RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 NISCHQ9Y2I1 1504 aa28.42■■■□□ 2.14
TRIM9-201ENST00000298355 PELP1Q8IZL8 1130 aaKnown RBP27.95■■■□□ 2.07
TRIM9-201ENST00000298355 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
TRIM9-201ENST00000298355 DCAF8L2P0C7V8 631 aa27.58■■■□□ 2.01
TRIM9-201ENST00000298355 MYT1Q01538 1121 aa27.54■■■□□ 2
TRIM9-201ENST00000298355 PCGF6Q9BYE7 350 aa27.31■■□□□ 1.96
TRIM9-201ENST00000298355 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
TRIM9-201ENST00000298355 CENPBP07199 599 aaPredicted RBP26.89■■□□□ 1.89
TRIM9-201ENST00000298355 HRCP23327 699 aa26.87■■□□□ 1.89
TRIM9-201ENST00000298355 ZEB1P37275 1124 aaPredicted RBP26.84■■□□□ 1.89
TRIM9-201ENST00000298355 EHMT2Q96KQ7 1210 aa26.46■■□□□ 1.83
TRIM9-201ENST00000298355 PPARGC1BQ86YN6 1023 aaKnown RBP26.22■■□□□ 1.79
TRIM9-201ENST00000298355 ERICH6Q7L0X2 663 aa26.17■■□□□ 1.78
TRIM9-201ENST00000298355 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
TRIM9-201ENST00000298355 TRIM26Q12899 539 aaPredicted RBP26.08■■□□□ 1.77
TRIM9-201ENST00000298355 YTHDC1Q96MU7 727 aaKnown RBP26.03■■□□□ 1.76
TRIM9-201ENST00000298355 FAM9AQ8IZU1 332 aaPredicted RBP26.01■■□□□ 1.75
TRIM9-201ENST00000298355 TTBK1Q5TCY1 1321 aaPredicted RBP25.83■■□□□ 1.73
TRIM9-201ENST00000298355 APLP2Q06481 763 aa25.76■■□□□ 1.71
TRIM9-201ENST00000298355 NEFLP07196 543 aa25.63■■□□□ 1.69
TRIM9-201ENST00000298355 TRIM41Q8WV44 630 aa25.59■■□□□ 1.69
TRIM9-201ENST00000298355 CHIC1Q5VXU3 224 aa25.53■■□□□ 1.68
TRIM9-201ENST00000298355 GTF3C3Q9Y5Q9 886 aa25.52■■□□□ 1.68
TRIM9-201ENST00000298355 LOC105371045A0A1W2PR82 267 aa25.43■■□□□ 1.66
TRIM9-201ENST00000298355 DIEXFQ68CQ4 756 aaKnown RBP25.41■■□□□ 1.66
TRIM9-201ENST00000298355 ACIN1Q9UKV3 1341 aaKnown RBP25.32■■□□□ 1.64
TRIM9-201ENST00000298355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.09■■□□□ 1.61
TRIM9-201ENST00000298355 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
TRIM9-201ENST00000298355 UBTFP17480 764 aaKnown RBP24.96■■□□□ 1.59
TRIM9-201ENST00000298355 RANGAP1P46060 587 aaPredicted RBP24.86■■□□□ 1.57
TRIM9-201ENST00000298355 NEUROD1Q13562 356 aa24.78■■□□□ 1.56
TRIM9-201ENST00000298355 RTL5Q5HYW3 569 aaPredicted RBP24.76■■□□□ 1.55
TRIM9-201ENST00000298355 ZNF316A6NFI3 1004 aaPredicted RBP24.69■■□□□ 1.54
TRIM9-201ENST00000298355 HNRNPUL2Q1KMD3 747 aaKnown RBP24.68■■□□□ 1.54
TRIM9-201ENST00000298355 BCANQ96GW7 911 aa24.67■■□□□ 1.54
TRIM9-201ENST00000298355 DAXXQ9UER7 740 aaPredicted RBP24.59■■□□□ 1.53
TRIM9-201ENST00000298355 DCAF1Q9Y4B6 1507 aa24.57■■□□□ 1.52
TRIM9-201ENST00000298355 CLSPNQ9HAW4 1339 aa24.51■■□□□ 1.51
TRIM9-201ENST00000298355 CDK11AQ9UQ88 783 aaPredicted RBP24.43■■□□□ 1.5
TRIM9-201ENST00000298355 ATP1B4Q9UN42 357 aaPredicted RBP24.34■■□□□ 1.49
TRIM9-201ENST00000298355 ITGAEP38570 1179 aa24.28■■□□□ 1.48
TRIM9-201ENST00000298355 ANP32EQ9BTT0 268 aa24.25■■□□□ 1.47
TRIM9-201ENST00000298355 MYT1LQ9UL68 1186 aa24.23■■□□□ 1.47
TRIM9-201ENST00000298355 FKBP8Q14318 412 aa24.12■■□□□ 1.45
TRIM9-201ENST00000298355 BCL11AQ9H165 835 aa24.1■■□□□ 1.45
TRIM9-201ENST00000298355 ANP32CO43423 234 aa24.07■■□□□ 1.44
TRIM9-201ENST00000298355 EIF5BO60841 1220 aaKnown RBP24.03■■□□□ 1.44
TRIM9-201ENST00000298355 MYO15BQ96JP2 1530 aa24.01■■□□□ 1.43
TRIM9-201ENST00000298355 MIER1Q8N108 512 aa23.99■■□□□ 1.43
TRIM9-201ENST00000298355 ANP32AP39687 249 aaKnown RBP23.98■■□□□ 1.43
TRIM9-201ENST00000298355 POLR3GLQ9BT43 218 aa23.96■■□□□ 1.43
TRIM9-201ENST00000298355 ABCC9O60706 1549 aa23.92■■□□□ 1.42
TRIM9-201ENST00000298355 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
TRIM9-201ENST00000298355 CNGB1Q14028 1251 aaPredicted RBP23.9■■□□□ 1.42
TRIM9-201ENST00000298355 NBR1Q14596 966 aa23.78■■□□□ 1.4
TRIM9-201ENST00000298355 GLIPR1L2Q4G1C9 344 aa23.78■■□□□ 1.4
TRIM9-201ENST00000298355 NPM2Q86SE8 214 aaKnown RBP23.66■■□□□ 1.38
TRIM9-201ENST00000298355 ZCCHC6Q5VYS8 1495 aaKnown RBP23.66■■□□□ 1.38
TRIM9-201ENST00000298355 SUPT16HQ9Y5B9 1047 aaKnown RBP23.63■■□□□ 1.37
TRIM9-201ENST00000298355 ZBTB47Q9UFB7 747 aaPredicted RBP23.61■■□□□ 1.37
TRIM9-201ENST00000298355 FAM50AQ14320 339 aaKnown RBP23.6■■□□□ 1.37
TRIM9-201ENST00000298355 HNRNPUQ00839 825 aaKnown RBP eCLIP23.54■■□□□ 1.36
TRIM9-201ENST00000298355 TRIM52Q96A61 297 aa23.54■■□□□ 1.36
TRIM9-201ENST00000298355 DDX10Q13206 875 aaKnown RBP23.53■■□□□ 1.36
TRIM9-201ENST00000298355 PABPN1Q86U42 306 aaKnown RBP eCLIP23.52■■□□□ 1.36
TRIM9-201ENST00000298355 CSRNP3Q8WYN3 585 aa23.5■■□□□ 1.35
TRIM9-201ENST00000298355 IRX6P78412 446 aaPredicted RBP23.37■■□□□ 1.33
TRIM9-201ENST00000298355 CCDC136Q96JN2 1154 aa23.35■■□□□ 1.33
TRIM9-201ENST00000298355 TSHZ2Q9NRE2 1034 aa23.33■■□□□ 1.33
TRIM9-201ENST00000298355 RBM19Q9Y4C8 960 aaKnown RBP23.32■■□□□ 1.32
TRIM9-201ENST00000298355 DEKP35659 375 aaKnown RBP23.31■■□□□ 1.32
TRIM9-201ENST00000298355 RTN4Q9NQC3 1192 aaKnown RBP23.27■■□□□ 1.32
TRIM9-201ENST00000298355 FAM9BQ8IZU0 186 aa23.24■■□□□ 1.31
TRIM9-201ENST00000298355 SCRIBQ14160 1630 aa23.24■■□□□ 1.31
TRIM9-201ENST00000298355 NOP58Q9Y2X3 529 aaKnown RBP23.2■■□□□ 1.31
TRIM9-201ENST00000298355 TONSLQ96HA7 1378 aa23.13■■□□□ 1.29
TRIM9-201ENST00000298355 NEFMP07197 916 aa23.12■■□□□ 1.29
TRIM9-201ENST00000298355 ANP32BQ92688 251 aaKnown RBP23.12■■□□□ 1.29
TRIM9-201ENST00000298355 ZNF326Q5BKZ1 582 aaKnown RBP23.09■■□□□ 1.29
TRIM9-201ENST00000298355 PPM1GO15355 546 aaPredicted RBP23.07■■□□□ 1.28
TRIM9-201ENST00000298355 PPP4R2Q9NY27 417 aa23.06■■□□□ 1.28
TRIM9-201ENST00000298355 DDRGK1Q96HY6 314 aa23.05■■□□□ 1.28
TRIM9-201ENST00000298355 ERICH6BQ5W0A0 696 aa23.04■■□□□ 1.28
TRIM9-201ENST00000298355 CANXP27824 592 aaKnown RBP23.03■■□□□ 1.28
TRIM9-201ENST00000298355 MRS2Q9HD23 443 aa23.03■■□□□ 1.28
TRIM9-201ENST00000298355 ARXQ96QS3 562 aa23.01■■□□□ 1.27
TRIM9-201ENST00000298355 HIRIP3Q9BW71 556 aaPredicted RBP22.99■■□□□ 1.27
TRIM9-201ENST00000298355 UPF2Q9HAU5 1272 aaKnown RBP22.97■■□□□ 1.27
TRIM9-201ENST00000298355 LAS1LQ9Y4W2 734 aaKnown RBP22.95■■□□□ 1.26
TRIM9-201ENST00000298355 CEP162Q5TB80 1403 aa22.9■■□□□ 1.26
TRIM9-201ENST00000298355 SLC4A1APQ9BWU0 796 aaKnown RBP22.9■■□□□ 1.26
TRIM9-201ENST00000298355 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.87■■□□□ 1.25
TRIM9-201ENST00000298355 TMC1Q8TDI8 760 aa22.85■■□□□ 1.25
TRIM9-201ENST00000298355 NAP1L5Q96NT1 182 aaPredicted RBP22.84■■□□□ 1.25
TRIM9-201ENST00000298355 B4GALNT3Q6L9W6 998 aa22.83■■□□□ 1.25
TRIM9-201ENST00000298355 SALL2Q9Y467 1007 aaPredicted RBP22.83■■□□□ 1.25
TRIM9-201ENST00000298355 HSP90AA1P07900 732 aaKnown RBP22.82■■□□□ 1.24
TRIM9-201ENST00000298355 TRIM44Q96DX7 344 aaPredicted RBP22.78■■□□□ 1.24
TRIM9-201ENST00000298355 CLIP1P30622 1438 aa22.76■■□□□ 1.23
TRIM9-201ENST00000298355 CCER2I3L3R5 266 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms