RNA–Protein interactions for RNA: ENST00000282701.2

BMP3-201, Transcript of bone morphogenetic protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BMP3, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3-201ENST00000282701 KRTAP10-5P60370 271 aa6.83□□□□□ -1.32
BMP3-201ENST00000282701 ALMS1Q8TCU4 4167 aa6.82□□□□□ -1.32
BMP3-201ENST00000282701 AKAP9Q99996 3911 aa6.82□□□□□ -1.32
BMP3-201ENST00000282701 DNAH9Q9NYC9 4486 aa6.77□□□□□ -1.32
BMP3-201ENST00000282701 ZNF469Q96JG9 3925 aaPredicted RBP6.75□□□□□ -1.33
BMP3-201ENST00000282701 KRTAP8-1Q8IUC2 63 aa6.71□□□□□ -1.33
BMP3-201ENST00000282701 CSMD3Q7Z407 3707 aa6.68□□□□□ -1.34
BMP3-201ENST00000282701 DNAH1Q9P2D7 4330 aa6.67□□□□□ -1.34
BMP3-201ENST00000282701 PLECQ15149 4684 aaKnown RBP6.59□□□□□ -1.35
BMP3-201ENST00000282701 DNAH5Q8TE73 4624 aa6.57□□□□□ -1.36
BMP3-201ENST00000282701 DNAH17Q9UFH2 4485 aa6.53□□□□□ -1.36
BMP3-201ENST00000282701 DNAH10Q8IVF4 4471 aa6.51□□□□□ -1.37
BMP3-201ENST00000282701 VPS13DQ5THJ4 4388 aa6.5□□□□□ -1.37
BMP3-201ENST00000282701 DNAH11Q96DT5 4516 aa6.48□□□□□ -1.37
BMP3-201ENST00000282701 KRTAP4-1Q9BYQ7 146 aa6.44□□□□□ -1.38
BMP3-201ENST00000282701 MT1HP80294 61 aa6.41□□□□□ -1.38
BMP3-201ENST00000282701 DNAH3Q8TD57 4116 aa6.4□□□□□ -1.38
BMP3-201ENST00000282701 DNAH2Q9P225 4427 aa6.4□□□□□ -1.38
BMP3-201ENST00000282701 SPRR2GQ9BYE4 73 aa6.39□□□□□ -1.39
BMP3-201ENST00000282701 MT2AP02795 61 aa6.35□□□□□ -1.39
BMP3-201ENST00000282701 STARD9Q9P2P6 4700 aa6.31□□□□□ -1.4
BMP3-201ENST00000282701 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
BMP3-201ENST00000282701 DNHD1Q96M86 4753 aa6.3□□□□□ -1.4
BMP3-201ENST00000282701 DNAH8Q96JB1 4490 aa6.3□□□□□ -1.4
BMP3-201ENST00000282701 LCE3CQ5T5A8 94 aa6.28□□□□□ -1.4
BMP3-201ENST00000282701 DYNC1H1Q14204 4646 aaKnown RBP6.28□□□□□ -1.4
BMP3-201ENST00000282701 LRP1BQ9NZR2 4599 aa6.26□□□□□ -1.41
BMP3-201ENST00000282701 DYNC2H1Q8NCM8 4307 aaKnown RBP6.24□□□□□ -1.41
BMP3-201ENST00000282701 KRTAP10-7P60409 375 aaPredicted RBP6.23□□□□□ -1.41
BMP3-201ENST00000282701 SACSQ9NZJ4 4579 aa6.23□□□□□ -1.41
BMP3-201ENST00000282701 MT1FP04733 61 aa6.21□□□□□ -1.42
BMP3-201ENST00000282701 ANK2Q01484 3957 aa6.18□□□□□ -1.42
BMP3-201ENST00000282701 FAT2Q9NYQ8 4349 aa6.18□□□□□ -1.42
BMP3-201ENST00000282701 SPRR2FQ96RM1 72 aa6.17□□□□□ -1.42
BMP3-201ENST00000282701 FAT1Q14517 4588 aa6.17□□□□□ -1.42
BMP3-201ENST00000282701 RYR1P21817 5038 aa6.1□□□□□ -1.43
BMP3-201ENST00000282701 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
BMP3-201ENST00000282701 KMT2AQ03164 3969 aa6.08□□□□□ -1.44
BMP3-201ENST00000282701 PRKDCP78527 4128 aaKnown RBP6.06□□□□□ -1.44
BMP3-201ENST00000282701 VPS13BQ7Z7G8 4022 aa6.04□□□□□ -1.44
BMP3-201ENST00000282701 CMYA5Q8N3K9 4069 aa6.01□□□□□ -1.45
BMP3-201ENST00000282701 APOBP04114 4563 aaKnown RBP5.99□□□□□ -1.45
BMP3-201ENST00000282701 DNAH6Q9C0G6 4158 aa5.98□□□□□ -1.45
BMP3-201ENST00000282701 FRAS1Q86XX4 4008 aa5.97□□□□□ -1.45
BMP3-201ENST00000282701 DNAH7Q8WXX0 4024 aa5.89□□□□□ -1.47
BMP3-201ENST00000282701 HECTD4Q9Y4D8 3996 aa5.88□□□□□ -1.47
BMP3-201ENST00000282701 KRTAP19-8Q3LI54 63 aa5.86□□□□□ -1.47
BMP3-201ENST00000282701 LCE3BQ5TA77 95 aa5.86□□□□□ -1.47
BMP3-201ENST00000282701 LYSTQ99698 3801 aa5.85□□□□□ -1.47
BMP3-201ENST00000282701 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
BMP3-201ENST00000282701 RYR3Q15413 4870 aa5.79□□□□□ -1.48
BMP3-201ENST00000282701 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
BMP3-201ENST00000282701 KRTAP17-1Q9BYP8 105 aa5.79□□□□□ -1.48
BMP3-201ENST00000282701 SPRR2EP22531 72 aa5.77□□□□□ -1.49
BMP3-201ENST00000282701 SPRR2BP35325 72 aa5.77□□□□□ -1.49
BMP3-201ENST00000282701 SPRR2AP35326 72 aa5.77□□□□□ -1.49
BMP3-201ENST00000282701 MT1XP80297 61 aa5.76□□□□□ -1.49
BMP3-201ENST00000282701 FAT3Q8TDW7 4589 aa5.75□□□□□ -1.49
BMP3-201ENST00000282701 MYCBP2O75592 4640 aa5.75□□□□□ -1.49
BMP3-201ENST00000282701 MT1GP13640 62 aa5.74□□□□□ -1.49
BMP3-201ENST00000282701 KIAA1109Q2LD37 5005 aa5.72□□□□□ -1.49
BMP3-201ENST00000282701 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
BMP3-201ENST00000282701 LRP1Q07954 4544 aaKnown RBP5.67□□□□□ -1.5
BMP3-201ENST00000282701 RYR2Q92736 4967 aa5.66□□□□□ -1.5
BMP3-201ENST00000282701 MT1BP07438 61 aa5.63□□□□□ -1.51
BMP3-201ENST00000282701 SPRR2DP22532 72 aa5.59□□□□□ -1.51
BMP3-201ENST00000282701 LCE2BO14633 110 aa5.57□□□□□ -1.52
BMP3-201ENST00000282701 LCE3DQ9BYE3 92 aa5.57□□□□□ -1.52
BMP3-201ENST00000282701 HYDINQ4G0P3 5121 aa5.55□□□□□ -1.52
BMP3-201ENST00000282701 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
BMP3-201ENST00000282701 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
BMP3-201ENST00000282701 KRTAP9-8Q9BYQ0 159 aa5.51□□□□□ -1.53
BMP3-201ENST00000282701 LCE3EQ5T5B0 92 aa5.49□□□□□ -1.53
BMP3-201ENST00000282701 HSPG2P98160 4391 aa5.49□□□□□ -1.53
BMP3-201ENST00000282701 HERC2O95714 4834 aa5.45□□□□□ -1.54
BMP3-201ENST00000282701 HERC1Q15751 4861 aa5.43□□□□□ -1.54
BMP3-201ENST00000282701 PKHD1P08F94 4074 aa5.41□□□□□ -1.54
BMP3-201ENST00000282701 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.54
BMP3-201ENST00000282701 PKD1P98161 4303 aa5.39□□□□□ -1.55
BMP3-201ENST00000282701 BIRC6Q9NR09 4857 aa5.39□□□□□ -1.55
BMP3-201ENST00000282701 LRP2P98164 4655 aa5.39□□□□□ -1.55
BMP3-201ENST00000282701 LCE2CQ5TA81 110 aa5.38□□□□□ -1.55
BMP3-201ENST00000282701 PKHD1L1Q86WI1 4243 aa5.37□□□□□ -1.55
BMP3-201ENST00000282701 PCLOQ9Y6V0 5065 aa5.35□□□□□ -1.55
BMP3-201ENST00000282701 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
BMP3-201ENST00000282701 TNXBP22105 4242 aa5.3□□□□□ -1.56
BMP3-201ENST00000282701 LPAP08519 4548 aa5.3□□□□□ -1.56
BMP3-201ENST00000282701 MT1LQ93083 61 aa5.28□□□□□ -1.56
BMP3-201ENST00000282701 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
BMP3-201ENST00000282701 KMT2CQ8NEZ4 4911 aaKnown RBP5.22□□□□□ -1.57
BMP3-201ENST00000282701 MT1EP04732 61 aa5.21□□□□□ -1.58
BMP3-201ENST00000282701 KRTAP19-2Q3LHN2 52 aa5.21□□□□□ -1.58
BMP3-201ENST00000282701 PRM1P04553 51 aa5.13□□□□□ -1.59
BMP3-201ENST00000282701 EPPK1P58107 5090 aaKnown RBP5.11□□□□□ -1.59
BMP3-201ENST00000282701 LCE2DQ5TA82 110 aaPredicted RBP5.11□□□□□ -1.59
BMP3-201ENST00000282701 MT3P25713 68 aa5.08□□□□□ -1.6
BMP3-201ENST00000282701 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
BMP3-201ENST00000282701 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
BMP3-201ENST00000282701 MT1MQ8N339 61 aa5.06□□□□□ -1.6
BMP3-201ENST00000282701 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms