RNA–Protein interactions for RNA: ENST00000300305.7

RUNX1-201, Transcript of runt related transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX1, Length 6,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-201ENST00000300305 KRTAP10-5P60370 271 aa7□□□□□ -1.29
RUNX1-201ENST00000300305 ALMS1Q8TCU4 4167 aa6.95□□□□□ -1.3
RUNX1-201ENST00000300305 AKAP9Q99996 3911 aa6.91□□□□□ -1.3
RUNX1-201ENST00000300305 ZNF469Q96JG9 3925 aaPredicted RBP6.86□□□□□ -1.31
RUNX1-201ENST00000300305 DNAH9Q9NYC9 4486 aa6.8□□□□□ -1.32
RUNX1-201ENST00000300305 KRTAP8-1Q8IUC2 63 aa6.77□□□□□ -1.33
RUNX1-201ENST00000300305 DNAH1Q9P2D7 4330 aa6.72□□□□□ -1.33
RUNX1-201ENST00000300305 DNAH5Q8TE73 4624 aa6.64□□□□□ -1.35
RUNX1-201ENST00000300305 DNAH10Q8IVF4 4471 aa6.61□□□□□ -1.35
RUNX1-201ENST00000300305 KRTAP4-1Q9BYQ7 146 aa6.59□□□□□ -1.35
RUNX1-201ENST00000300305 PLECQ15149 4684 aaKnown RBP6.57□□□□□ -1.36
RUNX1-201ENST00000300305 DNAH2Q9P225 4427 aa6.51□□□□□ -1.37
RUNX1-201ENST00000300305 DNAH11Q96DT5 4516 aa6.5□□□□□ -1.37
RUNX1-201ENST00000300305 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
RUNX1-201ENST00000300305 MT1HP80294 61 aa6.45□□□□□ -1.38
RUNX1-201ENST00000300305 DNAH3Q8TD57 4116 aa6.37□□□□□ -1.39
RUNX1-201ENST00000300305 DNAH17Q9UFH2 4485 aa6.37□□□□□ -1.39
RUNX1-201ENST00000300305 ANK2Q01484 3957 aa6.36□□□□□ -1.39
RUNX1-201ENST00000300305 VPS13DQ5THJ4 4388 aa6.35□□□□□ -1.39
RUNX1-201ENST00000300305 KRTAP19-5Q3LI72 72 aa6.35□□□□□ -1.39
RUNX1-201ENST00000300305 SPRR2FQ96RM1 72 aa6.35□□□□□ -1.39
RUNX1-201ENST00000300305 MT2AP02795 61 aa6.32□□□□□ -1.4
RUNX1-201ENST00000300305 DNAH8Q96JB1 4490 aa6.32□□□□□ -1.4
RUNX1-201ENST00000300305 STARD9Q9P2P6 4700 aa6.32□□□□□ -1.4
RUNX1-201ENST00000300305 LRP1BQ9NZR2 4599 aa6.31□□□□□ -1.4
RUNX1-201ENST00000300305 FAT2Q9NYQ8 4349 aa6.29□□□□□ -1.4
RUNX1-201ENST00000300305 KMT2AQ03164 3969 aa6.27□□□□□ -1.41
RUNX1-201ENST00000300305 FAT1Q14517 4588 aa6.27□□□□□ -1.41
RUNX1-201ENST00000300305 FRAS1Q86XX4 4008 aa6.26□□□□□ -1.41
RUNX1-201ENST00000300305 MT1FP04733 61 aa6.24□□□□□ -1.41
RUNX1-201ENST00000300305 DYNC1H1Q14204 4646 aaKnown RBP6.24□□□□□ -1.41
RUNX1-201ENST00000300305 VPS13BQ7Z7G8 4022 aa6.22□□□□□ -1.41
RUNX1-201ENST00000300305 DNHD1Q96M86 4753 aa6.21□□□□□ -1.41
RUNX1-201ENST00000300305 KRTAP10-7P60409 375 aaPredicted RBP6.21□□□□□ -1.41
RUNX1-201ENST00000300305 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
RUNX1-201ENST00000300305 SPRR2GQ9BYE4 73 aa6.17□□□□□ -1.42
RUNX1-201ENST00000300305 SACSQ9NZJ4 4579 aa6.16□□□□□ -1.42
RUNX1-201ENST00000300305 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
RUNX1-201ENST00000300305 LYSTQ99698 3801 aa6.12□□□□□ -1.43
RUNX1-201ENST00000300305 PRKDCP78527 4128 aaKnown RBP6.12□□□□□ -1.43
RUNX1-201ENST00000300305 CMYA5Q8N3K9 4069 aa6.08□□□□□ -1.44
RUNX1-201ENST00000300305 RYR1P21817 5038 aa6.08□□□□□ -1.44
RUNX1-201ENST00000300305 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
RUNX1-201ENST00000300305 APOBP04114 4563 aaKnown RBP6.02□□□□□ -1.45
RUNX1-201ENST00000300305 DNAH7Q8WXX0 4024 aa5.96□□□□□ -1.45
RUNX1-201ENST00000300305 SPRR2EP22531 72 aa5.95□□□□□ -1.46
RUNX1-201ENST00000300305 SPRR2BP35325 72 aa5.95□□□□□ -1.46
RUNX1-201ENST00000300305 SPRR2AP35326 72 aa5.95□□□□□ -1.46
RUNX1-201ENST00000300305 KRTAP17-1Q9BYP8 105 aa5.94□□□□□ -1.46
RUNX1-201ENST00000300305 MT1GP13640 62 aa5.91□□□□□ -1.46
RUNX1-201ENST00000300305 DNAH6Q9C0G6 4158 aa5.9□□□□□ -1.47
RUNX1-201ENST00000300305 MYCBP2O75592 4640 aa5.85□□□□□ -1.47
RUNX1-201ENST00000300305 HECTD4Q9Y4D8 3996 aa5.8□□□□□ -1.48
RUNX1-201ENST00000300305 RYR3Q15413 4870 aa5.77□□□□□ -1.49
RUNX1-201ENST00000300305 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
RUNX1-201ENST00000300305 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
RUNX1-201ENST00000300305 KRTAP19-1Q8IUB9 90 aa5.76□□□□□ -1.49
RUNX1-201ENST00000300305 FAT3Q8TDW7 4589 aa5.76□□□□□ -1.49
RUNX1-201ENST00000300305 KRTAP12-4P60329 112 aa5.76□□□□□ -1.49
RUNX1-201ENST00000300305 LRP1Q07954 4544 aaKnown RBP5.74□□□□□ -1.49
RUNX1-201ENST00000300305 SPRR2DP22532 72 aa5.72□□□□□ -1.49
RUNX1-201ENST00000300305 MT1XP80297 61 aa5.7□□□□□ -1.5
RUNX1-201ENST00000300305 KRTAP19-8Q3LI54 63 aa5.66□□□□□ -1.5
RUNX1-201ENST00000300305 LCE2BO14633 110 aa5.61□□□□□ -1.51
RUNX1-201ENST00000300305 LPAP08519 4548 aa5.61□□□□□ -1.51
RUNX1-201ENST00000300305 MT1BP07438 61 aa5.6□□□□□ -1.51
RUNX1-201ENST00000300305 HSPG2P98160 4391 aa5.57□□□□□ -1.52
RUNX1-201ENST00000300305 KRTAP9-8Q9BYQ0 159 aa5.56□□□□□ -1.52
RUNX1-201ENST00000300305 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
RUNX1-201ENST00000300305 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
RUNX1-201ENST00000300305 KIAA1109Q2LD37 5005 aa5.47□□□□□ -1.53
RUNX1-201ENST00000300305 PKHD1P08F94 4074 aa5.46□□□□□ -1.54
RUNX1-201ENST00000300305 HYDINQ4G0P3 5121 aa5.46□□□□□ -1.54
RUNX1-201ENST00000300305 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
RUNX1-201ENST00000300305 LCE2CQ5TA81 110 aa5.42□□□□□ -1.54
RUNX1-201ENST00000300305 PKD1P98161 4303 aa5.41□□□□□ -1.54
RUNX1-201ENST00000300305 LRP2P98164 4655 aa5.4□□□□□ -1.54
RUNX1-201ENST00000300305 KRTAP19-4Q3LI73 84 aa5.4□□□□□ -1.55
RUNX1-201ENST00000300305 RYR2Q92736 4967 aa5.39□□□□□ -1.55
RUNX1-201ENST00000300305 PKHD1L1Q86WI1 4243 aa5.35□□□□□ -1.55
RUNX1-201ENST00000300305 LCE3EQ5T5B0 92 aa5.32□□□□□ -1.56
RUNX1-201ENST00000300305 LOC100996750A0A140TA64 210 aa5.29□□□□□ -1.56
RUNX1-201ENST00000300305 MT4P47944 62 aa5.29□□□□□ -1.56
RUNX1-201ENST00000300305 TNXBP22105 4242 aa5.27□□□□□ -1.57
RUNX1-201ENST00000300305 HERC2O95714 4834 aa5.25□□□□□ -1.57
RUNX1-201ENST00000300305 LCE2DQ5TA82 110 aaPredicted RBP5.24□□□□□ -1.57
RUNX1-201ENST00000300305 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
RUNX1-201ENST00000300305 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
RUNX1-201ENST00000300305 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
RUNX1-201ENST00000300305 PRM1P04553 51 aa5.18□□□□□ -1.58
RUNX1-201ENST00000300305 MT1LQ93083 61 aa5.16□□□□□ -1.58
RUNX1-201ENST00000300305 HERC1Q15751 4861 aa5.15□□□□□ -1.58
RUNX1-201ENST00000300305 LCE1BQ5T7P3 118 aa5.13□□□□□ -1.59
RUNX1-201ENST00000300305 KMT2CQ8NEZ4 4911 aaKnown RBP5.13□□□□□ -1.59
RUNX1-201ENST00000300305 MT1EP04732 61 aa5.11□□□□□ -1.59
RUNX1-201ENST00000300305 PCLOQ9Y6V0 5065 aa5.1□□□□□ -1.59
RUNX1-201ENST00000300305 KRTAP19-2Q3LHN2 52 aa5.09□□□□□ -1.6
RUNX1-201ENST00000300305 LCE1DQ5T752 114 aa5.06□□□□□ -1.6
RUNX1-201ENST00000300305 BIRC6Q9NR09 4857 aa5.06□□□□□ -1.6
RUNX1-201ENST00000300305 FLGP20930 4061 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms