RNA–Protein interactions for RNA: ENST00000304954.3

CSN3-201, Transcript of casein kappa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSN3, Length 836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3-201ENST00000304954 GCN1Q92616 2671 aaKnown RBP0.83□□□□□ -2.28
CSN3-201ENST00000304954 CACNA1AO00555 2505 aa0.83□□□□□ -2.28
CSN3-201ENST00000304954 TGP01266 2768 aa0.83□□□□□ -2.28
CSN3-201ENST00000304954 NBEAL2Q6ZNJ1 2754 aa0.83□□□□□ -2.28
CSN3-201ENST00000304954 EP400Q96L91 3159 aa0.83□□□□□ -2.28
CSN3-201ENST00000304954 VPS13AQ96RL7 3174 aa0.83□□□□□ -2.28
CSN3-201ENST00000304954 CENPFP49454 3210 aa0.83□□□□□ -2.28
CSN3-201ENST00000304954 DNAH11Q96DT5 4516 aa0.83□□□□□ -2.28
CSN3-201ENST00000304954 HIVEP1P15822 2718 aa0.82□□□□□ -2.28
CSN3-201ENST00000304954 DEFB4AO15263 64 aa0.82□□□□□ -2.28
CSN3-201ENST00000304954 CENPEQ02224 2701 aa0.82□□□□□ -2.28
CSN3-201ENST00000304954 ANKRD11Q6UB99 2663 aaPredicted RBP0.82□□□□□ -2.28
CSN3-201ENST00000304954 NBEAL1Q6ZS30 2694 aa0.82□□□□□ -2.28
CSN3-201ENST00000304954 ZFYVE26Q68DK2 2539 aa0.81□□□□□ -2.28
CSN3-201ENST00000304954 LAMA1P25391 3075 aa0.81□□□□□ -2.28
CSN3-201ENST00000304954 MYO18BQ8IUG5 2567 aa0.81□□□□□ -2.28
CSN3-201ENST00000304954 UTRNP46939 3433 aa0.81□□□□□ -2.28
CSN3-201ENST00000304954 MYCBP2O75592 4640 aa0.81□□□□□ -2.28
CSN3-201ENST00000304954 DMDP11532 3685 aa0.8□□□□□ -2.28
CSN3-201ENST00000304954 NBPF19A0A087WUL8 3843 aa0.8□□□□□ -2.28
CSN3-201ENST00000304954 SACSQ9NZJ4 4579 aa0.8□□□□□ -2.28
CSN3-201ENST00000304954 AKAP9Q99996 3911 aa0.8□□□□□ -2.28
CSN3-201ENST00000304954 DNAH8Q96JB1 4490 aa0.79□□□□□ -2.28
CSN3-201ENST00000304954 SPTAN1Q13813 2472 aaKnown RBP0.79□□□□□ -2.28
CSN3-201ENST00000304954 SZT2Q5T011 3432 aa0.79□□□□□ -2.28
CSN3-201ENST00000304954 USP9XQ93008 2570 aaPredicted RBP0.79□□□□□ -2.28
CSN3-201ENST00000304954 FREM2Q5SZK8 3169 aa0.79□□□□□ -2.28
CSN3-201ENST00000304954 ADGRG4Q8IZF6 3080 aa0.79□□□□□ -2.28
CSN3-201ENST00000304954 TLN2Q9Y4G6 2542 aa0.79□□□□□ -2.28
CSN3-201ENST00000304954 SMG1Q96Q15 3661 aaKnown RBP0.79□□□□□ -2.28
CSN3-201ENST00000304954 STAB1Q9NY15 2570 aa0.79□□□□□ -2.28
CSN3-201ENST00000304954 TEP1Q99973 2627 aaKnown RBP0.79□□□□□ -2.28
CSN3-201ENST00000304954 SPEGQ15772 3267 aa0.78□□□□□ -2.28
CSN3-201ENST00000304954 XIRP2A4UGR9 3374 aa0.78□□□□□ -2.28
CSN3-201ENST00000304954 DYNC2H1Q8NCM8 4307 aaKnown RBP0.78□□□□□ -2.28
CSN3-201ENST00000304954 DOPEY1Q5JWR5 2465 aa0.78□□□□□ -2.28
CSN3-201ENST00000304954 FLNBO75369 2602 aaKnown RBP0.78□□□□□ -2.29
CSN3-201ENST00000304954 CEP295Q9C0D2 2601 aa0.78□□□□□ -2.29
CSN3-201ENST00000304954 RELNP78509 3460 aa0.77□□□□□ -2.29
CSN3-201ENST00000304954 LYSTQ99698 3801 aa0.77□□□□□ -2.29
CSN3-201ENST00000304954 TLN1Q9Y490 2541 aaKnown RBP0.77□□□□□ -2.29
CSN3-201ENST00000304954 DCHS1Q96JQ0 3298 aa0.77□□□□□ -2.29
CSN3-201ENST00000304954 BSNQ9UPA5 3926 aa0.76□□□□□ -2.29
CSN3-201ENST00000304954 LAMA2P24043 3122 aaKnown RBP0.76□□□□□ -2.29
CSN3-201ENST00000304954 UNC79Q9P2D8 2635 aa0.76□□□□□ -2.29
CSN3-201ENST00000304954 ACACBO00763 2458 aa0.76□□□□□ -2.29
CSN3-201ENST00000304954 SPENQ96T58 3664 aaKnown RBP0.76□□□□□ -2.29
CSN3-201ENST00000304954 SPTBN5Q9NRC6 3674 aaKnown RBP0.76□□□□□ -2.29
CSN3-201ENST00000304954 WDFY3Q8IZQ1 3526 aa0.76□□□□□ -2.29
CSN3-201ENST00000304954 BRCA2P51587 3418 aa0.76□□□□□ -2.29
CSN3-201ENST00000304954 ANK2Q01484 3957 aa0.75□□□□□ -2.29
CSN3-201ENST00000304954 SMR3BP02814 79 aaPredicted RBP0.75□□□□□ -2.29
CSN3-201ENST00000304954 CSMD1Q96PZ7 3565 aa0.75□□□□□ -2.29
CSN3-201ENST00000304954 USP34Q70CQ2 3546 aa0.75□□□□□ -2.29
CSN3-201ENST00000304954 PRKDCP78527 4128 aaKnown RBP0.75□□□□□ -2.29
CSN3-201ENST00000304954 MUC3AQ02505 3323 aa0.75□□□□□ -2.29
CSN3-201ENST00000304954 KMT2AQ03164 3969 aa0.75□□□□□ -2.29
CSN3-201ENST00000304954 DNAH3Q8TD57 4116 aa0.74□□□□□ -2.29
CSN3-201ENST00000304954 FLNAP21333 2647 aaKnown RBP0.74□□□□□ -2.29
CSN3-201ENST00000304954 UNC80Q8N2C7 3258 aa0.74□□□□□ -2.29
CSN3-201ENST00000304954 LAMA5O15230 3695 aa0.74□□□□□ -2.29
CSN3-201ENST00000304954 LAMA3Q16787 3333 aa0.74□□□□□ -2.29
CSN3-201ENST00000304954 DNAH14Q0VDD8 3507 aa0.73□□□□□ -2.29
CSN3-201ENST00000304954 VCANP13611 3396 aa0.73□□□□□ -2.29
CSN3-201ENST00000304954 MYO9AB2RTY4 2548 aa0.73□□□□□ -2.29
CSN3-201ENST00000304954 FASNP49327 2511 aaKnown RBP0.73□□□□□ -2.29
CSN3-201ENST00000304954 PRM1P04553 51 aa0.73□□□□□ -2.29
CSN3-201ENST00000304954 MT1AP04731 61 aa0.73□□□□□ -2.29
CSN3-201ENST00000304954 SVEP1Q4LDE5 3571 aa0.72□□□□□ -2.29
CSN3-201ENST00000304954 KRTAP19-3Q7Z4W3 81 aa0.72□□□□□ -2.29
CSN3-201ENST00000304954 VPS13BQ7Z7G8 4022 aa0.72□□□□□ -2.29
CSN3-201ENST00000304954 FRAS1Q86XX4 4008 aa0.72□□□□□ -2.29
CSN3-201ENST00000304954 DNAH2Q9P225 4427 aa0.71□□□□□ -2.3
CSN3-201ENST00000304954 MAST4O15021 2626 aa0.71□□□□□ -2.3
CSN3-201ENST00000304954 ANK3Q12955 4377 aaKnown RBP0.71□□□□□ -2.3
CSN3-201ENST00000304954 DNAH1Q9P2D7 4330 aa0.71□□□□□ -2.3
CSN3-201ENST00000304954 CDH23Q9H251 3354 aa0.71□□□□□ -2.3
CSN3-201ENST00000304954 MYO15AQ9UKN7 3530 aa0.7□□□□□ -2.3
CSN3-201ENST00000304954 PKD1P98161 4303 aa0.7□□□□□ -2.3
CSN3-201ENST00000304954 FAT2Q9NYQ8 4349 aa0.7□□□□□ -2.3
CSN3-201ENST00000304954 DNAH10Q8IVF4 4471 aa0.7□□□□□ -2.3
CSN3-201ENST00000304954 STAB2Q8WWQ8 2551 aa0.7□□□□□ -2.3
CSN3-201ENST00000304954 ASPMQ8IZT6 3477 aa0.7□□□□□ -2.3
CSN3-201ENST00000304954 LOC400499M0QZD8 3231 aa0.7□□□□□ -2.3
CSN3-201ENST00000304954 DNAH9Q9NYC9 4486 aa0.69□□□□□ -2.3
CSN3-201ENST00000304954 IGSF10Q6WRI0 2623 aa0.69□□□□□ -2.3
CSN3-201ENST00000304954 TNXBP22105 4242 aa0.69□□□□□ -2.3
CSN3-201ENST00000304954 MGAM2Q2M2H8 2515 aa0.69□□□□□ -2.3
CSN3-201ENST00000304954 VPS13CQ709C8 3753 aa0.69□□□□□ -2.3
CSN3-201ENST00000304954 FLGP20930 4061 aaPredicted RBP0.68□□□□□ -2.3
CSN3-201ENST00000304954 KRTAP19-5Q3LI72 72 aa0.68□□□□□ -2.3
CSN3-201ENST00000304954 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
CSN3-201ENST00000304954 PKHD1L1Q86WI1 4243 aa0.68□□□□□ -2.3
CSN3-201ENST00000304954 CMYA5Q8N3K9 4069 aa0.68□□□□□ -2.3
CSN3-201ENST00000304954 CSMD2Q7Z408 3487 aa0.68□□□□□ -2.3
CSN3-201ENST00000304954 EYSQ5T1H1 3165 aa0.67□□□□□ -2.3
CSN3-201ENST00000304954 TRRAPQ9Y4A5 3859 aa0.67□□□□□ -2.3
CSN3-201ENST00000304954 CUBNO60494 3623 aa0.67□□□□□ -2.3
CSN3-201ENST00000304954 FAT3Q8TDW7 4589 aa0.67□□□□□ -2.3
CSN3-201ENST00000304954 HSPG2P98160 4391 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms