RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 PLECQ15149 4684 aaKnown RBP7.41□□□□□ -1.22
TRIM9-201ENST00000298355 DNAH1Q9P2D7 4330 aa7.37□□□□□ -1.23
TRIM9-201ENST00000298355 KRTAP4-5Q9BYR2 181 aa7.34□□□□□ -1.23
TRIM9-201ENST00000298355 DNAH5Q8TE73 4624 aa7.33□□□□□ -1.24
TRIM9-201ENST00000298355 LCE3AQ5TA76 89 aa7.31□□□□□ -1.24
TRIM9-201ENST00000298355 VPS13DQ5THJ4 4388 aa7.29□□□□□ -1.24
TRIM9-201ENST00000298355 KRTAP10-12P60413 245 aa7.28□□□□□ -1.24
TRIM9-201ENST00000298355 KRTAP12-3P60328 96 aa7.27□□□□□ -1.25
TRIM9-201ENST00000298355 DNAH11Q96DT5 4516 aa7.27□□□□□ -1.25
TRIM9-201ENST00000298355 DNHD1Q96M86 4753 aa7.25□□□□□ -1.25
TRIM9-201ENST00000298355 DNAH17Q9UFH2 4485 aa7.24□□□□□ -1.25
TRIM9-201ENST00000298355 DNAH10Q8IVF4 4471 aa7.23□□□□□ -1.25
TRIM9-201ENST00000298355 STARD9Q9P2P6 4700 aa7.16□□□□□ -1.26
TRIM9-201ENST00000298355 DNAH8Q96JB1 4490 aa7.11□□□□□ -1.27
TRIM9-201ENST00000298355 DNAH2Q9P225 4427 aa7.08□□□□□ -1.28
TRIM9-201ENST00000298355 DYNC1H1Q14204 4646 aaKnown RBP7.07□□□□□ -1.28
TRIM9-201ENST00000298355 DNAH3Q8TD57 4116 aa7.02□□□□□ -1.29
TRIM9-201ENST00000298355 LRP1BQ9NZR2 4599 aa7.01□□□□□ -1.29
TRIM9-201ENST00000298355 PRKDCP78527 4128 aaKnown RBP7.01□□□□□ -1.29
TRIM9-201ENST00000298355 ANK2Q01484 3957 aa7□□□□□ -1.29
TRIM9-201ENST00000298355 FAT1Q14517 4588 aa6.98□□□□□ -1.29
TRIM9-201ENST00000298355 CRCT1Q9UGL9 99 aa6.96□□□□□ -1.3
TRIM9-201ENST00000298355 DYNC2H1Q8NCM8 4307 aaKnown RBP6.94□□□□□ -1.3
TRIM9-201ENST00000298355 SACSQ9NZJ4 4579 aa6.87□□□□□ -1.31
TRIM9-201ENST00000298355 KMT2AQ03164 3969 aa6.86□□□□□ -1.31
TRIM9-201ENST00000298355 FAT2Q9NYQ8 4349 aa6.85□□□□□ -1.31
TRIM9-201ENST00000298355 KRTAP4-1Q9BYQ7 146 aa6.8□□□□□ -1.32
TRIM9-201ENST00000298355 CMYA5Q8N3K9 4069 aa6.8□□□□□ -1.32
TRIM9-201ENST00000298355 RYR1P21817 5038 aa6.79□□□□□ -1.32
TRIM9-201ENST00000298355 SPRR5A0A1B0GTR4 108 aa6.73□□□□□ -1.33
TRIM9-201ENST00000298355 VPS13BQ7Z7G8 4022 aa6.71□□□□□ -1.34
TRIM9-201ENST00000298355 KRTAP8-1Q8IUC2 63 aa6.66□□□□□ -1.34
TRIM9-201ENST00000298355 SPRR2GQ9BYE4 73 aa6.66□□□□□ -1.34
TRIM9-201ENST00000298355 DNAH6Q9C0G6 4158 aa6.65□□□□□ -1.34
TRIM9-201ENST00000298355 FRAS1Q86XX4 4008 aa6.65□□□□□ -1.35
TRIM9-201ENST00000298355 KRTAP10-5P60370 271 aa6.65□□□□□ -1.35
TRIM9-201ENST00000298355 LYSTQ99698 3801 aa6.65□□□□□ -1.35
TRIM9-201ENST00000298355 APOBP04114 4563 aaKnown RBP6.65□□□□□ -1.35
TRIM9-201ENST00000298355 KIAA1109Q2LD37 5005 aa6.61□□□□□ -1.35
TRIM9-201ENST00000298355 HECTD4Q9Y4D8 3996 aa6.58□□□□□ -1.36
TRIM9-201ENST00000298355 DNAH7Q8WXX0 4024 aa6.57□□□□□ -1.36
TRIM9-201ENST00000298355 KRTAP17-1Q9BYP8 105 aa6.55□□□□□ -1.36
TRIM9-201ENST00000298355 RYR3Q15413 4870 aa6.54□□□□□ -1.36
TRIM9-201ENST00000298355 MT1HP80294 61 aa6.53□□□□□ -1.36
TRIM9-201ENST00000298355 MYCBP2O75592 4640 aa6.52□□□□□ -1.37
TRIM9-201ENST00000298355 LCE3CQ5T5A8 94 aa6.5□□□□□ -1.37
TRIM9-201ENST00000298355 LRP1Q07954 4544 aaKnown RBP6.46□□□□□ -1.38
TRIM9-201ENST00000298355 RYR2Q92736 4967 aa6.45□□□□□ -1.38
TRIM9-201ENST00000298355 MT2AP02795 61 aa6.44□□□□□ -1.38
TRIM9-201ENST00000298355 KRTAP19-4Q3LI73 84 aa6.43□□□□□ -1.38
TRIM9-201ENST00000298355 KRTAP19-5Q3LI72 72 aa6.41□□□□□ -1.38
TRIM9-201ENST00000298355 HYDINQ4G0P3 5121 aa6.4□□□□□ -1.39
TRIM9-201ENST00000298355 FAT3Q8TDW7 4589 aa6.36□□□□□ -1.39
TRIM9-201ENST00000298355 MT1FP04733 61 aa6.34□□□□□ -1.39
TRIM9-201ENST00000298355 KRTAP19-1Q8IUB9 90 aa6.26□□□□□ -1.41
TRIM9-201ENST00000298355 PKHD1P08F94 4074 aa6.25□□□□□ -1.41
TRIM9-201ENST00000298355 KRTAP10-7P60409 375 aaPredicted RBP6.24□□□□□ -1.41
TRIM9-201ENST00000298355 HSPG2P98160 4391 aa6.21□□□□□ -1.41
TRIM9-201ENST00000298355 HERC2O95714 4834 aa6.2□□□□□ -1.42
TRIM9-201ENST00000298355 PKD1P98161 4303 aa6.17□□□□□ -1.42
TRIM9-201ENST00000298355 KRTAP19-8Q3LI54 63 aa6.14□□□□□ -1.43
TRIM9-201ENST00000298355 LRP2P98164 4655 aa6.13□□□□□ -1.43
TRIM9-201ENST00000298355 MT1XP80297 61 aa6.09□□□□□ -1.43
TRIM9-201ENST00000298355 BIRC6Q9NR09 4857 aa6.07□□□□□ -1.44
TRIM9-201ENST00000298355 KRTAP12-4P60329 112 aa6.06□□□□□ -1.44
TRIM9-201ENST00000298355 SPRR2FQ96RM1 72 aa6.02□□□□□ -1.45
TRIM9-201ENST00000298355 KMT2CQ8NEZ4 4911 aaKnown RBP6□□□□□ -1.45
TRIM9-201ENST00000298355 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
TRIM9-201ENST00000298355 MT1BP07438 61 aa5.94□□□□□ -1.46
TRIM9-201ENST00000298355 PKHD1L1Q86WI1 4243 aa5.94□□□□□ -1.46
TRIM9-201ENST00000298355 HERC1Q15751 4861 aa5.94□□□□□ -1.46
TRIM9-201ENST00000298355 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
TRIM9-201ENST00000298355 TNXBP22105 4242 aa5.91□□□□□ -1.46
TRIM9-201ENST00000298355 LPAP08519 4548 aa5.9□□□□□ -1.46
TRIM9-201ENST00000298355 PCLOQ9Y6V0 5065 aa5.85□□□□□ -1.47
TRIM9-201ENST00000298355 KRTAP19-2Q3LHN2 52 aa5.82□□□□□ -1.48
TRIM9-201ENST00000298355 LCE3BQ5TA77 95 aa5.76□□□□□ -1.49
TRIM9-201ENST00000298355 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
TRIM9-201ENST00000298355 EPPK1P58107 5090 aaKnown RBP5.75□□□□□ -1.49
TRIM9-201ENST00000298355 ABCA13Q86UQ4 5058 aa5.73□□□□□ -1.49
TRIM9-201ENST00000298355 MT1GP13640 62 aa5.73□□□□□ -1.49
TRIM9-201ENST00000298355 KRTAP4-8A0A0G2JLE6 195 aa5.72□□□□□ -1.49
TRIM9-201ENST00000298355 KRTAP4-8Q9BYQ9 185 aa5.72□□□□□ -1.49
TRIM9-201ENST00000298355 MUC17Q685J3 4493 aa5.71□□□□□ -1.5
TRIM9-201ENST00000298355 SPRR2EP22531 72 aa5.66□□□□□ -1.5
TRIM9-201ENST00000298355 SPRR2BP35325 72 aa5.66□□□□□ -1.5
TRIM9-201ENST00000298355 SPRR2AP35326 72 aa5.66□□□□□ -1.5
TRIM9-201ENST00000298355 FLGP20930 4061 aaPredicted RBP5.65□□□□□ -1.5
TRIM9-201ENST00000298355 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
TRIM9-201ENST00000298355 LCE3DQ9BYE3 92 aa5.6□□□□□ -1.51
TRIM9-201ENST00000298355 LCE3EQ5T5B0 92 aa5.56□□□□□ -1.52
TRIM9-201ENST00000298355 LCE2BO14633 110 aa5.52□□□□□ -1.53
TRIM9-201ENST00000298355 SPRR2DP22532 72 aa5.52□□□□□ -1.53
TRIM9-201ENST00000298355 MT1LQ93083 61 aa5.51□□□□□ -1.53
TRIM9-201ENST00000298355 KRTAP2-3P0C7H8 128 aa5.46□□□□□ -1.54
TRIM9-201ENST00000298355 KRTAP2-4Q9BYR9 128 aa5.46□□□□□ -1.54
TRIM9-201ENST00000298355 KRTAP2-1Q9BYU5 128 aa5.46□□□□□ -1.54
TRIM9-201ENST00000298355 RNF213Q63HN8 5207 aa5.39□□□□□ -1.55
TRIM9-201ENST00000298355 MT1EP04732 61 aa5.39□□□□□ -1.55
TRIM9-201ENST00000298355 FAT4Q6V0I7 4981 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms