RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 DNAH10Q8IVF4 4471 aa7.05□□□□□ -1.28
SNAPC4-201ENST00000298532 AKAP9Q99996 3911 aa7.04□□□□□ -1.28
SNAPC4-201ENST00000298532 LCE3AQ5TA76 89 aa7.03□□□□□ -1.28
SNAPC4-201ENST00000298532 DNHD1Q96M86 4753 aa7.03□□□□□ -1.28
SNAPC4-201ENST00000298532 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
SNAPC4-201ENST00000298532 DNAH5Q8TE73 4624 aa7□□□□□ -1.29
SNAPC4-201ENST00000298532 PLECQ15149 4684 aaKnown RBP6.92□□□□□ -1.3
SNAPC4-201ENST00000298532 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
SNAPC4-201ENST00000298532 CRCT1Q9UGL9 99 aa6.83□□□□□ -1.32
SNAPC4-201ENST00000298532 VPS13CQ709C8 3753 aa6.81□□□□□ -1.32
SNAPC4-201ENST00000298532 DYNC1H1Q14204 4646 aaKnown RBP6.8□□□□□ -1.32
SNAPC4-201ENST00000298532 MT1HP80294 61 aa6.75□□□□□ -1.33
SNAPC4-201ENST00000298532 ZNF469Q96JG9 3925 aaPredicted RBP6.74□□□□□ -1.33
SNAPC4-201ENST00000298532 DNAH17Q9UFH2 4485 aa6.73□□□□□ -1.33
SNAPC4-201ENST00000298532 DNAH2Q9P225 4427 aa6.73□□□□□ -1.33
SNAPC4-201ENST00000298532 CSMD3Q7Z407 3707 aa6.7□□□□□ -1.34
SNAPC4-201ENST00000298532 KRTAP4-1Q9BYQ7 146 aa6.69□□□□□ -1.34
SNAPC4-201ENST00000298532 ANK2Q01484 3957 aa6.65□□□□□ -1.34
SNAPC4-201ENST00000298532 LRP1BQ9NZR2 4599 aa6.63□□□□□ -1.35
SNAPC4-201ENST00000298532 FAT2Q9NYQ8 4349 aa6.6□□□□□ -1.35
SNAPC4-201ENST00000298532 DYNC2H1Q8NCM8 4307 aaKnown RBP6.6□□□□□ -1.35
SNAPC4-201ENST00000298532 MT2AP02795 61 aa6.58□□□□□ -1.36
SNAPC4-201ENST00000298532 RYR1P21817 5038 aa6.57□□□□□ -1.36
SNAPC4-201ENST00000298532 STARD9Q9P2P6 4700 aa6.56□□□□□ -1.36
SNAPC4-201ENST00000298532 KRTAP8-1Q8IUC2 63 aa6.56□□□□□ -1.36
SNAPC4-201ENST00000298532 KRTAP10-5P60370 271 aa6.55□□□□□ -1.36
SNAPC4-201ENST00000298532 PRKDCP78527 4128 aaKnown RBP6.5□□□□□ -1.37
SNAPC4-201ENST00000298532 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
SNAPC4-201ENST00000298532 DNAH6Q9C0G6 4158 aa6.48□□□□□ -1.37
SNAPC4-201ENST00000298532 FAT1Q14517 4588 aa6.48□□□□□ -1.37
SNAPC4-201ENST00000298532 SACSQ9NZJ4 4579 aa6.47□□□□□ -1.37
SNAPC4-201ENST00000298532 DNAH3Q8TD57 4116 aa6.44□□□□□ -1.38
SNAPC4-201ENST00000298532 BIRC6Q9NR09 4857 aa6.43□□□□□ -1.38
SNAPC4-201ENST00000298532 RYR3Q15413 4870 aa6.41□□□□□ -1.38
SNAPC4-201ENST00000298532 RYR2Q92736 4967 aa6.39□□□□□ -1.39
SNAPC4-201ENST00000298532 DNAH8Q96JB1 4490 aa6.39□□□□□ -1.39
SNAPC4-201ENST00000298532 MT1FP04733 61 aa6.39□□□□□ -1.39
SNAPC4-201ENST00000298532 KIAA1109Q2LD37 5005 aa6.34□□□□□ -1.39
SNAPC4-201ENST00000298532 KRTAP17-1Q9BYP8 105 aa6.34□□□□□ -1.39
SNAPC4-201ENST00000298532 LCE3CQ5T5A8 94 aa6.25□□□□□ -1.41
SNAPC4-201ENST00000298532 HERC1Q15751 4861 aa6.23□□□□□ -1.41
SNAPC4-201ENST00000298532 KRTAP19-5Q3LI72 72 aa6.22□□□□□ -1.41
SNAPC4-201ENST00000298532 APOBP04114 4563 aaKnown RBP6.18□□□□□ -1.42
SNAPC4-201ENST00000298532 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
SNAPC4-201ENST00000298532 FAT3Q8TDW7 4589 aa6.17□□□□□ -1.42
SNAPC4-201ENST00000298532 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.42
SNAPC4-201ENST00000298532 HERC2O95714 4834 aa6.13□□□□□ -1.43
SNAPC4-201ENST00000298532 SPRR2FQ96RM1 72 aa6.13□□□□□ -1.43
SNAPC4-201ENST00000298532 KMT2AQ03164 3969 aa6.1□□□□□ -1.43
SNAPC4-201ENST00000298532 DNAH7Q8WXX0 4024 aa6.09□□□□□ -1.43
SNAPC4-201ENST00000298532 HSPG2P98160 4391 aa6.09□□□□□ -1.43
SNAPC4-201ENST00000298532 CMYA5Q8N3K9 4069 aa6.07□□□□□ -1.44
SNAPC4-201ENST00000298532 SPRR5A0A1B0GTR4 108 aa6.06□□□□□ -1.44
SNAPC4-201ENST00000298532 VPS13BQ7Z7G8 4022 aa6.02□□□□□ -1.45
SNAPC4-201ENST00000298532 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
SNAPC4-201ENST00000298532 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
SNAPC4-201ENST00000298532 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
SNAPC4-201ENST00000298532 LCE2CQ5TA81 110 aa5.96□□□□□ -1.45
SNAPC4-201ENST00000298532 LRP1Q07954 4544 aaKnown RBP5.95□□□□□ -1.46
SNAPC4-201ENST00000298532 PCLOQ9Y6V0 5065 aa5.94□□□□□ -1.46
SNAPC4-201ENST00000298532 PKHD1L1Q86WI1 4243 aa5.94□□□□□ -1.46
SNAPC4-201ENST00000298532 MYCBP2O75592 4640 aa5.93□□□□□ -1.46
SNAPC4-201ENST00000298532 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
SNAPC4-201ENST00000298532 LYSTQ99698 3801 aa5.87□□□□□ -1.47
SNAPC4-201ENST00000298532 SPRR2EP22531 72 aa5.86□□□□□ -1.47
SNAPC4-201ENST00000298532 SPRR2BP35325 72 aa5.86□□□□□ -1.47
SNAPC4-201ENST00000298532 SPRR2AP35326 72 aa5.86□□□□□ -1.47
SNAPC4-201ENST00000298532 MT1XP80297 61 aa5.85□□□□□ -1.47
SNAPC4-201ENST00000298532 PKD1P98161 4303 aa5.84□□□□□ -1.48
SNAPC4-201ENST00000298532 MT1BP07438 61 aa5.84□□□□□ -1.48
SNAPC4-201ENST00000298532 FRAS1Q86XX4 4008 aa5.78□□□□□ -1.48
SNAPC4-201ENST00000298532 KRTAP12-4P60329 112 aa5.77□□□□□ -1.49
SNAPC4-201ENST00000298532 HYDINQ4G0P3 5121 aa5.76□□□□□ -1.49
SNAPC4-201ENST00000298532 HECTD4Q9Y4D8 3996 aa5.76□□□□□ -1.49
SNAPC4-201ENST00000298532 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
SNAPC4-201ENST00000298532 SPRR2DP22532 72 aa5.7□□□□□ -1.5
SNAPC4-201ENST00000298532 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
SNAPC4-201ENST00000298532 LCE2BO14633 110 aa5.66□□□□□ -1.5
SNAPC4-201ENST00000298532 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
SNAPC4-201ENST00000298532 KRTAP9-2Q9BYQ4 174 aa5.64□□□□□ -1.51
SNAPC4-201ENST00000298532 MT1GP13640 62 aa5.61□□□□□ -1.51
SNAPC4-201ENST00000298532 ABCA13Q86UQ4 5058 aa5.59□□□□□ -1.51
SNAPC4-201ENST00000298532 KMT2CQ8NEZ4 4911 aaKnown RBP5.57□□□□□ -1.52
SNAPC4-201ENST00000298532 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
SNAPC4-201ENST00000298532 LRP2P98164 4655 aa5.55□□□□□ -1.52
SNAPC4-201ENST00000298532 KRTAP19-6Q3LI70 58 aa5.55□□□□□ -1.52
SNAPC4-201ENST00000298532 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
SNAPC4-201ENST00000298532 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
SNAPC4-201ENST00000298532 PKHD1P08F94 4074 aa5.52□□□□□ -1.53
SNAPC4-201ENST00000298532 EPPK1P58107 5090 aaKnown RBP5.48□□□□□ -1.53
SNAPC4-201ENST00000298532 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
SNAPC4-201ENST00000298532 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.54
SNAPC4-201ENST00000298532 LCE3EQ5T5B0 92 aa5.42□□□□□ -1.54
SNAPC4-201ENST00000298532 MUC17Q685J3 4493 aa5.41□□□□□ -1.54
SNAPC4-201ENST00000298532 TNXBP22105 4242 aa5.39□□□□□ -1.55
SNAPC4-201ENST00000298532 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
SNAPC4-201ENST00000298532 FLGP20930 4061 aaPredicted RBP5.33□□□□□ -1.56
SNAPC4-201ENST00000298532 MT1LQ93083 61 aa5.33□□□□□ -1.56
SNAPC4-201ENST00000298532 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
SNAPC4-201ENST00000298532 LPAP08519 4548 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms