RNA–Protein interactions for RNA: ENST00000291574.8

TRAPPC10-201, Transcript of trafficking protein particle complex 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC10, Length 6,976 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-201ENST00000291574 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
TRAPPC10-201ENST00000291574 LCE3AQ5TA76 89 aa5.84□□□□□ -1.47
TRAPPC10-201ENST00000291574 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
TRAPPC10-201ENST00000291574 PLECQ15149 4684 aaKnown RBP5.73□□□□□ -1.49
TRAPPC10-201ENST00000291574 DNAH11Q96DT5 4516 aa5.72□□□□□ -1.49
TRAPPC10-201ENST00000291574 DNAH10Q8IVF4 4471 aa5.69□□□□□ -1.5
TRAPPC10-201ENST00000291574 DNAH5Q8TE73 4624 aa5.69□□□□□ -1.5
TRAPPC10-201ENST00000291574 DNHD1Q96M86 4753 aa5.64□□□□□ -1.51
TRAPPC10-201ENST00000291574 FAT1Q14517 4588 aa5.64□□□□□ -1.51
TRAPPC10-201ENST00000291574 DNAH9Q9NYC9 4486 aa5.64□□□□□ -1.51
TRAPPC10-201ENST00000291574 LRP1BQ9NZR2 4599 aa5.59□□□□□ -1.51
TRAPPC10-201ENST00000291574 DNAH1Q9P2D7 4330 aa5.58□□□□□ -1.52
TRAPPC10-201ENST00000291574 DNAH8Q96JB1 4490 aa5.54□□□□□ -1.52
TRAPPC10-201ENST00000291574 KRTAP4-1Q9BYQ7 146 aa5.53□□□□□ -1.52
TRAPPC10-201ENST00000291574 DNAH17Q9UFH2 4485 aa5.51□□□□□ -1.53
TRAPPC10-201ENST00000291574 KRTAP10-5P60370 271 aa5.51□□□□□ -1.53
TRAPPC10-201ENST00000291574 VPS13DQ5THJ4 4388 aa5.5□□□□□ -1.53
TRAPPC10-201ENST00000291574 STARD9Q9P2P6 4700 aa5.49□□□□□ -1.53
TRAPPC10-201ENST00000291574 DYNC1H1Q14204 4646 aaKnown RBP5.44□□□□□ -1.54
TRAPPC10-201ENST00000291574 DNAH2Q9P225 4427 aa5.42□□□□□ -1.54
TRAPPC10-201ENST00000291574 MYCBP2O75592 4640 aa5.41□□□□□ -1.54
TRAPPC10-201ENST00000291574 KIAA1109Q2LD37 5005 aa5.39□□□□□ -1.55
TRAPPC10-201ENST00000291574 KRTAP8-1Q8IUC2 63 aa5.36□□□□□ -1.55
TRAPPC10-201ENST00000291574 RYR1P21817 5038 aa5.35□□□□□ -1.55
TRAPPC10-201ENST00000291574 ALMS1Q8TCU4 4167 aa5.34□□□□□ -1.55
TRAPPC10-201ENST00000291574 SPRR2GQ9BYE4 73 aa5.3□□□□□ -1.56
TRAPPC10-201ENST00000291574 MT2AP02795 61 aa5.3□□□□□ -1.56
TRAPPC10-201ENST00000291574 MT1HP80294 61 aa5.3□□□□□ -1.56
TRAPPC10-201ENST00000291574 SACSQ9NZJ4 4579 aa5.27□□□□□ -1.57
TRAPPC10-201ENST00000291574 PRKDCP78527 4128 aaKnown RBP5.26□□□□□ -1.57
TRAPPC10-201ENST00000291574 ANK2Q01484 3957 aa5.25□□□□□ -1.57
TRAPPC10-201ENST00000291574 MT1FP04733 61 aa5.22□□□□□ -1.57
TRAPPC10-201ENST00000291574 APOBP04114 4563 aaKnown RBP5.2□□□□□ -1.58
TRAPPC10-201ENST00000291574 LYSTQ99698 3801 aa5.2□□□□□ -1.58
TRAPPC10-201ENST00000291574 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
TRAPPC10-201ENST00000291574 KMT2AQ03164 3969 aa5.17□□□□□ -1.58
TRAPPC10-201ENST00000291574 LRP1Q07954 4544 aaKnown RBP5.13□□□□□ -1.59
TRAPPC10-201ENST00000291574 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
TRAPPC10-201ENST00000291574 DNAH3Q8TD57 4116 aa5.12□□□□□ -1.59
TRAPPC10-201ENST00000291574 VPS13BQ7Z7G8 4022 aa5.12□□□□□ -1.59
TRAPPC10-201ENST00000291574 DYNC2H1Q8NCM8 4307 aaKnown RBP5.12□□□□□ -1.59
TRAPPC10-201ENST00000291574 RYR3Q15413 4870 aa5.08□□□□□ -1.6
TRAPPC10-201ENST00000291574 FAT3Q8TDW7 4589 aa5.07□□□□□ -1.6
TRAPPC10-201ENST00000291574 FAT2Q9NYQ8 4349 aa5.07□□□□□ -1.6
TRAPPC10-201ENST00000291574 HYDINQ4G0P3 5121 aa5.05□□□□□ -1.6
TRAPPC10-201ENST00000291574 DNAH6Q9C0G6 4158 aa5.04□□□□□ -1.6
TRAPPC10-201ENST00000291574 CMYA5Q8N3K9 4069 aa5.02□□□□□ -1.61
TRAPPC10-201ENST00000291574 FRAS1Q86XX4 4008 aa5.02□□□□□ -1.61
TRAPPC10-201ENST00000291574 KRTAP19-1Q8IUB9 90 aa5.01□□□□□ -1.61
TRAPPC10-201ENST00000291574 KRTAP10-7P60409 375 aaPredicted RBP5□□□□□ -1.61
TRAPPC10-201ENST00000291574 HECTD4Q9Y4D8 3996 aa5□□□□□ -1.61
TRAPPC10-201ENST00000291574 LRP2P98164 4655 aa4.99□□□□□ -1.61
TRAPPC10-201ENST00000291574 DNAH7Q8WXX0 4024 aa4.98□□□□□ -1.61
TRAPPC10-201ENST00000291574 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
TRAPPC10-201ENST00000291574 RYR2Q92736 4967 aa4.95□□□□□ -1.62
TRAPPC10-201ENST00000291574 KRTAP17-1Q9BYP8 105 aa4.94□□□□□ -1.62
TRAPPC10-201ENST00000291574 KRTAP19-8Q3LI54 63 aa4.89□□□□□ -1.63
TRAPPC10-201ENST00000291574 MT1XP80297 61 aa4.86□□□□□ -1.63
TRAPPC10-201ENST00000291574 KMT2CQ8NEZ4 4911 aaKnown RBP4.83□□□□□ -1.64
TRAPPC10-201ENST00000291574 PKHD1P08F94 4074 aa4.83□□□□□ -1.64
TRAPPC10-201ENST00000291574 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
TRAPPC10-201ENST00000291574 HERC2O95714 4834 aa4.81□□□□□ -1.64
TRAPPC10-201ENST00000291574 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
TRAPPC10-201ENST00000291574 MT1BP07438 61 aa4.79□□□□□ -1.64
TRAPPC10-201ENST00000291574 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
TRAPPC10-201ENST00000291574 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
TRAPPC10-201ENST00000291574 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
TRAPPC10-201ENST00000291574 KRTAP4-8Q9BYQ9 185 aa4.76□□□□□ -1.65
TRAPPC10-201ENST00000291574 MT1GP13640 62 aa4.73□□□□□ -1.65
TRAPPC10-201ENST00000291574 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.66
TRAPPC10-201ENST00000291574 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
TRAPPC10-201ENST00000291574 HSPG2P98160 4391 aa4.67□□□□□ -1.66
TRAPPC10-201ENST00000291574 PKD1P98161 4303 aa4.66□□□□□ -1.66
TRAPPC10-201ENST00000291574 LCE2CQ5TA81 110 aa4.62□□□□□ -1.67
TRAPPC10-201ENST00000291574 EPPK1P58107 5090 aaKnown RBP4.62□□□□□ -1.67
TRAPPC10-201ENST00000291574 ABCA13Q86UQ4 5058 aa4.6□□□□□ -1.67
TRAPPC10-201ENST00000291574 PCLOQ9Y6V0 5065 aa4.59□□□□□ -1.67
TRAPPC10-201ENST00000291574 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
TRAPPC10-201ENST00000291574 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
TRAPPC10-201ENST00000291574 MUC17Q685J3 4493 aa4.56□□□□□ -1.68
TRAPPC10-201ENST00000291574 LPAP08519 4548 aa4.54□□□□□ -1.68
TRAPPC10-201ENST00000291574 SPRR2EP22531 72 aa4.54□□□□□ -1.68
TRAPPC10-201ENST00000291574 SPRR2BP35325 72 aa4.54□□□□□ -1.68
TRAPPC10-201ENST00000291574 SPRR2AP35326 72 aa4.54□□□□□ -1.68
TRAPPC10-201ENST00000291574 KRTAP19-2Q3LHN2 52 aa4.53□□□□□ -1.68
TRAPPC10-201ENST00000291574 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
TRAPPC10-201ENST00000291574 HERC1Q15751 4861 aa4.51□□□□□ -1.69
TRAPPC10-201ENST00000291574 BIRC6Q9NR09 4857 aa4.48□□□□□ -1.69
TRAPPC10-201ENST00000291574 UBR4Q5T4S7 5183 aa4.47□□□□□ -1.69
TRAPPC10-201ENST00000291574 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
TRAPPC10-201ENST00000291574 RNF213Q63HN8 5207 aa4.44□□□□□ -1.7
TRAPPC10-201ENST00000291574 PKHD1L1Q86WI1 4243 aa4.43□□□□□ -1.7
TRAPPC10-201ENST00000291574 MT1LQ93083 61 aa4.41□□□□□ -1.7
TRAPPC10-201ENST00000291574 LCE2BO14633 110 aa4.41□□□□□ -1.7
TRAPPC10-201ENST00000291574 MUC2Q02817 5179 aa4.39□□□□□ -1.71
TRAPPC10-201ENST00000291574 FAT4Q6V0I7 4981 aa4.37□□□□□ -1.71
TRAPPC10-201ENST00000291574 SPRR2DP22532 72 aa4.37□□□□□ -1.71
TRAPPC10-201ENST00000291574 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
TRAPPC10-201ENST00000291574 TNXBP22105 4242 aa4.36□□□□□ -1.71
TRAPPC10-201ENST00000291574 MT1EP04732 61 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms