RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 DNAH10Q8IVF4 4471 aa7.05□□□□□ -1.28
SNAPC4-201ENST00000298532 AKAP9Q99996 3911 aa7.04□□□□□ -1.28
SNAPC4-201ENST00000298532 LCE3AQ5TA76 89 aa7.03□□□□□ -1.28
SNAPC4-201ENST00000298532 DNHD1Q96M86 4753 aa7.03□□□□□ -1.28
SNAPC4-201ENST00000298532 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
SNAPC4-201ENST00000298532 DNAH5Q8TE73 4624 aa7□□□□□ -1.29
SNAPC4-201ENST00000298532 PLECQ15149 4684 aaKnown RBP6.92□□□□□ -1.3
SNAPC4-201ENST00000298532 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
SNAPC4-201ENST00000298532 CRCT1Q9UGL9 99 aa6.83□□□□□ -1.32
SNAPC4-201ENST00000298532 VPS13CQ709C8 3753 aa6.81□□□□□ -1.32
SNAPC4-201ENST00000298532 DYNC1H1Q14204 4646 aaKnown RBP6.8□□□□□ -1.32
SNAPC4-201ENST00000298532 MT1HP80294 61 aa6.75□□□□□ -1.33
SNAPC4-201ENST00000298532 ZNF469Q96JG9 3925 aaPredicted RBP6.74□□□□□ -1.33
SNAPC4-201ENST00000298532 DNAH17Q9UFH2 4485 aa6.73□□□□□ -1.33
SNAPC4-201ENST00000298532 DNAH2Q9P225 4427 aa6.73□□□□□ -1.33
SNAPC4-201ENST00000298532 CSMD3Q7Z407 3707 aa6.7□□□□□ -1.34
SNAPC4-201ENST00000298532 KRTAP4-1Q9BYQ7 146 aa6.69□□□□□ -1.34
SNAPC4-201ENST00000298532 ANK2Q01484 3957 aa6.65□□□□□ -1.34
SNAPC4-201ENST00000298532 LRP1BQ9NZR2 4599 aa6.63□□□□□ -1.35
SNAPC4-201ENST00000298532 FAT2Q9NYQ8 4349 aa6.6□□□□□ -1.35
SNAPC4-201ENST00000298532 DYNC2H1Q8NCM8 4307 aaKnown RBP6.6□□□□□ -1.35
SNAPC4-201ENST00000298532 MT2AP02795 61 aa6.58□□□□□ -1.36
SNAPC4-201ENST00000298532 RYR1P21817 5038 aa6.57□□□□□ -1.36
SNAPC4-201ENST00000298532 STARD9Q9P2P6 4700 aa6.56□□□□□ -1.36
SNAPC4-201ENST00000298532 KRTAP8-1Q8IUC2 63 aa6.56□□□□□ -1.36
SNAPC4-201ENST00000298532 KRTAP10-5P60370 271 aa6.55□□□□□ -1.36
SNAPC4-201ENST00000298532 PRKDCP78527 4128 aaKnown RBP6.5□□□□□ -1.37
SNAPC4-201ENST00000298532 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
SNAPC4-201ENST00000298532 DNAH6Q9C0G6 4158 aa6.48□□□□□ -1.37
SNAPC4-201ENST00000298532 FAT1Q14517 4588 aa6.48□□□□□ -1.37
SNAPC4-201ENST00000298532 SACSQ9NZJ4 4579 aa6.47□□□□□ -1.37
SNAPC4-201ENST00000298532 DNAH3Q8TD57 4116 aa6.44□□□□□ -1.38
SNAPC4-201ENST00000298532 BIRC6Q9NR09 4857 aa6.43□□□□□ -1.38
SNAPC4-201ENST00000298532 RYR3Q15413 4870 aa6.41□□□□□ -1.38
SNAPC4-201ENST00000298532 RYR2Q92736 4967 aa6.39□□□□□ -1.39
SNAPC4-201ENST00000298532 DNAH8Q96JB1 4490 aa6.39□□□□□ -1.39
SNAPC4-201ENST00000298532 MT1FP04733 61 aa6.39□□□□□ -1.39
SNAPC4-201ENST00000298532 KIAA1109Q2LD37 5005 aa6.34□□□□□ -1.39
SNAPC4-201ENST00000298532 KRTAP17-1Q9BYP8 105 aa6.34□□□□□ -1.39
SNAPC4-201ENST00000298532 LCE3CQ5T5A8 94 aa6.25□□□□□ -1.41
SNAPC4-201ENST00000298532 HERC1Q15751 4861 aa6.23□□□□□ -1.41
SNAPC4-201ENST00000298532 KRTAP19-5Q3LI72 72 aa6.22□□□□□ -1.41
SNAPC4-201ENST00000298532 APOBP04114 4563 aaKnown RBP6.18□□□□□ -1.42
SNAPC4-201ENST00000298532 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
SNAPC4-201ENST00000298532 FAT3Q8TDW7 4589 aa6.17□□□□□ -1.42
SNAPC4-201ENST00000298532 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.42
SNAPC4-201ENST00000298532 HERC2O95714 4834 aa6.13□□□□□ -1.43
SNAPC4-201ENST00000298532 SPRR2FQ96RM1 72 aa6.13□□□□□ -1.43
SNAPC4-201ENST00000298532 KMT2AQ03164 3969 aa6.1□□□□□ -1.43
SNAPC4-201ENST00000298532 DNAH7Q8WXX0 4024 aa6.09□□□□□ -1.43
SNAPC4-201ENST00000298532 HSPG2P98160 4391 aa6.09□□□□□ -1.43
SNAPC4-201ENST00000298532 CMYA5Q8N3K9 4069 aa6.07□□□□□ -1.44
SNAPC4-201ENST00000298532 SPRR5A0A1B0GTR4 108 aa6.06□□□□□ -1.44
SNAPC4-201ENST00000298532 VPS13BQ7Z7G8 4022 aa6.02□□□□□ -1.45
SNAPC4-201ENST00000298532 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
SNAPC4-201ENST00000298532 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
SNAPC4-201ENST00000298532 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
SNAPC4-201ENST00000298532 LCE2CQ5TA81 110 aa5.96□□□□□ -1.45
SNAPC4-201ENST00000298532 LRP1Q07954 4544 aaKnown RBP5.95□□□□□ -1.46
SNAPC4-201ENST00000298532 PCLOQ9Y6V0 5065 aa5.94□□□□□ -1.46
SNAPC4-201ENST00000298532 PKHD1L1Q86WI1 4243 aa5.94□□□□□ -1.46
SNAPC4-201ENST00000298532 MYCBP2O75592 4640 aa5.93□□□□□ -1.46
SNAPC4-201ENST00000298532 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
SNAPC4-201ENST00000298532 LYSTQ99698 3801 aa5.87□□□□□ -1.47
SNAPC4-201ENST00000298532 SPRR2EP22531 72 aa5.86□□□□□ -1.47
SNAPC4-201ENST00000298532 SPRR2BP35325 72 aa5.86□□□□□ -1.47
SNAPC4-201ENST00000298532 SPRR2AP35326 72 aa5.86□□□□□ -1.47
SNAPC4-201ENST00000298532 MT1XP80297 61 aa5.85□□□□□ -1.47
SNAPC4-201ENST00000298532 PKD1P98161 4303 aa5.84□□□□□ -1.48
SNAPC4-201ENST00000298532 MT1BP07438 61 aa5.84□□□□□ -1.48
SNAPC4-201ENST00000298532 FRAS1Q86XX4 4008 aa5.78□□□□□ -1.48
SNAPC4-201ENST00000298532 KRTAP12-4P60329 112 aa5.77□□□□□ -1.49
SNAPC4-201ENST00000298532 HYDINQ4G0P3 5121 aa5.76□□□□□ -1.49
SNAPC4-201ENST00000298532 HECTD4Q9Y4D8 3996 aa5.76□□□□□ -1.49
SNAPC4-201ENST00000298532 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
SNAPC4-201ENST00000298532 SPRR2DP22532 72 aa5.7□□□□□ -1.5
SNAPC4-201ENST00000298532 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
SNAPC4-201ENST00000298532 LCE2BO14633 110 aa5.66□□□□□ -1.5
SNAPC4-201ENST00000298532 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
SNAPC4-201ENST00000298532 KRTAP9-2Q9BYQ4 174 aa5.64□□□□□ -1.51
SNAPC4-201ENST00000298532 MT1GP13640 62 aa5.61□□□□□ -1.51
SNAPC4-201ENST00000298532 ABCA13Q86UQ4 5058 aa5.59□□□□□ -1.51
SNAPC4-201ENST00000298532 KMT2CQ8NEZ4 4911 aaKnown RBP5.57□□□□□ -1.52
SNAPC4-201ENST00000298532 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
SNAPC4-201ENST00000298532 LRP2P98164 4655 aa5.55□□□□□ -1.52
SNAPC4-201ENST00000298532 KRTAP19-6Q3LI70 58 aa5.55□□□□□ -1.52
SNAPC4-201ENST00000298532 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
SNAPC4-201ENST00000298532 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
SNAPC4-201ENST00000298532 PKHD1P08F94 4074 aa5.52□□□□□ -1.53
SNAPC4-201ENST00000298532 EPPK1P58107 5090 aaKnown RBP5.48□□□□□ -1.53
SNAPC4-201ENST00000298532 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
SNAPC4-201ENST00000298532 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.54
SNAPC4-201ENST00000298532 LCE3EQ5T5B0 92 aa5.42□□□□□ -1.54
SNAPC4-201ENST00000298532 MUC17Q685J3 4493 aa5.41□□□□□ -1.54
SNAPC4-201ENST00000298532 TNXBP22105 4242 aa5.39□□□□□ -1.55
SNAPC4-201ENST00000298532 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
SNAPC4-201ENST00000298532 FLGP20930 4061 aaPredicted RBP5.33□□□□□ -1.56
SNAPC4-201ENST00000298532 MT1LQ93083 61 aa5.33□□□□□ -1.56
SNAPC4-201ENST00000298532 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
SNAPC4-201ENST00000298532 LPAP08519 4548 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms