RNA–Protein interactions for RNA: ENST00000280527.6

CRIM1-201, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIM1, Length 5,912 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-201ENST00000280527 CSMD3Q7Z407 3707 aa9.5□□□□□ -0.89
CRIM1-201ENST00000280527 KRTAP10-4P60372 401 aaPredicted RBP9.44□□□□□ -0.9
CRIM1-201ENST00000280527 ALMS1Q8TCU4 4167 aa9.33□□□□□ -0.92
CRIM1-201ENST00000280527 KRTAP8-1Q8IUC2 63 aa9.27□□□□□ -0.93
CRIM1-201ENST00000280527 ZNF469Q96JG9 3925 aaPredicted RBP9.26□□□□□ -0.93
CRIM1-201ENST00000280527 AKAP9Q99996 3911 aa9.23□□□□□ -0.93
CRIM1-201ENST00000280527 DNAH9Q9NYC9 4486 aa9.2□□□□□ -0.94
CRIM1-201ENST00000280527 DNAH1Q9P2D7 4330 aa9.04□□□□□ -0.96
CRIM1-201ENST00000280527 DNAH5Q8TE73 4624 aa9.01□□□□□ -0.97
CRIM1-201ENST00000280527 PLECQ15149 4684 aaKnown RBP8.93□□□□□ -0.98
CRIM1-201ENST00000280527 DNAH10Q8IVF4 4471 aa8.87□□□□□ -0.99
CRIM1-201ENST00000280527 KRTAP4-1Q9BYQ7 146 aa8.81□□□□□ -1
CRIM1-201ENST00000280527 DNAH11Q96DT5 4516 aa8.81□□□□□ -1
CRIM1-201ENST00000280527 MT1HP80294 61 aa8.77□□□□□ -1.01
CRIM1-201ENST00000280527 DNAH2Q9P225 4427 aa8.67□□□□□ -1.02
CRIM1-201ENST00000280527 DNAH17Q9UFH2 4485 aa8.65□□□□□ -1.02
CRIM1-201ENST00000280527 VPS13DQ5THJ4 4388 aa8.64□□□□□ -1.03
CRIM1-201ENST00000280527 MT2AP02795 61 aa8.64□□□□□ -1.03
CRIM1-201ENST00000280527 KRTAP19-5Q3LI72 72 aa8.64□□□□□ -1.03
CRIM1-201ENST00000280527 SPRR2FQ96RM1 72 aa8.64□□□□□ -1.03
CRIM1-201ENST00000280527 DNHD1Q96M86 4753 aa8.58□□□□□ -1.04
CRIM1-201ENST00000280527 LCE3CQ5T5A8 94 aa8.58□□□□□ -1.04
CRIM1-201ENST00000280527 KRTAP10-7P60409 375 aaPredicted RBP8.57□□□□□ -1.04
CRIM1-201ENST00000280527 STARD9Q9P2P6 4700 aa8.56□□□□□ -1.04
CRIM1-201ENST00000280527 LRP1BQ9NZR2 4599 aa8.55□□□□□ -1.04
CRIM1-201ENST00000280527 DNAH3Q8TD57 4116 aa8.54□□□□□ -1.04
CRIM1-201ENST00000280527 DYNC1H1Q14204 4646 aaKnown RBP8.53□□□□□ -1.04
CRIM1-201ENST00000280527 SPRR2GQ9BYE4 73 aa8.51□□□□□ -1.05
CRIM1-201ENST00000280527 FAT1Q14517 4588 aa8.5□□□□□ -1.05
CRIM1-201ENST00000280527 ANK2Q01484 3957 aa8.48□□□□□ -1.05
CRIM1-201ENST00000280527 MT1FP04733 61 aa8.47□□□□□ -1.05
CRIM1-201ENST00000280527 DNAH8Q96JB1 4490 aa8.45□□□□□ -1.06
CRIM1-201ENST00000280527 FAT2Q9NYQ8 4349 aa8.44□□□□□ -1.06
CRIM1-201ENST00000280527 KMT2AQ03164 3969 aa8.39□□□□□ -1.07
CRIM1-201ENST00000280527 DYNC2H1Q8NCM8 4307 aaKnown RBP8.35□□□□□ -1.07
CRIM1-201ENST00000280527 SACSQ9NZJ4 4579 aa8.34□□□□□ -1.07
CRIM1-201ENST00000280527 PRKDCP78527 4128 aaKnown RBP8.31□□□□□ -1.08
CRIM1-201ENST00000280527 RYR1P21817 5038 aa8.3□□□□□ -1.08
CRIM1-201ENST00000280527 VPS13BQ7Z7G8 4022 aa8.29□□□□□ -1.08
CRIM1-201ENST00000280527 FRAS1Q86XX4 4008 aa8.23□□□□□ -1.09
CRIM1-201ENST00000280527 LYSTQ99698 3801 aa8.19□□□□□ -1.1
CRIM1-201ENST00000280527 APOBP04114 4563 aaKnown RBP8.16□□□□□ -1.1
CRIM1-201ENST00000280527 LCE3BQ5TA77 95 aa8.16□□□□□ -1.1
CRIM1-201ENST00000280527 CMYA5Q8N3K9 4069 aa8.11□□□□□ -1.11
CRIM1-201ENST00000280527 SPRR2EP22531 72 aa8.1□□□□□ -1.11
CRIM1-201ENST00000280527 SPRR2BP35325 72 aa8.1□□□□□ -1.11
CRIM1-201ENST00000280527 SPRR2AP35326 72 aa8.1□□□□□ -1.11
CRIM1-201ENST00000280527 KRTAP12-4P60329 112 aa8.1□□□□□ -1.11
CRIM1-201ENST00000280527 KRTAP17-1Q9BYP8 105 aa8.02□□□□□ -1.13
CRIM1-201ENST00000280527 DNAH7Q8WXX0 4024 aa7.97□□□□□ -1.13
CRIM1-201ENST00000280527 MT1GP13640 62 aa7.93□□□□□ -1.14
CRIM1-201ENST00000280527 DNAH6Q9C0G6 4158 aa7.93□□□□□ -1.14
CRIM1-201ENST00000280527 MYCBP2O75592 4640 aa7.92□□□□□ -1.14
CRIM1-201ENST00000280527 RYR3Q15413 4870 aa7.92□□□□□ -1.14
CRIM1-201ENST00000280527 KRTAP19-4Q3LI73 84 aa7.91□□□□□ -1.14
CRIM1-201ENST00000280527 SPRR2DP22532 72 aa7.82□□□□□ -1.16
CRIM1-201ENST00000280527 HECTD4Q9Y4D8 3996 aa7.82□□□□□ -1.16
CRIM1-201ENST00000280527 KRTAP19-1Q8IUB9 90 aa7.82□□□□□ -1.16
CRIM1-201ENST00000280527 FAT3Q8TDW7 4589 aa7.79□□□□□ -1.16
CRIM1-201ENST00000280527 LRP1Q07954 4544 aaKnown RBP7.78□□□□□ -1.16
CRIM1-201ENST00000280527 MT1XP80297 61 aa7.77□□□□□ -1.16
CRIM1-201ENST00000280527 KRTAP19-8Q3LI54 63 aa7.75□□□□□ -1.17
CRIM1-201ENST00000280527 SPRR5A0A1B0GTR4 108 aa7.74□□□□□ -1.17
CRIM1-201ENST00000280527 LCE2BO14633 110 aa7.73□□□□□ -1.17
CRIM1-201ENST00000280527 KRTAP4-8A0A0G2JLE6 195 aa7.67□□□□□ -1.18
CRIM1-201ENST00000280527 KRTAP4-8Q9BYQ9 185 aa7.67□□□□□ -1.18
CRIM1-201ENST00000280527 LCE3DQ9BYE3 92 aa7.66□□□□□ -1.18
CRIM1-201ENST00000280527 KIAA1109Q2LD37 5005 aa7.62□□□□□ -1.19
CRIM1-201ENST00000280527 MT1BP07438 61 aa7.57□□□□□ -1.2
CRIM1-201ENST00000280527 LCE3EQ5T5B0 92 aa7.54□□□□□ -1.2
CRIM1-201ENST00000280527 HSPG2P98160 4391 aa7.53□□□□□ -1.2
CRIM1-201ENST00000280527 HYDINQ4G0P3 5121 aa7.52□□□□□ -1.21
CRIM1-201ENST00000280527 RYR2Q92736 4967 aa7.49□□□□□ -1.21
CRIM1-201ENST00000280527 LPAP08519 4548 aa7.48□□□□□ -1.21
CRIM1-201ENST00000280527 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
CRIM1-201ENST00000280527 KRTAP4-7Q9BYR0 210 aa7.39□□□□□ -1.23
CRIM1-201ENST00000280527 PKHD1P08F94 4074 aa7.39□□□□□ -1.23
CRIM1-201ENST00000280527 LRP2P98164 4655 aa7.35□□□□□ -1.23
CRIM1-201ENST00000280527 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
CRIM1-201ENST00000280527 KRTAP9-3Q9BYQ3 159 aa7.31□□□□□ -1.24
CRIM1-201ENST00000280527 HERC2O95714 4834 aa7.29□□□□□ -1.24
CRIM1-201ENST00000280527 PKD1P98161 4303 aa7.27□□□□□ -1.25
CRIM1-201ENST00000280527 PRM1P04553 51 aa7.21□□□□□ -1.25
CRIM1-201ENST00000280527 PKHD1L1Q86WI1 4243 aa7.21□□□□□ -1.26
CRIM1-201ENST00000280527 LCE2DQ5TA82 110 aaPredicted RBP7.19□□□□□ -1.26
CRIM1-201ENST00000280527 KRTAP19-3Q7Z4W3 81 aa7.18□□□□□ -1.26
CRIM1-201ENST00000280527 MT1LQ93083 61 aa7.13□□□□□ -1.27
CRIM1-201ENST00000280527 TNXBP22105 4242 aa7.12□□□□□ -1.27
CRIM1-201ENST00000280527 HERC1Q15751 4861 aa7.12□□□□□ -1.27
CRIM1-201ENST00000280527 BIRC6Q9NR09 4857 aa7.1□□□□□ -1.27
CRIM1-201ENST00000280527 MT4P47944 62 aa7.06□□□□□ -1.28
CRIM1-201ENST00000280527 PCLOQ9Y6V0 5065 aa7.06□□□□□ -1.28
CRIM1-201ENST00000280527 KMT2CQ8NEZ4 4911 aaKnown RBP7.05□□□□□ -1.28
CRIM1-201ENST00000280527 MT1EP04732 61 aa7□□□□□ -1.29
CRIM1-201ENST00000280527 LOC100996750A0A140TA64 210 aa6.98□□□□□ -1.29
CRIM1-201ENST00000280527 KRTAP19-2Q3LHN2 52 aa6.91□□□□□ -1.3
CRIM1-201ENST00000280527 LCE1BQ5T7P3 118 aa6.87□□□□□ -1.31
CRIM1-201ENST00000280527 MT3P25713 68 aa6.85□□□□□ -1.31
CRIM1-201ENST00000280527 MT1MQ8N339 61 aa6.83□□□□□ -1.32
CRIM1-201ENST00000280527 KRTAP4-3Q9BYR4 195 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms