RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 TPRXLQ17RH7 258 aa9.69□□□□□ -0.86
SMARCC2-201ENST00000267064 SEC61BP60468 96 aaKnown RBP9.67□□□□□ -0.86
SMARCC2-201ENST00000267064 PKHD1L1Q86WI1 4243 aa9.64□□□□□ -0.87
SMARCC2-201ENST00000267064 SVIPQ8NHG7 77 aa9.62□□□□□ -0.87
SMARCC2-201ENST00000267064 A0A1B0GU33 70 aa9.61□□□□□ -0.87
SMARCC2-201ENST00000267064 A0A0D9SG42 100 aa9.57□□□□□ -0.88
SMARCC2-201ENST00000267064 SPATA8Q6RVD6 105 aa9.55□□□□□ -0.88
SMARCC2-201ENST00000267064 H1FX-AS1Q4G0G2 97 aa9.54□□□□□ -0.88
SMARCC2-201ENST00000267064 CSAG1Q6PB30 78 aa9.51□□□□□ -0.89
SMARCC2-201ENST00000267064 K7ERS5 55 aa9.5□□□□□ -0.89
SMARCC2-201ENST00000267064 HERC2O95714 4834 aa9.5□□□□□ -0.89
SMARCC2-201ENST00000267064 TNXBP22105 4242 aa9.49□□□□□ -0.89
SMARCC2-201ENST00000267064 LRP2P98164 4655 aa9.45□□□□□ -0.9
SMARCC2-201ENST00000267064 LINC01554Q52M75 96 aa9.42□□□□□ -0.9
SMARCC2-201ENST00000267064 ADM2Q7Z4H4 148 aa9.41□□□□□ -0.9
SMARCC2-201ENST00000267064 ABCA13Q86UQ4 5058 aa9.41□□□□□ -0.9
SMARCC2-201ENST00000267064 LPAP08519 4548 aa9.37□□□□□ -0.91
SMARCC2-201ENST00000267064 SPINT4Q6UDR6 99 aa9.31□□□□□ -0.92
SMARCC2-201ENST00000267064 H0YAA0 97 aa9.29□□□□□ -0.92
SMARCC2-201ENST00000267064 P0C880 135 aa9.28□□□□□ -0.92
SMARCC2-201ENST00000267064 BIRC6Q9NR09 4857 aa9.28□□□□□ -0.92
SMARCC2-201ENST00000267064 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
SMARCC2-201ENST00000267064 KTN1-AS1Q86SY8 53 aa9.25□□□□□ -0.93
SMARCC2-201ENST00000267064 PRAC1Q96KF2 57 aa9.23□□□□□ -0.93
SMARCC2-201ENST00000267064 A6NN06 94 aa9.22□□□□□ -0.93
SMARCC2-201ENST00000267064 M0R2T5 61 aa9.2□□□□□ -0.94
SMARCC2-201ENST00000267064 R4GN34 69 aa9.18□□□□□ -0.94
SMARCC2-201ENST00000267064 M0QZ58 72 aa9.17□□□□□ -0.94
SMARCC2-201ENST00000267064 KRTAP4-1Q9BYQ7 146 aa9.15□□□□□ -0.95
SMARCC2-201ENST00000267064 CRIPTQ9P021 101 aa9.13□□□□□ -0.95
SMARCC2-201ENST00000267064 KRTAP10-6P60371 365 aaPredicted RBP9.1□□□□□ -0.95
SMARCC2-201ENST00000267064 KRTAP13-4Q3LI77 160 aa9.05□□□□□ -0.96
SMARCC2-201ENST00000267064 HERC1Q15751 4861 aa9.03□□□□□ -0.96
SMARCC2-201ENST00000267064 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.97
SMARCC2-201ENST00000267064 PCLOQ9Y6V0 5065 aa8.94□□□□□ -0.98
SMARCC2-201ENST00000267064 MUC2Q02817 5179 aa8.92□□□□□ -0.98
SMARCC2-201ENST00000267064 CAMK2N1Q7Z7J9 78 aa8.85□□□□□ -0.99
SMARCC2-201ENST00000267064 ROMO1P60602 79 aa8.83□□□□□ -1
SMARCC2-201ENST00000267064 KRTAP12-2P59991 146 aa8.8□□□□□ -1
SMARCC2-201ENST00000267064 LORP23490 312 aaPredicted RBP8.75□□□□□ -1.01
SMARCC2-201ENST00000267064 KRTAP12-1P59990 96 aa8.7□□□□□ -1.02
SMARCC2-201ENST00000267064 RNF213Q63HN8 5207 aa8.68□□□□□ -1.02
SMARCC2-201ENST00000267064 C10orf95Q9H7T3 257 aa8.64□□□□□ -1.03
SMARCC2-201ENST00000267064 HMCN2Q8NDA2 5059 aa8.63□□□□□ -1.03
SMARCC2-201ENST00000267064 KRTAP10-10P60014 251 aa8.6□□□□□ -1.03
SMARCC2-201ENST00000267064 UBR4Q5T4S7 5183 aa8.58□□□□□ -1.04
SMARCC2-201ENST00000267064 KRTAP25-1Q3LHN0 102 aa8.58□□□□□ -1.04
SMARCC2-201ENST00000267064 FAT4Q6V0I7 4981 aa8.57□□□□□ -1.04
SMARCC2-201ENST00000267064 MUC17Q685J3 4493 aa8.53□□□□□ -1.04
SMARCC2-201ENST00000267064 KRTAP19-2Q3LHN2 52 aa8.5□□□□□ -1.05
SMARCC2-201ENST00000267064 PLAC4Q8WY50 150 aa8.48□□□□□ -1.05
SMARCC2-201ENST00000267064 MT1HP80294 61 aa8.39□□□□□ -1.07
SMARCC2-201ENST00000267064 LCE2CQ5TA81 110 aa8.37□□□□□ -1.07
SMARCC2-201ENST00000267064 FLGP20930 4061 aaPredicted RBP8.28□□□□□ -1.08
SMARCC2-201ENST00000267064 MT2AP02795 61 aa8.18□□□□□ -1.1
SMARCC2-201ENST00000267064 TNP1P09430 55 aa8.18□□□□□ -1.1
SMARCC2-201ENST00000267064 MT1FP04733 61 aa8.17□□□□□ -1.1
SMARCC2-201ENST00000267064 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
SMARCC2-201ENST00000267064 KRTAP9-8Q9BYQ0 159 aa8□□□□□ -1.13
SMARCC2-201ENST00000267064 SPRR2GQ9BYE4 73 aa7.99□□□□□ -1.13
SMARCC2-201ENST00000267064 PP632Q6XCG6 107 aa7.86□□□□□ -1.15
SMARCC2-201ENST00000267064 PRO2289Q9P1D8 64 aa7.75□□□□□ -1.17
SMARCC2-201ENST00000267064 FSIP2Q5CZC0 6907 aa7.69□□□□□ -1.18
SMARCC2-201ENST00000267064 KRTAP9-3Q9BYQ3 159 aa7.68□□□□□ -1.18
SMARCC2-201ENST00000267064 MT1BP07438 61 aa7.67□□□□□ -1.18
SMARCC2-201ENST00000267064 NDUFAF8A1L188 74 aa7.65□□□□□ -1.18
SMARCC2-201ENST00000267064 KRTAP19-8Q3LI54 63 aa7.65□□□□□ -1.19
SMARCC2-201ENST00000267064 LUZP6Q538Z0 58 aa7.65□□□□□ -1.19
SMARCC2-201ENST00000267064 LCE3AQ5TA76 89 aa7.62□□□□□ -1.19
SMARCC2-201ENST00000267064 USH2AO75445 5202 aa7.57□□□□□ -1.2
SMARCC2-201ENST00000267064 KRTAP10-12P60413 245 aa7.54□□□□□ -1.2
SMARCC2-201ENST00000267064 LCE2AQ5TA79 106 aaPredicted RBP7.54□□□□□ -1.2
SMARCC2-201ENST00000267064 LCE2BO14633 110 aa7.53□□□□□ -1.2
SMARCC2-201ENST00000267064 MT1XP80297 61 aa7.52□□□□□ -1.2
SMARCC2-201ENST00000267064 KRTAP10-5P60370 271 aa7.5□□□□□ -1.21
SMARCC2-201ENST00000267064 KRTAP15-1Q3LI76 137 aa7.48□□□□□ -1.21
SMARCC2-201ENST00000267064 KRTAP10-7P60409 375 aaPredicted RBP7.42□□□□□ -1.22
SMARCC2-201ENST00000267064 H3BS24 57 aa7.4□□□□□ -1.22
SMARCC2-201ENST00000267064 KRTAP23-1A1A580 65 aa7.33□□□□□ -1.24
SMARCC2-201ENST00000267064 KRTAP12-3P60328 96 aa7.32□□□□□ -1.24
SMARCC2-201ENST00000267064 KRTAP4-8A0A0G2JLE6 195 aa7.19□□□□□ -1.26
SMARCC2-201ENST00000267064 KRTAP4-8Q9BYQ9 185 aa7.19□□□□□ -1.26
SMARCC2-201ENST00000267064 KRTAP8-1Q8IUC2 63 aa7.16□□□□□ -1.26
SMARCC2-201ENST00000267064 KMT2DO14686 5537 aa7.15□□□□□ -1.27
SMARCC2-201ENST00000267064 KRTAP19-5Q3LI72 72 aa7.11□□□□□ -1.27
SMARCC2-201ENST00000267064 SSPOA2VEC9 5147 aa6.94□□□□□ -1.3
SMARCC2-201ENST00000267064 A0A0A0MQY5 61 aa6.86□□□□□ -1.31
SMARCC2-201ENST00000267064 KRTAP19-6Q3LI70 58 aa6.8□□□□□ -1.32
SMARCC2-201ENST00000267064 LCE3CQ5T5A8 94 aa6.71□□□□□ -1.33
SMARCC2-201ENST00000267064 KRTAP4-7Q9BYR0 210 aa6.7□□□□□ -1.34
SMARCC2-201ENST00000267064 SPRR5A0A1B0GTR4 108 aa6.69□□□□□ -1.34
SMARCC2-201ENST00000267064 CRCT1Q9UGL9 99 aa6.67□□□□□ -1.34
SMARCC2-201ENST00000267064 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
SMARCC2-201ENST00000267064 KRTAP19-7Q3SYF9 63 aa6.66□□□□□ -1.34
SMARCC2-201ENST00000267064 FCGBPQ9Y6R7 5405 aaPredicted RBP6.65□□□□□ -1.35
SMARCC2-201ENST00000267064 LCE2DQ5TA82 110 aaPredicted RBP6.64□□□□□ -1.35
SMARCC2-201ENST00000267064 KRTAP9-2Q9BYQ4 174 aa6.63□□□□□ -1.35
SMARCC2-201ENST00000267064 MT1EP04732 61 aa6.57□□□□□ -1.36
SMARCC2-201ENST00000267064 MUC12Q9UKN1 5478 aa6.54□□□□□ -1.36
SMARCC2-201ENST00000267064 MT1LQ93083 61 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms