RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 J3QL48 77 aa7.81□□□□□ -1.16
TNFRSF11A-201ENST00000269485 RYR2Q92736 4967 aa7.8□□□□□ -1.16
TNFRSF11A-201ENST00000269485 P0C880 135 aa7.78□□□□□ -1.16
TNFRSF11A-201ENST00000269485 KRTAP16-1A8MUX0 517 aa7.72□□□□□ -1.17
TNFRSF11A-201ENST00000269485 H0YAA0 97 aa7.71□□□□□ -1.18
TNFRSF11A-201ENST00000269485 C10orf95Q9H7T3 257 aa7.67□□□□□ -1.18
TNFRSF11A-201ENST00000269485 KRTAP13-3Q3SY46 172 aa7.66□□□□□ -1.18
TNFRSF11A-201ENST00000269485 KRTAP4-5Q9BYR2 181 aa7.66□□□□□ -1.18
TNFRSF11A-201ENST00000269485 EPPK1P58107 5090 aaKnown RBP7.65□□□□□ -1.18
TNFRSF11A-201ENST00000269485 KRTAP17-1Q9BYP8 105 aa7.64□□□□□ -1.19
TNFRSF11A-201ENST00000269485 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
TNFRSF11A-201ENST00000269485 H1FX-AS1Q4G0G2 97 aa7.61□□□□□ -1.19
TNFRSF11A-201ENST00000269485 KRTAP10-4P60372 401 aaPredicted RBP7.6□□□□□ -1.19
TNFRSF11A-201ENST00000269485 LRP2P98164 4655 aa7.55□□□□□ -1.2
TNFRSF11A-201ENST00000269485 LUZP6Q538Z0 58 aa7.5□□□□□ -1.21
TNFRSF11A-201ENST00000269485 HSPG2P98160 4391 aa7.5□□□□□ -1.21
TNFRSF11A-201ENST00000269485 RPL37P61927 97 aaKnown RBP7.48□□□□□ -1.21
TNFRSF11A-201ENST00000269485 COX6B2Q6YFQ2 88 aa7.48□□□□□ -1.21
TNFRSF11A-201ENST00000269485 LPAP08519 4548 aa7.45□□□□□ -1.22
TNFRSF11A-201ENST00000269485 MUC2Q02817 5179 aa7.43□□□□□ -1.22
TNFRSF11A-201ENST00000269485 XP32Q5T750 250 aa7.42□□□□□ -1.22
TNFRSF11A-201ENST00000269485 KRTAP10-8P60410 259 aa7.41□□□□□ -1.22
TNFRSF11A-201ENST00000269485 TPRXLQ17RH7 258 aa7.41□□□□□ -1.22
TNFRSF11A-201ENST00000269485 PKHD1L1Q86WI1 4243 aa7.38□□□□□ -1.23
TNFRSF11A-201ENST00000269485 ABCA13Q86UQ4 5058 aa7.36□□□□□ -1.23
TNFRSF11A-201ENST00000269485 RPS29P62273 56 aaKnown RBP7.35□□□□□ -1.23
TNFRSF11A-201ENST00000269485 HERC2O95714 4834 aa7.35□□□□□ -1.23
TNFRSF11A-201ENST00000269485 MT1HL1P0DM35 61 aa7.33□□□□□ -1.24
TNFRSF11A-201ENST00000269485 KRTAP3-1Q9BYR8 98 aa7.3□□□□□ -1.24
TNFRSF11A-201ENST00000269485 S4R3F8 94 aa7.29□□□□□ -1.24
TNFRSF11A-201ENST00000269485 RNF213Q63HN8 5207 aa7.24□□□□□ -1.25
TNFRSF11A-201ENST00000269485 HERC1Q15751 4861 aa7.23□□□□□ -1.25
TNFRSF11A-201ENST00000269485 M0R2T5 61 aa7.19□□□□□ -1.26
TNFRSF11A-201ENST00000269485 KRTAP15-1Q3LI76 137 aa7.18□□□□□ -1.26
TNFRSF11A-201ENST00000269485 KRTAP13-4Q3LI77 160 aa7.18□□□□□ -1.26
TNFRSF11A-201ENST00000269485 TNXBP22105 4242 aa7.17□□□□□ -1.26
TNFRSF11A-201ENST00000269485 PCLOQ9Y6V0 5065 aa7.11□□□□□ -1.27
TNFRSF11A-201ENST00000269485 M0QZ58 72 aa7.07□□□□□ -1.28
TNFRSF11A-201ENST00000269485 FAT4Q6V0I7 4981 aa7.07□□□□□ -1.28
TNFRSF11A-201ENST00000269485 SEC61BP60468 96 aaKnown RBP7.06□□□□□ -1.28
TNFRSF11A-201ENST00000269485 R4GN34 69 aa7.05□□□□□ -1.28
TNFRSF11A-201ENST00000269485 KRTAP12-2P59991 146 aa7.03□□□□□ -1.28
TNFRSF11A-201ENST00000269485 UBR4Q5T4S7 5183 aa7□□□□□ -1.29
TNFRSF11A-201ENST00000269485 PLAC4Q8WY50 150 aa6.98□□□□□ -1.29
TNFRSF11A-201ENST00000269485 KRTAP10-6P60371 365 aaPredicted RBP6.95□□□□□ -1.3
TNFRSF11A-201ENST00000269485 KRTAP3-3Q9BYR6 98 aa6.9□□□□□ -1.3
TNFRSF11A-201ENST00000269485 BIRC6Q9NR09 4857 aa6.9□□□□□ -1.3
TNFRSF11A-201ENST00000269485 KRTAP4-1Q9BYQ7 146 aa6.89□□□□□ -1.31
TNFRSF11A-201ENST00000269485 CAMK2N1Q7Z7J9 78 aa6.89□□□□□ -1.31
TNFRSF11A-201ENST00000269485 FSIP2Q5CZC0 6907 aa6.86□□□□□ -1.31
TNFRSF11A-201ENST00000269485 KRTAP12-1P59990 96 aa6.8□□□□□ -1.32
TNFRSF11A-201ENST00000269485 KRTAP3-2Q9BYR7 98 aa6.8□□□□□ -1.32
TNFRSF11A-201ENST00000269485 LORP23490 312 aaPredicted RBP6.78□□□□□ -1.32
TNFRSF11A-201ENST00000269485 HMCN2Q8NDA2 5059 aa6.66□□□□□ -1.34
TNFRSF11A-201ENST00000269485 KRTAP10-10P60014 251 aa6.58□□□□□ -1.36
TNFRSF11A-201ENST00000269485 MUC17Q685J3 4493 aa6.47□□□□□ -1.37
TNFRSF11A-201ENST00000269485 USH2AO75445 5202 aa6.44□□□□□ -1.38
TNFRSF11A-201ENST00000269485 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
TNFRSF11A-201ENST00000269485 KRTAP19-2Q3LHN2 52 aa6.26□□□□□ -1.41
TNFRSF11A-201ENST00000269485 TNP1P09430 55 aa6.24□□□□□ -1.41
TNFRSF11A-201ENST00000269485 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
TNFRSF11A-201ENST00000269485 MT1HP80294 61 aa6.2□□□□□ -1.42
TNFRSF11A-201ENST00000269485 LCE2CQ5TA81 110 aa6.18□□□□□ -1.42
TNFRSF11A-201ENST00000269485 PRO2289Q9P1D8 64 aa6.15□□□□□ -1.42
TNFRSF11A-201ENST00000269485 KMT2DO14686 5537 aa6.12□□□□□ -1.43
TNFRSF11A-201ENST00000269485 MT1FP04733 61 aa6.1□□□□□ -1.43
TNFRSF11A-201ENST00000269485 MT2AP02795 61 aa6.05□□□□□ -1.44
TNFRSF11A-201ENST00000269485 OBSCNQ5VST9 7968 aa6.04□□□□□ -1.44
TNFRSF11A-201ENST00000269485 KRTAP19-1Q8IUB9 90 aa5.95□□□□□ -1.46
TNFRSF11A-201ENST00000269485 KRTAP9-8Q9BYQ0 159 aa5.91□□□□□ -1.46
TNFRSF11A-201ENST00000269485 DSTQ03001 7570 aaKnown RBP5.9□□□□□ -1.46
TNFRSF11A-201ENST00000269485 INE1O15225 51 aa5.88□□□□□ -1.47
TNFRSF11A-201ENST00000269485 LCE3AQ5TA76 89 aa5.84□□□□□ -1.47
TNFRSF11A-201ENST00000269485 SPRR2GQ9BYE4 73 aa5.8□□□□□ -1.48
TNFRSF11A-201ENST00000269485 SYNE1Q8NF91 8797 aaKnown RBP5.7□□□□□ -1.5
TNFRSF11A-201ENST00000269485 MT1BP07438 61 aa5.68□□□□□ -1.5
TNFRSF11A-201ENST00000269485 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
TNFRSF11A-201ENST00000269485 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
TNFRSF11A-201ENST00000269485 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.51
TNFRSF11A-201ENST00000269485 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.51
TNFRSF11A-201ENST00000269485 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.51
TNFRSF11A-201ENST00000269485 KRTAP9-3Q9BYQ3 159 aa5.64□□□□□ -1.51
TNFRSF11A-201ENST00000269485 FCGBPQ9Y6R7 5405 aaPredicted RBP5.64□□□□□ -1.51
TNFRSF11A-201ENST00000269485 LCE2BO14633 110 aa5.63□□□□□ -1.51
TNFRSF11A-201ENST00000269485 CRCT1Q9UGL9 99 aa5.59□□□□□ -1.52
TNFRSF11A-201ENST00000269485 MT1XP80297 61 aa5.58□□□□□ -1.52
TNFRSF11A-201ENST00000269485 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
TNFRSF11A-201ENST00000269485 MUC12Q9UKN1 5478 aa5.53□□□□□ -1.52
TNFRSF11A-201ENST00000269485 SSPOA2VEC9 5147 aa5.53□□□□□ -1.52
TNFRSF11A-201ENST00000269485 KRTAP12-3P60328 96 aa5.53□□□□□ -1.52
TNFRSF11A-201ENST00000269485 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
TNFRSF11A-201ENST00000269485 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
TNFRSF11A-201ENST00000269485 LCE2AQ5TA79 106 aaPredicted RBP5.49□□□□□ -1.53
TNFRSF11A-201ENST00000269485 KRTAP19-5Q3LI72 72 aa5.4□□□□□ -1.54
TNFRSF11A-201ENST00000269485 SYNE2Q8WXH0 6885 aaKnown RBP5.4□□□□□ -1.55
TNFRSF11A-201ENST00000269485 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
TNFRSF11A-201ENST00000269485 MACF1Q9UPN3 7388 aaKnown RBP5.26□□□□□ -1.57
TNFRSF11A-201ENST00000269485 KRTAP8-1Q8IUC2 63 aa5.22□□□□□ -1.57
TNFRSF11A-201ENST00000269485 SPRR2FQ96RM1 72 aa5.12□□□□□ -1.59
TNFRSF11A-201ENST00000269485 KRTAP4-3Q9BYR4 195 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms