RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 DNAH5Q8TE73 4624 aa5.55□□□□□ -1.52
CLPX-201ENST00000300107 ANK2Q01484 3957 aa5.55□□□□□ -1.52
CLPX-201ENST00000300107 KRTAP12-3P60328 96 aa5.53□□□□□ -1.52
CLPX-201ENST00000300107 PLECQ15149 4684 aaKnown RBP5.52□□□□□ -1.53
CLPX-201ENST00000300107 LORP23490 312 aaPredicted RBP5.51□□□□□ -1.53
CLPX-201ENST00000300107 LCE3AQ5TA76 89 aa5.46□□□□□ -1.53
CLPX-201ENST00000300107 DNAH9Q9NYC9 4486 aa5.46□□□□□ -1.54
CLPX-201ENST00000300107 DNAH11Q96DT5 4516 aa5.43□□□□□ -1.54
CLPX-201ENST00000300107 DNAH10Q8IVF4 4471 aa5.42□□□□□ -1.54
CLPX-201ENST00000300107 CRCT1Q9UGL9 99 aa5.38□□□□□ -1.55
CLPX-201ENST00000300107 LYSTQ99698 3801 aa5.37□□□□□ -1.55
CLPX-201ENST00000300107 RYR1P21817 5038 aa5.37□□□□□ -1.55
CLPX-201ENST00000300107 FAT1Q14517 4588 aa5.36□□□□□ -1.55
CLPX-201ENST00000300107 CMYA5Q8N3K9 4069 aa5.33□□□□□ -1.56
CLPX-201ENST00000300107 DNAH1Q9P2D7 4330 aa5.3□□□□□ -1.56
CLPX-201ENST00000300107 DYNC1H1Q14204 4646 aaKnown RBP5.27□□□□□ -1.57
CLPX-201ENST00000300107 KRTAP4-1Q9BYQ7 146 aa5.26□□□□□ -1.57
CLPX-201ENST00000300107 DNAH3Q8TD57 4116 aa5.26□□□□□ -1.57
CLPX-201ENST00000300107 ALMS1Q8TCU4 4167 aa5.25□□□□□ -1.57
CLPX-201ENST00000300107 DNAH8Q96JB1 4490 aa5.24□□□□□ -1.57
CLPX-201ENST00000300107 DNAH7Q8WXX0 4024 aa5.22□□□□□ -1.57
CLPX-201ENST00000300107 STARD9Q9P2P6 4700 aa5.21□□□□□ -1.58
CLPX-201ENST00000300107 KIAA1109Q2LD37 5005 aa5.2□□□□□ -1.58
CLPX-201ENST00000300107 PRKDCP78527 4128 aaKnown RBP5.2□□□□□ -1.58
CLPX-201ENST00000300107 LRP1BQ9NZR2 4599 aa5.19□□□□□ -1.58
CLPX-201ENST00000300107 KMT2AQ03164 3969 aa5.17□□□□□ -1.58
CLPX-201ENST00000300107 SACSQ9NZJ4 4579 aa5.15□□□□□ -1.58
CLPX-201ENST00000300107 VPS13DQ5THJ4 4388 aa5.14□□□□□ -1.59
CLPX-201ENST00000300107 MYCBP2O75592 4640 aa5.13□□□□□ -1.59
CLPX-201ENST00000300107 KRTAP10-5P60370 271 aa5.09□□□□□ -1.59
CLPX-201ENST00000300107 MT1HP80294 61 aa5.09□□□□□ -1.59
CLPX-201ENST00000300107 FRAS1Q86XX4 4008 aa5.09□□□□□ -1.59
CLPX-201ENST00000300107 DNAH17Q9UFH2 4485 aa5.09□□□□□ -1.59
CLPX-201ENST00000300107 KRTAP8-1Q8IUC2 63 aa5.06□□□□□ -1.6
CLPX-201ENST00000300107 SPRR2GQ9BYE4 73 aa5.06□□□□□ -1.6
CLPX-201ENST00000300107 DNAH2Q9P225 4427 aa5.05□□□□□ -1.6
CLPX-201ENST00000300107 MT2AP02795 61 aa5.05□□□□□ -1.6
CLPX-201ENST00000300107 RYR3Q15413 4870 aa5.04□□□□□ -1.6
CLPX-201ENST00000300107 HECTD4Q9Y4D8 3996 aa5.01□□□□□ -1.61
CLPX-201ENST00000300107 DNAH6Q9C0G6 4158 aa5□□□□□ -1.61
CLPX-201ENST00000300107 APOBP04114 4563 aaKnown RBP4.99□□□□□ -1.61
CLPX-201ENST00000300107 VPS13BQ7Z7G8 4022 aa4.99□□□□□ -1.61
CLPX-201ENST00000300107 DYNC2H1Q8NCM8 4307 aaKnown RBP4.98□□□□□ -1.61
CLPX-201ENST00000300107 FAT3Q8TDW7 4589 aa4.96□□□□□ -1.61
CLPX-201ENST00000300107 MT1FP04733 61 aa4.96□□□□□ -1.62
CLPX-201ENST00000300107 FAT2Q9NYQ8 4349 aa4.95□□□□□ -1.62
CLPX-201ENST00000300107 KRTAP17-1Q9BYP8 105 aa4.92□□□□□ -1.62
CLPX-201ENST00000300107 HYDINQ4G0P3 5121 aa4.9□□□□□ -1.63
CLPX-201ENST00000300107 LRP1Q07954 4544 aaKnown RBP4.89□□□□□ -1.63
CLPX-201ENST00000300107 KRTAP19-5Q3LI72 72 aa4.85□□□□□ -1.63
CLPX-201ENST00000300107 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
CLPX-201ENST00000300107 HERC2O95714 4834 aa4.83□□□□□ -1.64
CLPX-201ENST00000300107 PKHD1P08F94 4074 aa4.82□□□□□ -1.64
CLPX-201ENST00000300107 SPRR2FQ96RM1 72 aa4.78□□□□□ -1.64
CLPX-201ENST00000300107 LCE2DQ5TA82 110 aaPredicted RBP4.76□□□□□ -1.65
CLPX-201ENST00000300107 LRP2P98164 4655 aa4.75□□□□□ -1.65
CLPX-201ENST00000300107 KRTAP19-4Q3LI73 84 aa4.75□□□□□ -1.65
CLPX-201ENST00000300107 KRTAP19-1Q8IUB9 90 aa4.74□□□□□ -1.65
CLPX-201ENST00000300107 RYR2Q92736 4967 aa4.72□□□□□ -1.65
CLPX-201ENST00000300107 PCLOQ9Y6V0 5065 aa4.72□□□□□ -1.65
CLPX-201ENST00000300107 PKD1P98161 4303 aa4.71□□□□□ -1.65
CLPX-201ENST00000300107 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
CLPX-201ENST00000300107 KRTAP19-8Q3LI54 63 aa4.69□□□□□ -1.66
CLPX-201ENST00000300107 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
CLPX-201ENST00000300107 KMT2CQ8NEZ4 4911 aaKnown RBP4.61□□□□□ -1.67
CLPX-201ENST00000300107 BIRC6Q9NR09 4857 aa4.6□□□□□ -1.67
CLPX-201ENST00000300107 EPPK1P58107 5090 aaKnown RBP4.59□□□□□ -1.68
CLPX-201ENST00000300107 MT1XP80297 61 aa4.58□□□□□ -1.68
CLPX-201ENST00000300107 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
CLPX-201ENST00000300107 KRTAP9-8Q9BYQ0 159 aa4.52□□□□□ -1.69
CLPX-201ENST00000300107 MT1BP07438 61 aa4.52□□□□□ -1.69
CLPX-201ENST00000300107 HERC1Q15751 4861 aa4.5□□□□□ -1.69
CLPX-201ENST00000300107 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
CLPX-201ENST00000300107 FSIP2Q5CZC0 6907 aa4.48□□□□□ -1.69
CLPX-201ENST00000300107 LCE2CQ5TA81 110 aa4.48□□□□□ -1.69
CLPX-201ENST00000300107 HSPG2P98160 4391 aa4.46□□□□□ -1.7
CLPX-201ENST00000300107 KRTAP4-8A0A0G2JLE6 195 aa4.45□□□□□ -1.7
CLPX-201ENST00000300107 KRTAP4-8Q9BYQ9 185 aa4.45□□□□□ -1.7
CLPX-201ENST00000300107 PKHD1L1Q86WI1 4243 aa4.43□□□□□ -1.7
CLPX-201ENST00000300107 SPRR2EP22531 72 aa4.42□□□□□ -1.7
CLPX-201ENST00000300107 SPRR2BP35325 72 aa4.42□□□□□ -1.7
CLPX-201ENST00000300107 SPRR2AP35326 72 aa4.42□□□□□ -1.7
CLPX-201ENST00000300107 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
CLPX-201ENST00000300107 LCE3BQ5TA77 95 aa4.4□□□□□ -1.7
CLPX-201ENST00000300107 ABCA13Q86UQ4 5058 aa4.4□□□□□ -1.7
CLPX-201ENST00000300107 KRTAP9-3Q9BYQ3 159 aa4.4□□□□□ -1.71
CLPX-201ENST00000300107 LPAP08519 4548 aa4.39□□□□□ -1.71
CLPX-201ENST00000300107 MT1GP13640 62 aa4.37□□□□□ -1.71
CLPX-201ENST00000300107 TNXBP22105 4242 aa4.35□□□□□ -1.71
CLPX-201ENST00000300107 KRTAP19-2Q3LHN2 52 aa4.27□□□□□ -1.73
CLPX-201ENST00000300107 LCE2BO14633 110 aa4.27□□□□□ -1.73
CLPX-201ENST00000300107 SPRR2DP22532 72 aa4.26□□□□□ -1.73
CLPX-201ENST00000300107 LCE3DQ9BYE3 92 aa4.25□□□□□ -1.73
CLPX-201ENST00000300107 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
CLPX-201ENST00000300107 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
CLPX-201ENST00000300107 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
CLPX-201ENST00000300107 MT1LQ93083 61 aa4.17□□□□□ -1.74
CLPX-201ENST00000300107 FAT4Q6V0I7 4981 aa4.14□□□□□ -1.75
CLPX-201ENST00000300107 MUC2Q02817 5179 aa4.13□□□□□ -1.75
CLPX-201ENST00000300107 RNF213Q63HN8 5207 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms