RNA–Protein interactions for RNA: ENST00000265997.4

CPEB3-201, Transcript of cytoplasmic polyadenylation element binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPEB3, Length 4,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3-201ENST00000265997 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
CPEB3-201ENST00000265997 KRTAP10-12P60413 245 aa6.6□□□□□ -1.35
CPEB3-201ENST00000265997 VPS13DQ5THJ4 4388 aa6.6□□□□□ -1.35
CPEB3-201ENST00000265997 DNAH10Q8IVF4 4471 aa6.6□□□□□ -1.35
CPEB3-201ENST00000265997 DNAH17Q9UFH2 4485 aa6.59□□□□□ -1.35
CPEB3-201ENST00000265997 DNAH11Q96DT5 4516 aa6.56□□□□□ -1.36
CPEB3-201ENST00000265997 CSMD3Q7Z407 3707 aa6.54□□□□□ -1.36
CPEB3-201ENST00000265997 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
CPEB3-201ENST00000265997 DNAH2Q9P225 4427 aa6.47□□□□□ -1.37
CPEB3-201ENST00000265997 DNHD1Q96M86 4753 aa6.44□□□□□ -1.38
CPEB3-201ENST00000265997 KRTAP12-3P60328 96 aa6.44□□□□□ -1.38
CPEB3-201ENST00000265997 DYNC1H1Q14204 4646 aaKnown RBP6.43□□□□□ -1.38
CPEB3-201ENST00000265997 STARD9Q9P2P6 4700 aa6.39□□□□□ -1.39
CPEB3-201ENST00000265997 INE1O15225 51 aa6.38□□□□□ -1.39
CPEB3-201ENST00000265997 LCE3AQ5TA76 89 aa6.38□□□□□ -1.39
CPEB3-201ENST00000265997 LRP1BQ9NZR2 4599 aa6.37□□□□□ -1.39
CPEB3-201ENST00000265997 DNAH3Q8TD57 4116 aa6.36□□□□□ -1.39
CPEB3-201ENST00000265997 KRTAP4-1Q9BYQ7 146 aa6.35□□□□□ -1.39
CPEB3-201ENST00000265997 DYNC2H1Q8NCM8 4307 aaKnown RBP6.33□□□□□ -1.4
CPEB3-201ENST00000265997 SACSQ9NZJ4 4579 aa6.31□□□□□ -1.4
CPEB3-201ENST00000265997 FAT1Q14517 4588 aa6.27□□□□□ -1.41
CPEB3-201ENST00000265997 FAT2Q9NYQ8 4349 aa6.26□□□□□ -1.41
CPEB3-201ENST00000265997 DNAH8Q96JB1 4490 aa6.24□□□□□ -1.41
CPEB3-201ENST00000265997 ANK2Q01484 3957 aa6.21□□□□□ -1.42
CPEB3-201ENST00000265997 MT1HP80294 61 aa6.21□□□□□ -1.42
CPEB3-201ENST00000265997 SPRR2GQ9BYE4 73 aa6.18□□□□□ -1.42
CPEB3-201ENST00000265997 PRKDCP78527 4128 aaKnown RBP6.18□□□□□ -1.42
CPEB3-201ENST00000265997 RYR1P21817 5038 aa6.17□□□□□ -1.42
CPEB3-201ENST00000265997 MT2AP02795 61 aa6.14□□□□□ -1.43
CPEB3-201ENST00000265997 CRCT1Q9UGL9 99 aa6.1□□□□□ -1.43
CPEB3-201ENST00000265997 DNAH6Q9C0G6 4158 aa6.07□□□□□ -1.44
CPEB3-201ENST00000265997 APOBP04114 4563 aaKnown RBP6.07□□□□□ -1.44
CPEB3-201ENST00000265997 KMT2AQ03164 3969 aa6.05□□□□□ -1.44
CPEB3-201ENST00000265997 VPS13BQ7Z7G8 4022 aa6.02□□□□□ -1.45
CPEB3-201ENST00000265997 KRTAP8-1Q8IUC2 63 aa6.02□□□□□ -1.45
CPEB3-201ENST00000265997 MT1FP04733 61 aa6□□□□□ -1.45
CPEB3-201ENST00000265997 RYR3Q15413 4870 aa5.94□□□□□ -1.46
CPEB3-201ENST00000265997 CMYA5Q8N3K9 4069 aa5.93□□□□□ -1.46
CPEB3-201ENST00000265997 KIAA1109Q2LD37 5005 aa5.92□□□□□ -1.46
CPEB3-201ENST00000265997 RYR2Q92736 4967 aa5.92□□□□□ -1.46
CPEB3-201ENST00000265997 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
CPEB3-201ENST00000265997 DNAH7Q8WXX0 4024 aa5.88□□□□□ -1.47
CPEB3-201ENST00000265997 LYSTQ99698 3801 aa5.85□□□□□ -1.47
CPEB3-201ENST00000265997 HECTD4Q9Y4D8 3996 aa5.83□□□□□ -1.48
CPEB3-201ENST00000265997 FAT3Q8TDW7 4589 aa5.82□□□□□ -1.48
CPEB3-201ENST00000265997 MYCBP2O75592 4640 aa5.81□□□□□ -1.48
CPEB3-201ENST00000265997 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
CPEB3-201ENST00000265997 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
CPEB3-201ENST00000265997 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
CPEB3-201ENST00000265997 FRAS1Q86XX4 4008 aa5.77□□□□□ -1.49
CPEB3-201ENST00000265997 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
CPEB3-201ENST00000265997 LRP1Q07954 4544 aaKnown RBP5.75□□□□□ -1.49
CPEB3-201ENST00000265997 KRTAP10-5P60370 271 aa5.74□□□□□ -1.49
CPEB3-201ENST00000265997 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
CPEB3-201ENST00000265997 HYDINQ4G0P3 5121 aa5.61□□□□□ -1.51
CPEB3-201ENST00000265997 HSPG2P98160 4391 aa5.6□□□□□ -1.51
CPEB3-201ENST00000265997 HERC1Q15751 4861 aa5.6□□□□□ -1.51
CPEB3-201ENST00000265997 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.51
CPEB3-201ENST00000265997 HERC2O95714 4834 aa5.59□□□□□ -1.52
CPEB3-201ENST00000265997 MT1XP80297 61 aa5.58□□□□□ -1.52
CPEB3-201ENST00000265997 SPRR2FQ96RM1 72 aa5.57□□□□□ -1.52
CPEB3-201ENST00000265997 KRTAP9-8Q9BYQ0 159 aa5.57□□□□□ -1.52
CPEB3-201ENST00000265997 MT1BP07438 61 aa5.56□□□□□ -1.52
CPEB3-201ENST00000265997 LCE2CQ5TA81 110 aa5.54□□□□□ -1.52
CPEB3-201ENST00000265997 BIRC6Q9NR09 4857 aa5.54□□□□□ -1.52
CPEB3-201ENST00000265997 PKD1P98161 4303 aa5.48□□□□□ -1.53
CPEB3-201ENST00000265997 LRP2P98164 4655 aa5.48□□□□□ -1.53
CPEB3-201ENST00000265997 PKHD1P08F94 4074 aa5.45□□□□□ -1.54
CPEB3-201ENST00000265997 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
CPEB3-201ENST00000265997 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.54
CPEB3-201ENST00000265997 KRTAP19-2Q3LHN2 52 aa5.36□□□□□ -1.55
CPEB3-201ENST00000265997 PCLOQ9Y6V0 5065 aa5.36□□□□□ -1.55
CPEB3-201ENST00000265997 PKHD1L1Q86WI1 4243 aa5.36□□□□□ -1.55
CPEB3-201ENST00000265997 KMT2CQ8NEZ4 4911 aaKnown RBP5.29□□□□□ -1.56
CPEB3-201ENST00000265997 TNXBP22105 4242 aa5.29□□□□□ -1.56
CPEB3-201ENST00000265997 LPAP08519 4548 aa5.24□□□□□ -1.57
CPEB3-201ENST00000265997 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
CPEB3-201ENST00000265997 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
CPEB3-201ENST00000265997 MUC17Q685J3 4493 aa5.22□□□□□ -1.57
CPEB3-201ENST00000265997 MT1GP13640 62 aa5.22□□□□□ -1.57
CPEB3-201ENST00000265997 SPRR2EP22531 72 aa5.19□□□□□ -1.58
CPEB3-201ENST00000265997 SPRR2BP35325 72 aa5.19□□□□□ -1.58
CPEB3-201ENST00000265997 SPRR2AP35326 72 aa5.19□□□□□ -1.58
CPEB3-201ENST00000265997 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
CPEB3-201ENST00000265997 LCE2BO14633 110 aa5.14□□□□□ -1.59
CPEB3-201ENST00000265997 LCE3BQ5TA77 95 aa5.09□□□□□ -1.6
CPEB3-201ENST00000265997 ABCA13Q86UQ4 5058 aa5.07□□□□□ -1.6
CPEB3-201ENST00000265997 MT1LQ93083 61 aa5.03□□□□□ -1.6
CPEB3-201ENST00000265997 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.6
CPEB3-201ENST00000265997 SPRR2DP22532 72 aa5.03□□□□□ -1.6
CPEB3-201ENST00000265997 EPPK1P58107 5090 aaKnown RBP5.02□□□□□ -1.61
CPEB3-201ENST00000265997 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
CPEB3-201ENST00000265997 MT1EP04732 61 aa5.01□□□□□ -1.61
CPEB3-201ENST00000265997 KRTAP19-6Q3LI70 58 aa4.92□□□□□ -1.62
CPEB3-201ENST00000265997 KRTAP4-7Q9BYR0 210 aa4.9□□□□□ -1.62
CPEB3-201ENST00000265997 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
CPEB3-201ENST00000265997 FAT4Q6V0I7 4981 aa4.86□□□□□ -1.63
CPEB3-201ENST00000265997 RNF213Q63HN8 5207 aa4.85□□□□□ -1.63
CPEB3-201ENST00000265997 LCE2AQ5TA79 106 aaPredicted RBP4.84□□□□□ -1.63
CPEB3-201ENST00000265997 MT1MQ8N339 61 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms