RNA–Protein interactions for RNA: ENST00000269216.7

GATA6-201, Transcript of GATA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATA6, Length 3,770 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATA6-201ENST00000269216 FRAS1Q86XX4 4008 aa8.61□□□□□ -1.03
GATA6-201ENST00000269216 KRTAP12-2P59991 146 aa8.6□□□□□ -1.03
GATA6-201ENST00000269216 PLAC4Q8WY50 150 aa8.58□□□□□ -1.04
GATA6-201ENST00000269216 HYDINQ4G0P3 5121 aa8.58□□□□□ -1.04
GATA6-201ENST00000269216 DYNC1H1Q14204 4646 aaKnown RBP8.53□□□□□ -1.04
GATA6-201ENST00000269216 KRTAP10-6P60371 365 aaPredicted RBP8.51□□□□□ -1.05
GATA6-201ENST00000269216 KRTAP10-8P60410 259 aa8.51□□□□□ -1.05
GATA6-201ENST00000269216 XP32Q5T750 250 aa8.51□□□□□ -1.05
GATA6-201ENST00000269216 HECTD4Q9Y4D8 3996 aa8.48□□□□□ -1.05
GATA6-201ENST00000269216 PKHD1P08F94 4074 aa8.45□□□□□ -1.06
GATA6-201ENST00000269216 KRTAP10-4P60372 401 aaPredicted RBP8.44□□□□□ -1.06
GATA6-201ENST00000269216 VPS13BQ7Z7G8 4022 aa8.44□□□□□ -1.06
GATA6-201ENST00000269216 SEC61BP60468 96 aaKnown RBP8.44□□□□□ -1.06
GATA6-201ENST00000269216 KIAA1109Q2LD37 5005 aa8.41□□□□□ -1.06
GATA6-201ENST00000269216 KRTAP12-1P59990 96 aa8.37□□□□□ -1.07
GATA6-201ENST00000269216 KMT2CQ8NEZ4 4911 aaKnown RBP8.36□□□□□ -1.07
GATA6-201ENST00000269216 SACSQ9NZJ4 4579 aa8.36□□□□□ -1.07
GATA6-201ENST00000269216 MYCBP2O75592 4640 aa8.34□□□□□ -1.07
GATA6-201ENST00000269216 KRTAP4-5Q9BYR2 181 aa8.33□□□□□ -1.08
GATA6-201ENST00000269216 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
GATA6-201ENST00000269216 M0QZ58 72 aa8.3□□□□□ -1.08
GATA6-201ENST00000269216 LRP1Q07954 4544 aaKnown RBP8.27□□□□□ -1.09
GATA6-201ENST00000269216 M0R2T5 61 aa8.27□□□□□ -1.09
GATA6-201ENST00000269216 RYR1P21817 5038 aa8.27□□□□□ -1.09
GATA6-201ENST00000269216 RYR3Q15413 4870 aa8.26□□□□□ -1.09
GATA6-201ENST00000269216 APOBP04114 4563 aaKnown RBP8.26□□□□□ -1.09
GATA6-201ENST00000269216 R4GN34 69 aa8.24□□□□□ -1.09
GATA6-201ENST00000269216 MT1HL1P0DM35 61 aa8.24□□□□□ -1.09
GATA6-201ENST00000269216 KRTAP3-3Q9BYR6 98 aa8.23□□□□□ -1.09
GATA6-201ENST00000269216 FAT3Q8TDW7 4589 aa8.2□□□□□ -1.1
GATA6-201ENST00000269216 FAT2Q9NYQ8 4349 aa8.2□□□□□ -1.1
GATA6-201ENST00000269216 RYR2Q92736 4967 aa8.15□□□□□ -1.1
GATA6-201ENST00000269216 CAMK2N1Q7Z7J9 78 aa8.15□□□□□ -1.11
GATA6-201ENST00000269216 PKD1P98161 4303 aa8.09□□□□□ -1.11
GATA6-201ENST00000269216 KRTAP17-1Q9BYP8 105 aa8.06□□□□□ -1.12
GATA6-201ENST00000269216 HSPG2P98160 4391 aa7.84□□□□□ -1.15
GATA6-201ENST00000269216 EPPK1P58107 5090 aaKnown RBP7.83□□□□□ -1.16
GATA6-201ENST00000269216 LRP2P98164 4655 aa7.81□□□□□ -1.16
GATA6-201ENST00000269216 PP632Q6XCG6 107 aa7.81□□□□□ -1.16
GATA6-201ENST00000269216 HERC2O95714 4834 aa7.77□□□□□ -1.17
GATA6-201ENST00000269216 PCLOQ9Y6V0 5065 aa7.71□□□□□ -1.17
GATA6-201ENST00000269216 PRO2289Q9P1D8 64 aa7.65□□□□□ -1.18
GATA6-201ENST00000269216 LPAP08519 4548 aa7.61□□□□□ -1.19
GATA6-201ENST00000269216 TNP1P09430 55 aa7.6□□□□□ -1.19
GATA6-201ENST00000269216 KRTAP4-1Q9BYQ7 146 aa7.58□□□□□ -1.2
GATA6-201ENST00000269216 PKHD1L1Q86WI1 4243 aa7.56□□□□□ -1.2
GATA6-201ENST00000269216 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
GATA6-201ENST00000269216 KRTAP10-10P60014 251 aa7.55□□□□□ -1.2
GATA6-201ENST00000269216 ABCA13Q86UQ4 5058 aa7.53□□□□□ -1.2
GATA6-201ENST00000269216 BIRC6Q9NR09 4857 aa7.47□□□□□ -1.21
GATA6-201ENST00000269216 TNXBP22105 4242 aa7.45□□□□□ -1.22
GATA6-201ENST00000269216 HERC1Q15751 4861 aa7.42□□□□□ -1.22
GATA6-201ENST00000269216 FSIP2Q5CZC0 6907 aa7.38□□□□□ -1.23
GATA6-201ENST00000269216 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
GATA6-201ENST00000269216 MUC2Q02817 5179 aa7.34□□□□□ -1.23
GATA6-201ENST00000269216 INE1O15225 51 aa7.31□□□□□ -1.24
GATA6-201ENST00000269216 UBR4Q5T4S7 5183 aa7.23□□□□□ -1.25
GATA6-201ENST00000269216 SPRR5A0A1B0GTR4 108 aa7.07□□□□□ -1.28
GATA6-201ENST00000269216 FAT4Q6V0I7 4981 aa7.06□□□□□ -1.28
GATA6-201ENST00000269216 MT1HP80294 61 aa6.98□□□□□ -1.29
GATA6-201ENST00000269216 LCE3AQ5TA76 89 aa6.92□□□□□ -1.3
GATA6-201ENST00000269216 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
GATA6-201ENST00000269216 MT2AP02795 61 aa6.84□□□□□ -1.31
GATA6-201ENST00000269216 HMCN2Q8NDA2 5059 aa6.84□□□□□ -1.31
GATA6-201ENST00000269216 MT1FP04733 61 aa6.83□□□□□ -1.32
GATA6-201ENST00000269216 KRTAP19-2Q3LHN2 52 aa6.8□□□□□ -1.32
GATA6-201ENST00000269216 LCE2CQ5TA81 110 aa6.79□□□□□ -1.32
GATA6-201ENST00000269216 MUC17Q685J3 4493 aa6.76□□□□□ -1.33
GATA6-201ENST00000269216 FLGP20930 4061 aaPredicted RBP6.71□□□□□ -1.33
GATA6-201ENST00000269216 KRTAP19-1Q8IUB9 90 aa6.67□□□□□ -1.34
GATA6-201ENST00000269216 SPRR2GQ9BYE4 73 aa6.67□□□□□ -1.34
GATA6-201ENST00000269216 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
GATA6-201ENST00000269216 KRTAP10-12P60413 245 aa6.57□□□□□ -1.36
GATA6-201ENST00000269216 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
GATA6-201ENST00000269216 KRTAP8-1Q8IUC2 63 aa6.38□□□□□ -1.39
GATA6-201ENST00000269216 MT1BP07438 61 aa6.36□□□□□ -1.39
GATA6-201ENST00000269216 USH2AO75445 5202 aa6.32□□□□□ -1.4
GATA6-201ENST00000269216 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
GATA6-201ENST00000269216 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
GATA6-201ENST00000269216 KRTAP10-7P60409 375 aaPredicted RBP6.28□□□□□ -1.4
GATA6-201ENST00000269216 MT1XP80297 61 aa6.28□□□□□ -1.4
GATA6-201ENST00000269216 KRTAP10-5P60370 271 aa6.25□□□□□ -1.41
GATA6-201ENST00000269216 LCE2BO14633 110 aa6.21□□□□□ -1.42
GATA6-201ENST00000269216 OBSCNQ5VST9 7968 aa6.14□□□□□ -1.43
GATA6-201ENST00000269216 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
GATA6-201ENST00000269216 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
GATA6-201ENST00000269216 KRTAP19-5Q3LI72 72 aa6.1□□□□□ -1.43
GATA6-201ENST00000269216 CRCT1Q9UGL9 99 aa6.09□□□□□ -1.43
GATA6-201ENST00000269216 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
GATA6-201ENST00000269216 LCE2AQ5TA79 106 aaPredicted RBP6.04□□□□□ -1.44
GATA6-201ENST00000269216 KMT2DO14686 5537 aa6.02□□□□□ -1.45
GATA6-201ENST00000269216 KRTAP9-2Q9BYQ4 174 aa6□□□□□ -1.45
GATA6-201ENST00000269216 DSTQ03001 7570 aaKnown RBP5.94□□□□□ -1.46
GATA6-201ENST00000269216 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
GATA6-201ENST00000269216 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
GATA6-201ENST00000269216 SPRR2FQ96RM1 72 aa5.8□□□□□ -1.48
GATA6-201ENST00000269216 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
GATA6-201ENST00000269216 SYNE2Q8WXH0 6885 aaKnown RBP5.79□□□□□ -1.48
GATA6-201ENST00000269216 SSPOA2VEC9 5147 aa5.75□□□□□ -1.49
GATA6-201ENST00000269216 SYNE1Q8NF91 8797 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms