RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 P0C880 135 aa7.93□□□□□ -1.14
CAPN2-201ENST00000295006 KRTAP10-4P60372 401 aaPredicted RBP7.93□□□□□ -1.14
CAPN2-201ENST00000295006 PKD1P98161 4303 aa7.92□□□□□ -1.14
CAPN2-201ENST00000295006 LRP1Q07954 4544 aaKnown RBP7.92□□□□□ -1.14
CAPN2-201ENST00000295006 C10orf95Q9H7T3 257 aa7.91□□□□□ -1.14
CAPN2-201ENST00000295006 SACSQ9NZJ4 4579 aa7.86□□□□□ -1.15
CAPN2-201ENST00000295006 KRTAP13-4Q3LI77 160 aa7.86□□□□□ -1.15
CAPN2-201ENST00000295006 APOBP04114 4563 aaKnown RBP7.81□□□□□ -1.16
CAPN2-201ENST00000295006 KRTAP10-6P60371 365 aaPredicted RBP7.79□□□□□ -1.16
CAPN2-201ENST00000295006 FAT3Q8TDW7 4589 aa7.78□□□□□ -1.16
CAPN2-201ENST00000295006 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
CAPN2-201ENST00000295006 M0QZ58 72 aa7.75□□□□□ -1.17
CAPN2-201ENST00000295006 KRTAP21-3Q3LHN1 58 aa7.75□□□□□ -1.17
CAPN2-201ENST00000295006 J3QL48 77 aa7.75□□□□□ -1.17
CAPN2-201ENST00000295006 R4GN34 69 aa7.74□□□□□ -1.17
CAPN2-201ENST00000295006 KMT2CQ8NEZ4 4911 aaKnown RBP7.7□□□□□ -1.18
CAPN2-201ENST00000295006 KRTAP12-2P59991 146 aa7.69□□□□□ -1.18
CAPN2-201ENST00000295006 KIAA1109Q2LD37 5005 aa7.68□□□□□ -1.18
CAPN2-201ENST00000295006 KRTAP3-2Q9BYR7 98 aa7.67□□□□□ -1.18
CAPN2-201ENST00000295006 NDUFAF8A1L188 74 aa7.66□□□□□ -1.18
CAPN2-201ENST00000295006 TPRXLQ17RH7 258 aa7.64□□□□□ -1.19
CAPN2-201ENST00000295006 RYR1P21817 5038 aa7.6□□□□□ -1.19
CAPN2-201ENST00000295006 HSPG2P98160 4391 aa7.58□□□□□ -1.2
CAPN2-201ENST00000295006 MT1HL1P0DM35 61 aa7.57□□□□□ -1.2
CAPN2-201ENST00000295006 KRTAP17-1Q9BYP8 105 aa7.55□□□□□ -1.2
CAPN2-201ENST00000295006 RYR3Q15413 4870 aa7.54□□□□□ -1.2
CAPN2-201ENST00000295006 KRTAP12-1P59990 96 aa7.54□□□□□ -1.2
CAPN2-201ENST00000295006 RYR2Q92736 4967 aa7.53□□□□□ -1.2
CAPN2-201ENST00000295006 CAMK2N1Q7Z7J9 78 aa7.53□□□□□ -1.2
CAPN2-201ENST00000295006 LRP2P98164 4655 aa7.53□□□□□ -1.2
CAPN2-201ENST00000295006 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
CAPN2-201ENST00000295006 PKHD1L1Q86WI1 4243 aa7.49□□□□□ -1.21
CAPN2-201ENST00000295006 KRTAP4-5Q9BYR2 181 aa7.46□□□□□ -1.21
CAPN2-201ENST00000295006 LPAP08519 4548 aa7.38□□□□□ -1.23
CAPN2-201ENST00000295006 TNXBP22105 4242 aa7.31□□□□□ -1.24
CAPN2-201ENST00000295006 LORP23490 312 aaPredicted RBP7.29□□□□□ -1.24
CAPN2-201ENST00000295006 M0R2T5 61 aa7.23□□□□□ -1.25
CAPN2-201ENST00000295006 A0A0A0MQY5 61 aa7.22□□□□□ -1.25
CAPN2-201ENST00000295006 EPPK1P58107 5090 aaKnown RBP7.17□□□□□ -1.26
CAPN2-201ENST00000295006 ABCA13Q86UQ4 5058 aa7.16□□□□□ -1.26
CAPN2-201ENST00000295006 LUZP6Q538Z0 58 aa7.15□□□□□ -1.26
CAPN2-201ENST00000295006 PLAC4Q8WY50 150 aa7.15□□□□□ -1.26
CAPN2-201ENST00000295006 KRTAP4-1Q9BYQ7 146 aa7.15□□□□□ -1.26
CAPN2-201ENST00000295006 KRTAP15-1Q3LI76 137 aa7.12□□□□□ -1.27
CAPN2-201ENST00000295006 MUC2Q02817 5179 aa7.03□□□□□ -1.28
CAPN2-201ENST00000295006 TNP1P09430 55 aa6.97□□□□□ -1.29
CAPN2-201ENST00000295006 HERC2O95714 4834 aa6.97□□□□□ -1.29
CAPN2-201ENST00000295006 PP632Q6XCG6 107 aa6.85□□□□□ -1.31
CAPN2-201ENST00000295006 KRTAP10-10P60014 251 aa6.78□□□□□ -1.32
CAPN2-201ENST00000295006 FAT4Q6V0I7 4981 aa6.72□□□□□ -1.33
CAPN2-201ENST00000295006 HERC1Q15751 4861 aa6.66□□□□□ -1.34
CAPN2-201ENST00000295006 MUC17Q685J3 4493 aa6.66□□□□□ -1.34
CAPN2-201ENST00000295006 RNF213Q63HN8 5207 aa6.61□□□□□ -1.35
CAPN2-201ENST00000295006 KRTAP19-2Q3LHN2 52 aa6.59□□□□□ -1.35
CAPN2-201ENST00000295006 PCLOQ9Y6V0 5065 aa6.47□□□□□ -1.37
CAPN2-201ENST00000295006 LCE3AQ5TA76 89 aa6.46□□□□□ -1.38
CAPN2-201ENST00000295006 FLGP20930 4061 aaPredicted RBP6.44□□□□□ -1.38
CAPN2-201ENST00000295006 BIRC6Q9NR09 4857 aa6.39□□□□□ -1.39
CAPN2-201ENST00000295006 UBR4Q5T4S7 5183 aa6.39□□□□□ -1.39
CAPN2-201ENST00000295006 MT1HP80294 61 aa6.38□□□□□ -1.39
CAPN2-201ENST00000295006 KRTAP19-1Q8IUB9 90 aa6.37□□□□□ -1.39
CAPN2-201ENST00000295006 MT1FP04733 61 aa6.36□□□□□ -1.39
CAPN2-201ENST00000295006 LCE2CQ5TA81 110 aa6.34□□□□□ -1.39
CAPN2-201ENST00000295006 SPRR2GQ9BYE4 73 aa6.32□□□□□ -1.4
CAPN2-201ENST00000295006 MT2AP02795 61 aa6.32□□□□□ -1.4
CAPN2-201ENST00000295006 HMCN2Q8NDA2 5059 aa6.29□□□□□ -1.4
CAPN2-201ENST00000295006 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
CAPN2-201ENST00000295006 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
CAPN2-201ENST00000295006 KRTAP12-3P60328 96 aa6.16□□□□□ -1.42
CAPN2-201ENST00000295006 PRO2289Q9P1D8 64 aa6.13□□□□□ -1.43
CAPN2-201ENST00000295006 KRTAP9-8Q9BYQ0 159 aa6.12□□□□□ -1.43
CAPN2-201ENST00000295006 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
CAPN2-201ENST00000295006 MT1BP07438 61 aa6.02□□□□□ -1.45
CAPN2-201ENST00000295006 MT1XP80297 61 aa6.02□□□□□ -1.45
CAPN2-201ENST00000295006 KRTAP10-5P60370 271 aa6.01□□□□□ -1.45
CAPN2-201ENST00000295006 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
CAPN2-201ENST00000295006 KRTAP8-1Q8IUC2 63 aa5.98□□□□□ -1.45
CAPN2-201ENST00000295006 USH2AO75445 5202 aa5.98□□□□□ -1.45
CAPN2-201ENST00000295006 KRTAP19-8Q3LI54 63 aa5.95□□□□□ -1.46
CAPN2-201ENST00000295006 FSIP2Q5CZC0 6907 aa5.91□□□□□ -1.46
CAPN2-201ENST00000295006 KMT2DO14686 5537 aa5.89□□□□□ -1.47
CAPN2-201ENST00000295006 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
CAPN2-201ENST00000295006 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.47
CAPN2-201ENST00000295006 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
CAPN2-201ENST00000295006 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
CAPN2-201ENST00000295006 LCE2BO14633 110 aa5.72□□□□□ -1.49
CAPN2-201ENST00000295006 INE1O15225 51 aa5.66□□□□□ -1.5
CAPN2-201ENST00000295006 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
CAPN2-201ENST00000295006 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
CAPN2-201ENST00000295006 CRCT1Q9UGL9 99 aa5.61□□□□□ -1.51
CAPN2-201ENST00000295006 OBSCNQ5VST9 7968 aa5.48□□□□□ -1.53
CAPN2-201ENST00000295006 DSTQ03001 7570 aaKnown RBP5.43□□□□□ -1.54
CAPN2-201ENST00000295006 KRTAP9-6A8MVA2 160 aa5.37□□□□□ -1.55
CAPN2-201ENST00000295006 FCGBPQ9Y6R7 5405 aaPredicted RBP5.32□□□□□ -1.56
CAPN2-201ENST00000295006 KRTAP19-7Q3SYF9 63 aa5.31□□□□□ -1.56
CAPN2-201ENST00000295006 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
CAPN2-201ENST00000295006 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
CAPN2-201ENST00000295006 KRTAP4-3Q9BYR4 195 aa5.24□□□□□ -1.57
CAPN2-201ENST00000295006 MT1LQ93083 61 aa5.24□□□□□ -1.57
CAPN2-201ENST00000295006 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms