RNA–Protein interactions for RNA: ENST00000298694.8

ARHGEF40-201, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARHGEF40, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-201ENST00000298694 MUC3AQ02505 3323 aa6.81□□□□□ -1.32
ARHGEF40-201ENST00000298694 BSNQ9UPA5 3926 aa6.73□□□□□ -1.33
ARHGEF40-201ENST00000298694 VPS13CQ709C8 3753 aa6.69□□□□□ -1.34
ARHGEF40-201ENST00000298694 KRTAP4-1Q9BYQ7 146 aa6.63□□□□□ -1.35
ARHGEF40-201ENST00000298694 MT1HP80294 61 aa6.62□□□□□ -1.35
ARHGEF40-201ENST00000298694 DNAH5Q8TE73 4624 aa6.58□□□□□ -1.36
ARHGEF40-201ENST00000298694 DNAH9Q9NYC9 4486 aa6.57□□□□□ -1.36
ARHGEF40-201ENST00000298694 CSMD3Q7Z407 3707 aa6.55□□□□□ -1.36
ARHGEF40-201ENST00000298694 MT2AP02795 61 aa6.51□□□□□ -1.37
ARHGEF40-201ENST00000298694 DNAH10Q8IVF4 4471 aa6.49□□□□□ -1.37
ARHGEF40-201ENST00000298694 AKAP9Q99996 3911 aa6.48□□□□□ -1.37
ARHGEF40-201ENST00000298694 DNAH1Q9P2D7 4330 aa6.47□□□□□ -1.37
ARHGEF40-201ENST00000298694 DNAH2Q9P225 4427 aa6.47□□□□□ -1.37
ARHGEF40-201ENST00000298694 SPRR2GQ9BYE4 73 aa6.43□□□□□ -1.38
ARHGEF40-201ENST00000298694 SPRR2FQ96RM1 72 aa6.4□□□□□ -1.38
ARHGEF40-201ENST00000298694 PLECQ15149 4684 aaKnown RBP6.4□□□□□ -1.39
ARHGEF40-201ENST00000298694 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
ARHGEF40-201ENST00000298694 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
ARHGEF40-201ENST00000298694 MT1FP04733 61 aa6.37□□□□□ -1.39
ARHGEF40-201ENST00000298694 DNAH11Q96DT5 4516 aa6.36□□□□□ -1.39
ARHGEF40-201ENST00000298694 LCE3CQ5T5A8 94 aa6.27□□□□□ -1.41
ARHGEF40-201ENST00000298694 DNAH17Q9UFH2 4485 aa6.26□□□□□ -1.41
ARHGEF40-201ENST00000298694 ZNF469Q96JG9 3925 aaPredicted RBP6.2□□□□□ -1.42
ARHGEF40-201ENST00000298694 FAT1Q14517 4588 aa6.2□□□□□ -1.42
ARHGEF40-201ENST00000298694 VPS13DQ5THJ4 4388 aa6.19□□□□□ -1.42
ARHGEF40-201ENST00000298694 DYNC1H1Q14204 4646 aaKnown RBP6.17□□□□□ -1.42
ARHGEF40-201ENST00000298694 LRP1BQ9NZR2 4599 aa6.14□□□□□ -1.43
ARHGEF40-201ENST00000298694 FAT2Q9NYQ8 4349 aa6.13□□□□□ -1.43
ARHGEF40-201ENST00000298694 DNAH8Q96JB1 4490 aa6.11□□□□□ -1.43
ARHGEF40-201ENST00000298694 SACSQ9NZJ4 4579 aa6.11□□□□□ -1.43
ARHGEF40-201ENST00000298694 DNAH3Q8TD57 4116 aa6.11□□□□□ -1.43
ARHGEF40-201ENST00000298694 DYNC2H1Q8NCM8 4307 aaKnown RBP6.04□□□□□ -1.44
ARHGEF40-201ENST00000298694 SPRR2EP22531 72 aa6.03□□□□□ -1.44
ARHGEF40-201ENST00000298694 SPRR2BP35325 72 aa6.03□□□□□ -1.44
ARHGEF40-201ENST00000298694 SPRR2AP35326 72 aa6.03□□□□□ -1.44
ARHGEF40-201ENST00000298694 RYR1P21817 5038 aa6.01□□□□□ -1.45
ARHGEF40-201ENST00000298694 DNHD1Q96M86 4753 aa6□□□□□ -1.45
ARHGEF40-201ENST00000298694 STARD9Q9P2P6 4700 aa5.99□□□□□ -1.45
ARHGEF40-201ENST00000298694 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
ARHGEF40-201ENST00000298694 ANK2Q01484 3957 aa5.96□□□□□ -1.46
ARHGEF40-201ENST00000298694 APOBP04114 4563 aaKnown RBP5.93□□□□□ -1.46
ARHGEF40-201ENST00000298694 LCE3BQ5TA77 95 aa5.93□□□□□ -1.46
ARHGEF40-201ENST00000298694 KRTAP19-8Q3LI54 63 aa5.91□□□□□ -1.46
ARHGEF40-201ENST00000298694 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
ARHGEF40-201ENST00000298694 VPS13BQ7Z7G8 4022 aa5.84□□□□□ -1.47
ARHGEF40-201ENST00000298694 MT1GP13640 62 aa5.84□□□□□ -1.47
ARHGEF40-201ENST00000298694 SPRR2DP22532 72 aa5.84□□□□□ -1.47
ARHGEF40-201ENST00000298694 MT1XP80297 61 aa5.83□□□□□ -1.48
ARHGEF40-201ENST00000298694 PRKDCP78527 4128 aaKnown RBP5.8□□□□□ -1.48
ARHGEF40-201ENST00000298694 KMT2AQ03164 3969 aa5.79□□□□□ -1.48
ARHGEF40-201ENST00000298694 RYR3Q15413 4870 aa5.78□□□□□ -1.48
ARHGEF40-201ENST00000298694 FRAS1Q86XX4 4008 aa5.78□□□□□ -1.48
ARHGEF40-201ENST00000298694 LCE2BO14633 110 aa5.77□□□□□ -1.49
ARHGEF40-201ENST00000298694 DNAH7Q8WXX0 4024 aa5.76□□□□□ -1.49
ARHGEF40-201ENST00000298694 FAT3Q8TDW7 4589 aa5.75□□□□□ -1.49
ARHGEF40-201ENST00000298694 KRTAP17-1Q9BYP8 105 aa5.74□□□□□ -1.49
ARHGEF40-201ENST00000298694 MT1BP07438 61 aa5.73□□□□□ -1.49
ARHGEF40-201ENST00000298694 KRTAP12-4P60329 112 aa5.72□□□□□ -1.49
ARHGEF40-201ENST00000298694 LRP1Q07954 4544 aaKnown RBP5.71□□□□□ -1.5
ARHGEF40-201ENST00000298694 CMYA5Q8N3K9 4069 aa5.71□□□□□ -1.5
ARHGEF40-201ENST00000298694 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
ARHGEF40-201ENST00000298694 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
ARHGEF40-201ENST00000298694 DNAH6Q9C0G6 4158 aa5.68□□□□□ -1.5
ARHGEF40-201ENST00000298694 KRTAP9-8Q9BYQ0 159 aa5.66□□□□□ -1.5
ARHGEF40-201ENST00000298694 HERC1Q15751 4861 aa5.61□□□□□ -1.51
ARHGEF40-201ENST00000298694 LYSTQ99698 3801 aa5.59□□□□□ -1.51
ARHGEF40-201ENST00000298694 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
ARHGEF40-201ENST00000298694 LCE3DQ9BYE3 92 aa5.55□□□□□ -1.52
ARHGEF40-201ENST00000298694 MYCBP2O75592 4640 aa5.52□□□□□ -1.53
ARHGEF40-201ENST00000298694 RYR2Q92736 4967 aa5.49□□□□□ -1.53
ARHGEF40-201ENST00000298694 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
ARHGEF40-201ENST00000298694 LCE3EQ5T5B0 92 aa5.44□□□□□ -1.54
ARHGEF40-201ENST00000298694 HSPG2P98160 4391 aa5.44□□□□□ -1.54
ARHGEF40-201ENST00000298694 SPRR5A0A1B0GTR4 108 aa5.44□□□□□ -1.54
ARHGEF40-201ENST00000298694 HECTD4Q9Y4D8 3996 aa5.43□□□□□ -1.54
ARHGEF40-201ENST00000298694 KRTAP19-3Q7Z4W3 81 aa5.41□□□□□ -1.54
ARHGEF40-201ENST00000298694 PKD1P98161 4303 aa5.37□□□□□ -1.55
ARHGEF40-201ENST00000298694 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
ARHGEF40-201ENST00000298694 KIAA1109Q2LD37 5005 aa5.37□□□□□ -1.55
ARHGEF40-201ENST00000298694 PKHD1L1Q86WI1 4243 aa5.34□□□□□ -1.55
ARHGEF40-201ENST00000298694 LCE2DQ5TA82 110 aaPredicted RBP5.33□□□□□ -1.56
ARHGEF40-201ENST00000298694 MT1LQ93083 61 aa5.33□□□□□ -1.56
ARHGEF40-201ENST00000298694 MT1EP04732 61 aa5.27□□□□□ -1.57
ARHGEF40-201ENST00000298694 LPAP08519 4548 aa5.21□□□□□ -1.57
ARHGEF40-201ENST00000298694 HERC2O95714 4834 aa5.19□□□□□ -1.58
ARHGEF40-201ENST00000298694 MT4P47944 62 aa5.19□□□□□ -1.58
ARHGEF40-201ENST00000298694 BIRC6Q9NR09 4857 aa5.19□□□□□ -1.58
ARHGEF40-201ENST00000298694 PCLOQ9Y6V0 5065 aa5.16□□□□□ -1.58
ARHGEF40-201ENST00000298694 MT1MQ8N339 61 aa5.14□□□□□ -1.59
ARHGEF40-201ENST00000298694 LRP2P98164 4655 aa5.14□□□□□ -1.59
ARHGEF40-201ENST00000298694 MT3P25713 68 aa5.13□□□□□ -1.59
ARHGEF40-201ENST00000298694 KRTAP19-2Q3LHN2 52 aa5.11□□□□□ -1.59
ARHGEF40-201ENST00000298694 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
ARHGEF40-201ENST00000298694 HYDINQ4G0P3 5121 aa5.07□□□□□ -1.6
ARHGEF40-201ENST00000298694 PRM1P04553 51 aa5.06□□□□□ -1.6
ARHGEF40-201ENST00000298694 PKHD1P08F94 4074 aa5.04□□□□□ -1.6
ARHGEF40-201ENST00000298694 KRTAP4-3Q9BYR4 195 aa5.03□□□□□ -1.6
ARHGEF40-201ENST00000298694 KRTAP19-6Q3LI70 58 aa5.02□□□□□ -1.61
ARHGEF40-201ENST00000298694 LCE1BQ5T7P3 118 aa5.02□□□□□ -1.61
ARHGEF40-201ENST00000298694 KRTAP9-2Q9BYQ4 174 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms