RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 DYNC2H1Q8NCM8 4307 aaKnown RBP8.43□□□□□ -1.06
SBSPON-201ENST00000297354 CAMK2N1Q7Z7J9 78 aa8.4□□□□□ -1.06
SBSPON-201ENST00000297354 KRTAP12-1P59990 96 aa8.38□□□□□ -1.07
SBSPON-201ENST00000297354 KRTAP3-2Q9BYR7 98 aa8.37□□□□□ -1.07
SBSPON-201ENST00000297354 KRTAP3-3Q9BYR6 98 aa8.37□□□□□ -1.07
SBSPON-201ENST00000297354 PLAC4Q8WY50 150 aa8.37□□□□□ -1.07
SBSPON-201ENST00000297354 MYCBP2O75592 4640 aa8.36□□□□□ -1.07
SBSPON-201ENST00000297354 FAT1Q14517 4588 aa8.36□□□□□ -1.07
SBSPON-201ENST00000297354 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
SBSPON-201ENST00000297354 DNAH5Q8TE73 4624 aa8.32□□□□□ -1.08
SBSPON-201ENST00000297354 HYDINQ4G0P3 5121 aa8.29□□□□□ -1.08
SBSPON-201ENST00000297354 XP32Q5T750 250 aa8.29□□□□□ -1.08
SBSPON-201ENST00000297354 Q5VSD8 79 aa8.21□□□□□ -1.09
SBSPON-201ENST00000297354 PKHD1P08F94 4074 aa8.16□□□□□ -1.1
SBSPON-201ENST00000297354 FAT2Q9NYQ8 4349 aa8.1□□□□□ -1.11
SBSPON-201ENST00000297354 DYNC1H1Q14204 4646 aaKnown RBP8.05□□□□□ -1.12
SBSPON-201ENST00000297354 APOBP04114 4563 aaKnown RBP8.03□□□□□ -1.12
SBSPON-201ENST00000297354 PKD1P98161 4303 aa8.01□□□□□ -1.13
SBSPON-201ENST00000297354 LRP1Q07954 4544 aaKnown RBP7.97□□□□□ -1.13
SBSPON-201ENST00000297354 FAT3Q8TDW7 4589 aa7.95□□□□□ -1.14
SBSPON-201ENST00000297354 SACSQ9NZJ4 4579 aa7.9□□□□□ -1.14
SBSPON-201ENST00000297354 A0A1B0GVY2 172 aa7.86□□□□□ -1.15
SBSPON-201ENST00000297354 KRTAP10-4P60372 401 aaPredicted RBP7.86□□□□□ -1.15
SBSPON-201ENST00000297354 LORP23490 312 aaPredicted RBP7.83□□□□□ -1.16
SBSPON-201ENST00000297354 HSPG2P98160 4391 aa7.77□□□□□ -1.17
SBSPON-201ENST00000297354 KMT2CQ8NEZ4 4911 aaKnown RBP7.76□□□□□ -1.17
SBSPON-201ENST00000297354 J3QL48 77 aa7.76□□□□□ -1.17
SBSPON-201ENST00000297354 TNP1P09430 55 aa7.74□□□□□ -1.17
SBSPON-201ENST00000297354 PP632Q6XCG6 107 aa7.72□□□□□ -1.17
SBSPON-201ENST00000297354 SEC61BP60468 96 aaKnown RBP7.71□□□□□ -1.18
SBSPON-201ENST00000297354 LRP2P98164 4655 aa7.69□□□□□ -1.18
SBSPON-201ENST00000297354 KRTAP21-3Q3LHN1 58 aa7.68□□□□□ -1.18
SBSPON-201ENST00000297354 KIAA1109Q2LD37 5005 aa7.63□□□□□ -1.19
SBSPON-201ENST00000297354 RYR2Q92736 4967 aa7.59□□□□□ -1.19
SBSPON-201ENST00000297354 LPAP08519 4548 aa7.56□□□□□ -1.2
SBSPON-201ENST00000297354 M0R2T5 61 aa7.55□□□□□ -1.2
SBSPON-201ENST00000297354 PKHD1L1Q86WI1 4243 aa7.54□□□□□ -1.2
SBSPON-201ENST00000297354 RYR3Q15413 4870 aa7.51□□□□□ -1.21
SBSPON-201ENST00000297354 RYR1P21817 5038 aa7.51□□□□□ -1.21
SBSPON-201ENST00000297354 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
SBSPON-201ENST00000297354 KRTAP17-1Q9BYP8 105 aa7.46□□□□□ -1.21
SBSPON-201ENST00000297354 TNXBP22105 4242 aa7.38□□□□□ -1.23
SBSPON-201ENST00000297354 KRTAP4-5Q9BYR2 181 aa7.36□□□□□ -1.23
SBSPON-201ENST00000297354 KRTAP4-1Q9BYQ7 146 aa7.24□□□□□ -1.25
SBSPON-201ENST00000297354 EPPK1P58107 5090 aaKnown RBP7.22□□□□□ -1.25
SBSPON-201ENST00000297354 ABCA13Q86UQ4 5058 aa7.19□□□□□ -1.26
SBSPON-201ENST00000297354 MUC2Q02817 5179 aa7.1□□□□□ -1.27
SBSPON-201ENST00000297354 PRO2289Q9P1D8 64 aa7.09□□□□□ -1.27
SBSPON-201ENST00000297354 LCE3AQ5TA76 89 aa7.07□□□□□ -1.28
SBSPON-201ENST00000297354 KRTAP10-10P60014 251 aa7.04□□□□□ -1.28
SBSPON-201ENST00000297354 HERC2O95714 4834 aa6.98□□□□□ -1.29
SBSPON-201ENST00000297354 INE1O15225 51 aa6.85□□□□□ -1.31
SBSPON-201ENST00000297354 SPRR5A0A1B0GTR4 108 aa6.8□□□□□ -1.32
SBSPON-201ENST00000297354 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
SBSPON-201ENST00000297354 FAT4Q6V0I7 4981 aa6.76□□□□□ -1.33
SBSPON-201ENST00000297354 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
SBSPON-201ENST00000297354 HERC1Q15751 4861 aa6.74□□□□□ -1.33
SBSPON-201ENST00000297354 RNF213Q63HN8 5207 aa6.7□□□□□ -1.34
SBSPON-201ENST00000297354 MUC17Q685J3 4493 aa6.67□□□□□ -1.34
SBSPON-201ENST00000297354 KRTAP10-12P60413 245 aa6.66□□□□□ -1.34
SBSPON-201ENST00000297354 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
SBSPON-201ENST00000297354 KRTAP19-2Q3LHN2 52 aa6.54□□□□□ -1.36
SBSPON-201ENST00000297354 PCLOQ9Y6V0 5065 aa6.5□□□□□ -1.37
SBSPON-201ENST00000297354 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
SBSPON-201ENST00000297354 UBR4Q5T4S7 5183 aa6.47□□□□□ -1.37
SBSPON-201ENST00000297354 HMCN2Q8NDA2 5059 aa6.47□□□□□ -1.37
SBSPON-201ENST00000297354 KRTAP8-1Q8IUC2 63 aa6.46□□□□□ -1.38
SBSPON-201ENST00000297354 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.38
SBSPON-201ENST00000297354 MT1FP04733 61 aa6.43□□□□□ -1.38
SBSPON-201ENST00000297354 BIRC6Q9NR09 4857 aa6.43□□□□□ -1.38
SBSPON-201ENST00000297354 MT2AP02795 61 aa6.37□□□□□ -1.39
SBSPON-201ENST00000297354 KRTAP10-7P60409 375 aaPredicted RBP6.35□□□□□ -1.39
SBSPON-201ENST00000297354 MT1HP80294 61 aa6.3□□□□□ -1.4
SBSPON-201ENST00000297354 LCE2CQ5TA81 110 aa6.25□□□□□ -1.41
SBSPON-201ENST00000297354 KRTAP19-5Q3LI72 72 aa6.24□□□□□ -1.41
SBSPON-201ENST00000297354 MT1XP80297 61 aa6.24□□□□□ -1.41
SBSPON-201ENST00000297354 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
SBSPON-201ENST00000297354 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.42
SBSPON-201ENST00000297354 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
SBSPON-201ENST00000297354 KMT2DO14686 5537 aa6.19□□□□□ -1.42
SBSPON-201ENST00000297354 LCE3CQ5T5A8 94 aa6.16□□□□□ -1.42
SBSPON-201ENST00000297354 MT1BP07438 61 aa6.13□□□□□ -1.43
SBSPON-201ENST00000297354 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
SBSPON-201ENST00000297354 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
SBSPON-201ENST00000297354 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
SBSPON-201ENST00000297354 USH2AO75445 5202 aa6.06□□□□□ -1.44
SBSPON-201ENST00000297354 OBSCNQ5VST9 7968 aa6.05□□□□□ -1.44
SBSPON-201ENST00000297354 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
SBSPON-201ENST00000297354 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
SBSPON-201ENST00000297354 SYNE1Q8NF91 8797 aaKnown RBP5.95□□□□□ -1.46
SBSPON-201ENST00000297354 KRTAP9-6A8MVA2 160 aa5.87□□□□□ -1.47
SBSPON-201ENST00000297354 DSTQ03001 7570 aaKnown RBP5.82□□□□□ -1.48
SBSPON-201ENST00000297354 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
SBSPON-201ENST00000297354 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
SBSPON-201ENST00000297354 KRTAP12-4P60329 112 aa5.72□□□□□ -1.49
SBSPON-201ENST00000297354 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
SBSPON-201ENST00000297354 LCE2BO14633 110 aa5.62□□□□□ -1.51
SBSPON-201ENST00000297354 MT1GP13640 62 aa5.6□□□□□ -1.51
SBSPON-201ENST00000297354 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
SBSPON-201ENST00000297354 KRTAP2-3P0C7H8 128 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms