RNA–Protein interactions for RNA: ENST00000265388.9

TNPO3-201, Transcript of transportin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO3, Length 4,153 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-201ENST00000265388 KRTAP10-8P60410 259 aa4.32□□□□□ -1.72
TNPO3-201ENST00000265388 FAT2Q9NYQ8 4349 aa4.32□□□□□ -1.72
TNPO3-201ENST00000265388 PKD1P98161 4303 aa4.3□□□□□ -1.72
TNPO3-201ENST00000265388 PKHD1P08F94 4074 aa4.3□□□□□ -1.72
TNPO3-201ENST00000265388 SACSQ9NZJ4 4579 aa4.3□□□□□ -1.72
TNPO3-201ENST00000265388 NDUFAF8A1L188 74 aa4.28□□□□□ -1.73
TNPO3-201ENST00000265388 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
TNPO3-201ENST00000265388 J3QL48 77 aa4.23□□□□□ -1.73
TNPO3-201ENST00000265388 KRTAP10-6P60371 365 aaPredicted RBP4.22□□□□□ -1.73
TNPO3-201ENST00000265388 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.73
TNPO3-201ENST00000265388 KRTAP3-3Q9BYR6 98 aa4.21□□□□□ -1.74
TNPO3-201ENST00000265388 APOBP04114 4563 aaKnown RBP4.2□□□□□ -1.74
TNPO3-201ENST00000265388 M0QZ58 72 aa4.19□□□□□ -1.74
TNPO3-201ENST00000265388 R4GN34 69 aa4.19□□□□□ -1.74
TNPO3-201ENST00000265388 C10orf95Q9H7T3 257 aa4.18□□□□□ -1.74
TNPO3-201ENST00000265388 LRP1Q07954 4544 aaKnown RBP4.16□□□□□ -1.74
TNPO3-201ENST00000265388 SEC61BP60468 96 aaKnown RBP4.16□□□□□ -1.74
TNPO3-201ENST00000265388 KRTAP3-2Q9BYR7 98 aa4.16□□□□□ -1.74
TNPO3-201ENST00000265388 MYCBP2O75592 4640 aa4.15□□□□□ -1.74
TNPO3-201ENST00000265388 TPRXLQ17RH7 258 aa4.15□□□□□ -1.74
TNPO3-201ENST00000265388 MT1HL1P0DM35 61 aa4.15□□□□□ -1.75
TNPO3-201ENST00000265388 KRTAP12-2P59991 146 aa4.13□□□□□ -1.75
TNPO3-201ENST00000265388 RYR2Q92736 4967 aa4.12□□□□□ -1.75
TNPO3-201ENST00000265388 FAT3Q8TDW7 4589 aa4.09□□□□□ -1.76
TNPO3-201ENST00000265388 PKHD1L1Q86WI1 4243 aa4.08□□□□□ -1.76
TNPO3-201ENST00000265388 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
TNPO3-201ENST00000265388 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
TNPO3-201ENST00000265388 KMT2CQ8NEZ4 4911 aaKnown RBP4.06□□□□□ -1.76
TNPO3-201ENST00000265388 KIAA1109Q2LD37 5005 aa4.05□□□□□ -1.76
TNPO3-201ENST00000265388 KRTAP17-1Q9BYP8 105 aa4.04□□□□□ -1.76
TNPO3-201ENST00000265388 RYR1P21817 5038 aa4.02□□□□□ -1.77
TNPO3-201ENST00000265388 RYR3Q15413 4870 aa4.02□□□□□ -1.77
TNPO3-201ENST00000265388 HSPG2P98160 4391 aa4.01□□□□□ -1.77
TNPO3-201ENST00000265388 KRTAP4-5Q9BYR2 181 aa4□□□□□ -1.77
TNPO3-201ENST00000265388 KRTAP15-1Q3LI76 137 aa3.99□□□□□ -1.77
TNPO3-201ENST00000265388 TNXBP22105 4242 aa3.99□□□□□ -1.77
TNPO3-201ENST00000265388 LRP2P98164 4655 aa3.94□□□□□ -1.78
TNPO3-201ENST00000265388 M0R2T5 61 aa3.9□□□□□ -1.79
TNPO3-201ENST00000265388 LORP23490 312 aaPredicted RBP3.89□□□□□ -1.79
TNPO3-201ENST00000265388 KRTAP4-1Q9BYQ7 146 aa3.86□□□□□ -1.79
TNPO3-201ENST00000265388 LPAP08519 4548 aa3.85□□□□□ -1.79
TNPO3-201ENST00000265388 PLAC4Q8WY50 150 aa3.85□□□□□ -1.79
TNPO3-201ENST00000265388 TNP1P09430 55 aa3.8□□□□□ -1.8
TNPO3-201ENST00000265388 EPPK1P58107 5090 aaKnown RBP3.8□□□□□ -1.8
TNPO3-201ENST00000265388 PP632Q6XCG6 107 aa3.8□□□□□ -1.8
TNPO3-201ENST00000265388 ABCA13Q86UQ4 5058 aa3.75□□□□□ -1.81
TNPO3-201ENST00000265388 HERC2O95714 4834 aa3.72□□□□□ -1.81
TNPO3-201ENST00000265388 KRTAP10-10P60014 251 aa3.67□□□□□ -1.82
TNPO3-201ENST00000265388 KRTAP19-2Q3LHN2 52 aa3.61□□□□□ -1.83
TNPO3-201ENST00000265388 MUC17Q685J3 4493 aa3.6□□□□□ -1.83
TNPO3-201ENST00000265388 MUC2Q02817 5179 aa3.56□□□□□ -1.84
TNPO3-201ENST00000265388 BIRC6Q9NR09 4857 aa3.54□□□□□ -1.84
TNPO3-201ENST00000265388 FLGP20930 4061 aaPredicted RBP3.53□□□□□ -1.84
TNPO3-201ENST00000265388 HERC1Q15751 4861 aa3.5□□□□□ -1.85
TNPO3-201ENST00000265388 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
TNPO3-201ENST00000265388 SPRR2GQ9BYE4 73 aa3.49□□□□□ -1.85
TNPO3-201ENST00000265388 MT1HP80294 61 aa3.49□□□□□ -1.85
TNPO3-201ENST00000265388 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
TNPO3-201ENST00000265388 LCE2CQ5TA81 110 aa3.47□□□□□ -1.85
TNPO3-201ENST00000265388 KRTAP19-1Q8IUB9 90 aa3.47□□□□□ -1.85
TNPO3-201ENST00000265388 MT2AP02795 61 aa3.46□□□□□ -1.86
TNPO3-201ENST00000265388 MT1FP04733 61 aa3.45□□□□□ -1.86
TNPO3-201ENST00000265388 FAT4Q6V0I7 4981 aa3.43□□□□□ -1.86
TNPO3-201ENST00000265388 PRO2289Q9P1D8 64 aa3.41□□□□□ -1.86
TNPO3-201ENST00000265388 PCLOQ9Y6V0 5065 aa3.4□□□□□ -1.86
TNPO3-201ENST00000265388 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.87
TNPO3-201ENST00000265388 KRTAP10-12P60413 245 aa3.39□□□□□ -1.87
TNPO3-201ENST00000265388 RNF213Q63HN8 5207 aa3.36□□□□□ -1.87
TNPO3-201ENST00000265388 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
TNPO3-201ENST00000265388 KRTAP9-8Q9BYQ0 159 aa3.34□□□□□ -1.87
TNPO3-201ENST00000265388 LCE2DQ5TA82 110 aaPredicted RBP3.33□□□□□ -1.88
TNPO3-201ENST00000265388 UBR4Q5T4S7 5183 aa3.32□□□□□ -1.88
TNPO3-201ENST00000265388 KRTAP19-8Q3LI54 63 aa3.31□□□□□ -1.88
TNPO3-201ENST00000265388 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
TNPO3-201ENST00000265388 MT1BP07438 61 aa3.29□□□□□ -1.88
TNPO3-201ENST00000265388 INE1O15225 51 aa3.29□□□□□ -1.88
TNPO3-201ENST00000265388 KRTAP8-1Q8IUC2 63 aa3.29□□□□□ -1.88
TNPO3-201ENST00000265388 MT1XP80297 61 aa3.28□□□□□ -1.88
TNPO3-201ENST00000265388 KRTAP10-5P60370 271 aa3.28□□□□□ -1.88
TNPO3-201ENST00000265388 KRTAP10-7P60409 375 aaPredicted RBP3.25□□□□□ -1.89
TNPO3-201ENST00000265388 KRTAP9-3Q9BYQ3 159 aa3.21□□□□□ -1.9
TNPO3-201ENST00000265388 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
TNPO3-201ENST00000265388 LCE2BO14633 110 aa3.1□□□□□ -1.91
TNPO3-201ENST00000265388 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
TNPO3-201ENST00000265388 KRTAP4-8A0A0G2JLE6 195 aa3.07□□□□□ -1.92
TNPO3-201ENST00000265388 KRTAP4-8Q9BYQ9 185 aa3.07□□□□□ -1.92
TNPO3-201ENST00000265388 LCE2AQ5TA79 106 aaPredicted RBP3.05□□□□□ -1.92
TNPO3-201ENST00000265388 USH2AO75445 5202 aa3□□□□□ -1.93
TNPO3-201ENST00000265388 KMT2DO14686 5537 aa2.97□□□□□ -1.93
TNPO3-201ENST00000265388 KRTAP9-6A0A140TA67 174 aa2.96□□□□□ -1.94
TNPO3-201ENST00000265388 KRTAP4-7Q9BYR0 210 aa2.95□□□□□ -1.94
TNPO3-201ENST00000265388 CRCT1Q9UGL9 99 aa2.93□□□□□ -1.94
TNPO3-201ENST00000265388 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
TNPO3-201ENST00000265388 KRTAP19-7Q3SYF9 63 aa2.89□□□□□ -1.95
TNPO3-201ENST00000265388 FSIP2Q5CZC0 6907 aa2.88□□□□□ -1.95
TNPO3-201ENST00000265388 MT1LQ93083 61 aa2.87□□□□□ -1.95
TNPO3-201ENST00000265388 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
TNPO3-201ENST00000265388 MT1EP04732 61 aa2.86□□□□□ -1.95
TNPO3-201ENST00000265388 KRTAP19-4Q3LI73 84 aa2.82□□□□□ -1.96
TNPO3-201ENST00000265388 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 522.5 ms