RNA–Protein interactions for RNA: ENST00000298694.8

ARHGEF40-201, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARHGEF40, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-201ENST00000298694 DCAF8L2P0C7V8 631 aa28.69■■■□□ 2.18
ARHGEF40-201ENST00000298694 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
ARHGEF40-201ENST00000298694 EHMT2Q96KQ7 1210 aa26.58■■□□□ 1.85
ARHGEF40-201ENST00000298694 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
ARHGEF40-201ENST00000298694 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
ARHGEF40-201ENST00000298694 PELP1Q8IZL8 1130 aaKnown RBP26.19■■□□□ 1.78
ARHGEF40-201ENST00000298694 APLP2Q06481 763 aa26.05■■□□□ 1.76
ARHGEF40-201ENST00000298694 FAM9AQ8IZU1 332 aaPredicted RBP25.7■■□□□ 1.71
ARHGEF40-201ENST00000298694 TTBK1Q5TCY1 1321 aaPredicted RBP25.7■■□□□ 1.7
ARHGEF40-201ENST00000298694 RANGAP1P46060 587 aaPredicted RBP25.4■■□□□ 1.66
ARHGEF40-201ENST00000298694 PCGF6Q9BYE7 350 aa25.38■■□□□ 1.65
ARHGEF40-201ENST00000298694 ERICH6Q7L0X2 663 aa25.22■■□□□ 1.63
ARHGEF40-201ENST00000298694 ATP1B4Q9UN42 357 aaPredicted RBP25.22■■□□□ 1.63
ARHGEF40-201ENST00000298694 CENPBP07199 599 aaPredicted RBP25.11■■□□□ 1.61
ARHGEF40-201ENST00000298694 CCER1Q8TC90 406 aaPredicted RBP25.08■■□□□ 1.61
ARHGEF40-201ENST00000298694 TRIM41Q8WV44 630 aa25.06■■□□□ 1.6
ARHGEF40-201ENST00000298694 ZEB1P37275 1124 aaPredicted RBP24.97■■□□□ 1.59
ARHGEF40-201ENST00000298694 UBTFP17480 764 aaKnown RBP24.91■■□□□ 1.58
ARHGEF40-201ENST00000298694 NEFLP07196 543 aa24.73■■□□□ 1.55
ARHGEF40-201ENST00000298694 YTHDC1Q96MU7 727 aaKnown RBP24.71■■□□□ 1.55
ARHGEF40-201ENST00000298694 PPARGC1BQ86YN6 1023 aaKnown RBP24.54■■□□□ 1.52
ARHGEF40-201ENST00000298694 MYT1LQ9UL68 1186 aa24.34■■□□□ 1.49
ARHGEF40-201ENST00000298694 POLR3GLQ9BT43 218 aa24.27■■□□□ 1.48
ARHGEF40-201ENST00000298694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.27■■□□□ 1.48
ARHGEF40-201ENST00000298694 HNRNPUL2Q1KMD3 747 aaKnown RBP24.27■■□□□ 1.48
ARHGEF40-201ENST00000298694 ITGAEP38570 1179 aa24.26■■□□□ 1.47
ARHGEF40-201ENST00000298694 TRIM26Q12899 539 aaPredicted RBP24.17■■□□□ 1.46
ARHGEF40-201ENST00000298694 DAXXQ9UER7 740 aaPredicted RBP24.14■■□□□ 1.46
ARHGEF40-201ENST00000298694 CNGB1Q14028 1251 aaPredicted RBP24.04■■□□□ 1.44
ARHGEF40-201ENST00000298694 MYT1Q01538 1121 aa24.04■■□□□ 1.44
ARHGEF40-201ENST00000298694 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
ARHGEF40-201ENST00000298694 HRCP23327 699 aa23.92■■□□□ 1.42
ARHGEF40-201ENST00000298694 SLC4A1APQ9BWU0 796 aaKnown RBP23.88■■□□□ 1.41
ARHGEF40-201ENST00000298694 LOC105371045A0A1W2PR82 267 aa23.86■■□□□ 1.41
ARHGEF40-201ENST00000298694 CLSPNQ9HAW4 1339 aa23.61■■□□□ 1.37
ARHGEF40-201ENST00000298694 ZNF316A6NFI3 1004 aaPredicted RBP23.58■■□□□ 1.37
ARHGEF40-201ENST00000298694 FAM50AQ14320 339 aaKnown RBP23.58■■□□□ 1.37
ARHGEF40-201ENST00000298694 TRIM52Q96A61 297 aa23.51■■□□□ 1.35
ARHGEF40-201ENST00000298694 RTL5Q5HYW3 569 aaPredicted RBP23.48■■□□□ 1.35
ARHGEF40-201ENST00000298694 DIEXFQ68CQ4 756 aaKnown RBP23.46■■□□□ 1.35
ARHGEF40-201ENST00000298694 NEUROD1Q13562 356 aa23.4■■□□□ 1.34
ARHGEF40-201ENST00000298694 ZNF326Q5BKZ1 582 aaKnown RBP23.3■■□□□ 1.32
ARHGEF40-201ENST00000298694 PABPN1Q86U42 306 aaKnown RBP eCLIP23.27■■□□□ 1.32
ARHGEF40-201ENST00000298694 BCANQ96GW7 911 aa23.23■■□□□ 1.31
ARHGEF40-201ENST00000298694 ZBTB47Q9UFB7 747 aaPredicted RBP23.17■■□□□ 1.3
ARHGEF40-201ENST00000298694 ANP32CO43423 234 aa23.16■■□□□ 1.3
ARHGEF40-201ENST00000298694 FBLN2P98095 1184 aa23.16■■□□□ 1.3
ARHGEF40-201ENST00000298694 SLC24A1O60721 1099 aa23.11■■□□□ 1.29
ARHGEF40-201ENST00000298694 ABCC9O60706 1549 aa23.1■■□□□ 1.29
ARHGEF40-201ENST00000298694 BCL11AQ9H165 835 aa23.07■■□□□ 1.28
ARHGEF40-201ENST00000298694 CANXP27824 592 aaKnown RBP23.04■■□□□ 1.28
ARHGEF40-201ENST00000298694 CDK11AQ9UQ88 783 aaPredicted RBP23.03■■□□□ 1.28
ARHGEF40-201ENST00000298694 GTF3C3Q9Y5Q9 886 aa22.98■■□□□ 1.27
ARHGEF40-201ENST00000298694 ARID3CA6NKF2 412 aa22.96■■□□□ 1.27
ARHGEF40-201ENST00000298694 NEFMP07197 916 aa22.93■■□□□ 1.26
ARHGEF40-201ENST00000298694 P3H3Q8IVL6 736 aa22.91■■□□□ 1.26
ARHGEF40-201ENST00000298694 ZNF777Q9ULD5 760 aaPredicted RBP22.83■■□□□ 1.24
ARHGEF40-201ENST00000298694 ANP32AP39687 249 aaKnown RBP22.67■■□□□ 1.22
ARHGEF40-201ENST00000298694 NPM2Q86SE8 214 aaKnown RBP22.66■■□□□ 1.22
ARHGEF40-201ENST00000298694 CSRNP3Q8WYN3 585 aa22.63■■□□□ 1.21
ARHGEF40-201ENST00000298694 ESF1Q9H501 851 aaKnown RBP22.63■■□□□ 1.21
ARHGEF40-201ENST00000298694 CHGAP10645 457 aaKnown RBP22.59■■□□□ 1.21
ARHGEF40-201ENST00000298694 STAG3Q9UJ98 1225 aa22.56■■□□□ 1.2
ARHGEF40-201ENST00000298694 PLPPR3Q6T4P5 718 aa22.55■■□□□ 1.2
ARHGEF40-201ENST00000298694 ACIN1Q9UKV3 1341 aaKnown RBP22.52■■□□□ 1.2
ARHGEF40-201ENST00000298694 TONSLQ96HA7 1378 aa22.49■■□□□ 1.19
ARHGEF40-201ENST00000298694 HSP90AA1P07900 732 aaKnown RBP22.46■■□□□ 1.19
ARHGEF40-201ENST00000298694 FKBP8Q14318 412 aa22.44■■□□□ 1.18
ARHGEF40-201ENST00000298694 ANP32BQ92688 251 aaKnown RBP22.41■■□□□ 1.18
ARHGEF40-201ENST00000298694 FAM9BQ8IZU0 186 aa22.41■■□□□ 1.18
ARHGEF40-201ENST00000298694 HNRNPUQ00839 825 aaKnown RBP eCLIP22.4■■□□□ 1.18
ARHGEF40-201ENST00000298694 SALL2Q9Y467 1007 aaPredicted RBP22.39■■□□□ 1.17
ARHGEF40-201ENST00000298694 UPF2Q9HAU5 1272 aaKnown RBP22.37■■□□□ 1.17
ARHGEF40-201ENST00000298694 NPM1P06748 294 aaKnown RBP eCLIP22.36■■□□□ 1.17
ARHGEF40-201ENST00000298694 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.34■■□□□ 1.171e-6■■□□□ 13.1
ARHGEF40-201ENST00000298694 DDX10Q13206 875 aaKnown RBP22.33■■□□□ 1.17
ARHGEF40-201ENST00000298694 CHIC2Q9UKJ5 165 aa22.31■■□□□ 1.16
ARHGEF40-201ENST00000298694 TMC1Q8TDI8 760 aa22.24■■□□□ 1.15
ARHGEF40-201ENST00000298694 EIF5BO60841 1220 aaKnown RBP22.23■■□□□ 1.15
ARHGEF40-201ENST00000298694 WDR43Q15061 677 aaKnown RBP eCLIP22.22■■□□□ 1.15
ARHGEF40-201ENST00000298694 SCRIBQ14160 1630 aa22.21■■□□□ 1.15
ARHGEF40-201ENST00000298694 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.19■■□□□ 1.14
ARHGEF40-201ENST00000298694 KDM2AQ9Y2K7 1162 aa22.19■■□□□ 1.14
ARHGEF40-201ENST00000298694 CCDC136Q96JN2 1154 aa22.18■■□□□ 1.14
ARHGEF40-201ENST00000298694 SCAF1Q9H7N4 1312 aaKnown RBP22.18■■□□□ 1.14
ARHGEF40-201ENST00000298694 TSPY4P0CV99 314 aa22.12■■□□□ 1.13
ARHGEF40-201ENST00000298694 TSPY10P0CW01 314 aa22.12■■□□□ 1.13
ARHGEF40-201ENST00000298694 MRS2Q9HD23 443 aa22.1■■□□□ 1.13
ARHGEF40-201ENST00000298694 ARXQ96QS3 562 aa22.1■■□□□ 1.13
ARHGEF40-201ENST00000298694 NBR1Q14596 966 aa22.08■■□□□ 1.12
ARHGEF40-201ENST00000298694 A0A0G2JS52 829 aa22.07■■□□□ 1.12
ARHGEF40-201ENST00000298694 ZBTB7CA1YPR0 619 aa22.04■■□□□ 1.12
ARHGEF40-201ENST00000298694 SENP3Q9H4L4 574 aaPredicted RBP22.04■■□□□ 1.12
ARHGEF40-201ENST00000298694 MTUS2Q5JR59 1369 aa22.04■■□□□ 1.12
ARHGEF40-201ENST00000298694 MYH16Q9H6N6 1097 aa22.02■■□□□ 1.12
ARHGEF40-201ENST00000298694 PLEKHG5O94827 1062 aa22.01■■□□□ 1.11
ARHGEF40-201ENST00000298694 IRX6P78412 446 aaPredicted RBP22■■□□□ 1.11
ARHGEF40-201ENST00000298694 HIRIP3Q9BW71 556 aaPredicted RBP21.99■■□□□ 1.11
ARHGEF40-201ENST00000298694 CHMP7Q8WUX9 453 aaPredicted RBP21.99■■□□□ 1.11
ARHGEF40-201ENST00000298694 DCAF1Q9Y4B6 1507 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms