□□□□ -1
CHRNB1-201ENST00000306071 LORP23490 312 aaPredicted RBP8.74□□□□□ -1.01
CHRNB1-201ENST00000306071 RYR2Q92736 4967 aa8.72□□□□□ -1.01
CHRNB1-201ENST00000306071 MT1HL1P0DM35 61 aa8.69□□□□□ -1.02
CHRNB1-201ENST00000306071 PP632Q6XCG6 107 aa8.69□□□□□ -1.02
CHRNB1-201ENST00000306071 CAMK2N1Q7Z7J9 78 aa8.63□□□□□ -1.03
CHRNB1-201ENST00000306071 KRTAP17-1Q9BYP8 105 aa8.58□□□□□ -1.04
CHRNB1-201ENST00000306071 RYR1P21817 5038 aa8.52□□□□□ -1.05
CHRNB1-201ENST00000306071 KIAA1109Q2LD37 5005 aa8.38□□□□□ -1.07
CHRNB1-201ENST00000306071 SEC61BP60468 96 aaKnown RBP8.38□□□□□ -1.07
CHRNB1-201ENST00000306071 MUC17Q685J3 4493 aa8.37□□□□□ -1.07
CHRNB1-201ENST00000306071 ABCA13Q86UQ4 5058 aa8.34□□□□□ -1.07
CHRNB1-201ENST00000306071 RYR3Q15413 4870 aa8.32□□□□□ -1.08
CHRNB1-201ENST00000306071 TNP1P09430 55 aa8.31□□□□□ -1.08
CHRNB1-201ENST00000306071 KRTAP4-1Q9BYQ7 146 aa8.29□□□□□ -1.08
CHRNB1-201ENST00000306071 SPRR5A0A1B0GTR4 108 aa8.26□□□□□ -1.09
CHRNB1-201ENST00000306071 KRTAP21-3Q3LHN1 58 aa8.23□□□□□ -1.09
CHRNB1-201ENST00000306071 KRTAP23-1A1A580 65 aa8.2□□□□□ -1.1
CHRNB1-201ENST00000306071 KRTAP19-2Q3LHN2 52 aa8.15□□□□□ -1.11
CHRNB1-201ENST00000306071 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
CHRNB1-201ENST00000306071 MUC2Q02817 5179 aa7.92□□□□□ -1.14
CHRNB1-201ENST00000306071 FLGP20930 4061 aaPredicted RBP7.92□□□□□ -1.14
CHRNB1-201ENST00000306071 EPPK1P58107 5090 aaKnown RBP7.9□□□□□ -1.14
CHRNB1-201ENST00000306071 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.15
CHRNB1-201ENST00000306071 J3QL48 77 aa7.86□□□□□ -1.15
CHRNB1-201ENST00000306071 LCE3AQ5TA76 89 aa7.81□□□□□ -1.16
CHRNB1-201ENST00000306071 HERC1Q15751 4861 aa7.8□□□□□ -1.16
CHRNB1-201ENST00000306071 PCLOQ9Y6V0 5065 aa7.75□□□□□ -1.17
CHRNB1-201ENST00000306071 INE1O15225 51 aa7.73□□□□□ -1.17
CHRNB1-201ENST00000306071 SPRR2GQ9BYE4 73 aa7.69□□□□□ -1.18
CHRNB1-201ENST00000306071 KRTAP19-1Q8IUB9 90 aa7.64□□□□□ -1.19
CHRNB1-201ENST00000306071 BIRC6Q9NR09 4857 aa7.55□□□□□ -1.2
CHRNB1-201ENST00000306071 KRTAP8-1Q8IUC2 63 aa7.55□□□□□ -1.2
CHRNB1-201ENST00000306071 HERC2O95714 4834 aa7.53□□□□□ -1.2
CHRNB1-201ENST00000306071 FAT4Q6V0I7 4981 aa7.49□□□□□ -1.21
CHRNB1-201ENST00000306071 M0R2T5 61 aa7.47□□□□□ -1.21
CHRNB1-201ENST00000306071 LCE2CQ5TA81 110 aa7.45□□□□□ -1.22
CHRNB1-201ENST00000306071 KRTAP12-3P60328 96 aa7.4□□□□□ -1.22
CHRNB1-201ENST00000306071 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
CHRNB1-201ENST00000306071 MT1FP04733 61 aa7.31□□□□□ -1.24
CHRNB1-201ENST00000306071 KRTAP10-12P60413 245 aa7.31□□□□□ -1.24
CHRNB1-201ENST00000306071 HMCN2Q8NDA2 5059 aa7.3□□□□□ -1.24
CHRNB1-201ENST00000306071 KRTAP10-5P60370 271 aa7.28□□□□□ -1.24
CHRNB1-201ENST00000306071 MT2AP02795 61 aa7.27□□□□□ -1.25
CHRNB1-201ENST00000306071 MT1XP80297 61 aa7.25□□□□□ -1.25
CHRNB1-201ENST00000306071 MT1HP80294 61 aa7.24□□□□□ -1.25
CHRNB1-201ENST00000306071 UBR4Q5T4S7 5183 aa7.24□□□□□ -1.25
CHRNB1-201ENST00000306071 KRTAP19-8Q3LI54 63 aa7.23□□□□□ -1.25
CHRNB1-201ENST00000306071 MT1BP07438 61 aa7.16□□□□□ -1.26
CHRNB1-201ENST00000306071 KRTAP9-8Q9BYQ0 159 aa7.14□□□□□ -1.27
CHRNB1-201ENST00000306071 KRTAP10-7P60409 375 aaPredicted RBP7.13□□□□□ -1.27
CHRNB1-201ENST00000306071 RNF213Q63HN8 5207 aa7.04□□□□□ -1.28
CHRNB1-201ENST00000306071 LCE3CQ5T5A8 94 aa6.99□□□□□ -1.29
CHRNB1-201ENST00000306071 KRTAP19-5Q3LI72 72 aa6.93□□□□□ -1.3
CHRNB1-201ENST00000306071 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
CHRNB1-201ENST00000306071 KRTAP9-6A8MVA2 160 aa6.79□□□□□ -1.32
CHRNB1-201ENST00000306071 KRTAP2-3P0C7H8 128 aa6.69□□□□□ -1.34
CHRNB1-201ENST00000306071 KRTAP2-4Q9BYR9 128 aa6.69□□□□□ -1.34
CHRNB1-201ENST00000306071 KRTAP2-1Q9BYU5 128 aa6.69□□□□□ -1.34
CHRNB1-201ENST00000306071 KMT2DO14686 5537 aa6.69□□□□□ -1.34
CHRNB1-201ENST00000306071 KRTAP4-8A0A0G2JLE6 195 aa6.6□□□□□ -1.35
CHRNB1-201ENST00000306071 KRTAP4-8Q9BYQ9 185 aa6.6□□□□□ -1.35
CHRNB1-201ENST00000306071 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
CHRNB1-201ENST00000306071 USH2AO75445 5202 aa6.49□□□□□ -1.37
CHRNB1-201ENST00000306071 LCE2BO14633 110 aa6.48□□□□□ -1.37
CHRNB1-201ENST00000306071 KRTAP19-7Q3SYF9 63 aa6.44□□□□□ -1.38
CHRNB1-201ENST00000306071 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
CHRNB1-201ENST00000306071 MT1LQ93083 61 aa6.31□□□□□ -1.4
CHRNB1-201ENST00000306071 MT1EP04732 61 aa6.22□□□□□ -1.41
CHRNB1-201ENST00000306071 KRTAP12-4P60329 112 aa6.12□□□□□ -1.43
CHRNB1-201ENST00000306071 LOC100996750A0A140TA64 210 aa6.1□□□□□ -1.43
CHRNB1-201ENST00000306071 KRTAP4-3Q9BYR4 195 aa6.01□□□□□ -1.45
CHRNB1-201ENST00000306071 MT1GP13640 62 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms