RNA–Protein interactions for RNA: ENST00000273582.9

RUBCN-201, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RUBCN, Length 6,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-201ENST00000273582 ZNF469Q96JG9 3925 aaPredicted RBP4.98□□□□□ -1.61
RUBCN-201ENST00000273582 DNAH2Q9P225 4427 aa4.98□□□□□ -1.61
RUBCN-201ENST00000273582 STARD9Q9P2P6 4700 aa4.97□□□□□ -1.61
RUBCN-201ENST00000273582 CRCT1Q9UGL9 99 aa4.97□□□□□ -1.61
RUBCN-201ENST00000273582 HUWE1Q7Z6Z7 4374 aaKnown RBP4.96□□□□□ -1.61
RUBCN-201ENST00000273582 MT1HL1P0DM35 61 aa4.95□□□□□ -1.62
RUBCN-201ENST00000273582 KRTAP3-3Q9BYR6 98 aa4.95□□□□□ -1.62
RUBCN-201ENST00000273582 FAT1Q14517 4588 aa4.95□□□□□ -1.62
RUBCN-201ENST00000273582 SACSQ9NZJ4 4579 aa4.94□□□□□ -1.62
RUBCN-201ENST00000273582 ABCA13Q86UQ4 5058 aa4.93□□□□□ -1.62
RUBCN-201ENST00000273582 VPS13CQ709C8 3753 aa4.89□□□□□ -1.63
RUBCN-201ENST00000273582 HERC2O95714 4834 aa4.89□□□□□ -1.63
RUBCN-201ENST00000273582 AKAP9Q99996 3911 aa4.88□□□□□ -1.63
RUBCN-201ENST00000273582 BIRC6Q9NR09 4857 aa4.86□□□□□ -1.63
RUBCN-201ENST00000273582 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
RUBCN-201ENST00000273582 APOBP04114 4563 aaKnown RBP4.84□□□□□ -1.63
RUBCN-201ENST00000273582 DNAH3Q8TD57 4116 aa4.81□□□□□ -1.64
RUBCN-201ENST00000273582 KMT2CQ8NEZ4 4911 aaKnown RBP4.8□□□□□ -1.64
RUBCN-201ENST00000273582 KRTAP13-4Q3LI77 160 aa4.79□□□□□ -1.64
RUBCN-201ENST00000273582 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
RUBCN-201ENST00000273582 PCLOQ9Y6V0 5065 aa4.76□□□□□ -1.65
RUBCN-201ENST00000273582 ANK2Q01484 3957 aa4.76□□□□□ -1.65
RUBCN-201ENST00000273582 DYNC2H1Q8NCM8 4307 aaKnown RBP4.75□□□□□ -1.65
RUBCN-201ENST00000273582 MYCBP2O75592 4640 aa4.75□□□□□ -1.65
RUBCN-201ENST00000273582 UBR4Q5T4S7 5183 aa4.75□□□□□ -1.65
RUBCN-201ENST00000273582 EPPK1P58107 5090 aaKnown RBP4.72□□□□□ -1.65
RUBCN-201ENST00000273582 KRTAP12-2P59991 146 aa4.71□□□□□ -1.66
RUBCN-201ENST00000273582 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
RUBCN-201ENST00000273582 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
RUBCN-201ENST00000273582 RNF213Q63HN8 5207 aa4.68□□□□□ -1.66
RUBCN-201ENST00000273582 HERC1Q15751 4861 aa4.68□□□□□ -1.66
RUBCN-201ENST00000273582 PRKDCP78527 4128 aaKnown RBP4.65□□□□□ -1.66
RUBCN-201ENST00000273582 HMCN2Q8NDA2 5059 aa4.65□□□□□ -1.67
RUBCN-201ENST00000273582 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
RUBCN-201ENST00000273582 CSMD3Q7Z407 3707 aa4.61□□□□□ -1.67
RUBCN-201ENST00000273582 ALMS1Q8TCU4 4167 aa4.59□□□□□ -1.67
RUBCN-201ENST00000273582 FAT3Q8TDW7 4589 aa4.56□□□□□ -1.68
RUBCN-201ENST00000273582 MUC17Q685J3 4493 aa4.53□□□□□ -1.68
RUBCN-201ENST00000273582 LRP1Q07954 4544 aaKnown RBP4.53□□□□□ -1.68
RUBCN-201ENST00000273582 LRP2P98164 4655 aa4.5□□□□□ -1.69
RUBCN-201ENST00000273582 HSPG2P98160 4391 aa4.47□□□□□ -1.69
RUBCN-201ENST00000273582 KRTAP19-2Q3LHN2 52 aa4.46□□□□□ -1.7
RUBCN-201ENST00000273582 INE1O15225 51 aa4.39□□□□□ -1.71
RUBCN-201ENST00000273582 KRTAP17-1Q9BYP8 105 aa4.38□□□□□ -1.71
RUBCN-201ENST00000273582 DNAH6Q9C0G6 4158 aa4.36□□□□□ -1.71
RUBCN-201ENST00000273582 LORP23490 312 aaPredicted RBP4.36□□□□□ -1.71
RUBCN-201ENST00000273582 FAT2Q9NYQ8 4349 aa4.34□□□□□ -1.71
RUBCN-201ENST00000273582 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.72
RUBCN-201ENST00000273582 KRTAP10-5P60370 271 aa4.34□□□□□ -1.72
RUBCN-201ENST00000273582 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
RUBCN-201ENST00000273582 KRTAP8-1Q8IUC2 63 aa4.31□□□□□ -1.72
RUBCN-201ENST00000273582 KRTAP4-1Q9BYQ7 146 aa4.31□□□□□ -1.72
RUBCN-201ENST00000273582 PKD1P98161 4303 aa4.29□□□□□ -1.72
RUBCN-201ENST00000273582 HECTD4Q9Y4D8 3996 aa4.28□□□□□ -1.72
RUBCN-201ENST00000273582 DNAH7Q8WXX0 4024 aa4.27□□□□□ -1.73
RUBCN-201ENST00000273582 KRTAP4-5Q9BYR2 181 aa4.26□□□□□ -1.73
RUBCN-201ENST00000273582 CMYA5Q8N3K9 4069 aa4.26□□□□□ -1.73
RUBCN-201ENST00000273582 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
RUBCN-201ENST00000273582 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
RUBCN-201ENST00000273582 FAT4Q6V0I7 4981 aa4.23□□□□□ -1.73
RUBCN-201ENST00000273582 KRTAP19-1Q8IUB9 90 aa4.22□□□□□ -1.73
RUBCN-201ENST00000273582 PKHD1P08F94 4074 aa4.2□□□□□ -1.74
RUBCN-201ENST00000273582 LYSTQ99698 3801 aa4.17□□□□□ -1.74
RUBCN-201ENST00000273582 VPS13BQ7Z7G8 4022 aa4.17□□□□□ -1.74
RUBCN-201ENST00000273582 LCE2CQ5TA81 110 aa4.17□□□□□ -1.74
RUBCN-201ENST00000273582 KMT2AQ03164 3969 aa4.14□□□□□ -1.75
RUBCN-201ENST00000273582 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
RUBCN-201ENST00000273582 USH2AO75445 5202 aa4.1□□□□□ -1.75
RUBCN-201ENST00000273582 MT2AP02795 61 aa4.08□□□□□ -1.76
RUBCN-201ENST00000273582 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
RUBCN-201ENST00000273582 PKHD1L1Q86WI1 4243 aa4.05□□□□□ -1.76
RUBCN-201ENST00000273582 FRAS1Q86XX4 4008 aa4.04□□□□□ -1.76
RUBCN-201ENST00000273582 LCE3AQ5TA76 89 aa4.03□□□□□ -1.76
RUBCN-201ENST00000273582 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
RUBCN-201ENST00000273582 MUC2Q02817 5179 aa3.99□□□□□ -1.77
RUBCN-201ENST00000273582 MT1HP80294 61 aa3.98□□□□□ -1.77
RUBCN-201ENST00000273582 MT1FP04733 61 aa3.96□□□□□ -1.77
RUBCN-201ENST00000273582 KRTAP9-8Q9BYQ0 159 aa3.96□□□□□ -1.78
RUBCN-201ENST00000273582 MT1BP07438 61 aa3.94□□□□□ -1.78
RUBCN-201ENST00000273582 FLGP20930 4061 aaPredicted RBP3.91□□□□□ -1.78
RUBCN-201ENST00000273582 SSPOA2VEC9 5147 aa3.9□□□□□ -1.79
RUBCN-201ENST00000273582 MT1XP80297 61 aa3.85□□□□□ -1.79
RUBCN-201ENST00000273582 KRTAP9-3Q9BYQ3 159 aa3.84□□□□□ -1.79
RUBCN-201ENST00000273582 TNXBP22105 4242 aa3.84□□□□□ -1.8
RUBCN-201ENST00000273582 SPRR2FQ96RM1 72 aa3.79□□□□□ -1.8
RUBCN-201ENST00000273582 LCE2AQ5TA79 106 aaPredicted RBP3.71□□□□□ -1.82
RUBCN-201ENST00000273582 SPRR2EP22531 72 aa3.7□□□□□ -1.82
RUBCN-201ENST00000273582 SPRR2BP35325 72 aa3.7□□□□□ -1.82
RUBCN-201ENST00000273582 SPRR2AP35326 72 aa3.7□□□□□ -1.82
RUBCN-201ENST00000273582 KMT2DO14686 5537 aa3.63□□□□□ -1.83
RUBCN-201ENST00000273582 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
RUBCN-201ENST00000273582 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
RUBCN-201ENST00000273582 SPRR2DP22532 72 aa3.59□□□□□ -1.84
RUBCN-201ENST00000273582 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.84
RUBCN-201ENST00000273582 LCE2BO14633 110 aa3.58□□□□□ -1.84
RUBCN-201ENST00000273582 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
RUBCN-201ENST00000273582 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
RUBCN-201ENST00000273582 FCGBPQ9Y6R7 5405 aaPredicted RBP3.51□□□□□ -1.85
RUBCN-201ENST00000273582 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
RUBCN-201ENST00000273582 LCE3BQ5TA77 95 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms