RNA–Protein interactions for RNA: ENST00000265362.8

SEMA3A-201, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA3A, Length 8,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-201ENST00000265362 VPS13DQ5THJ4 4388 aa2.88□□□□□ -1.95
SEMA3A-201ENST00000265362 DNAH2Q9P225 4427 aa2.87□□□□□ -1.95
SEMA3A-201ENST00000265362 KRTAP10-6P60371 365 aaPredicted RBP2.85□□□□□ -1.95
SEMA3A-201ENST00000265362 DNAH10Q8IVF4 4471 aa2.85□□□□□ -1.95
SEMA3A-201ENST00000265362 KRTAP12-1P59990 96 aa2.85□□□□□ -1.95
SEMA3A-201ENST00000265362 KRTAP13-4Q3LI77 160 aa2.83□□□□□ -1.96
SEMA3A-201ENST00000265362 PLECQ15149 4684 aaKnown RBP2.83□□□□□ -1.96
SEMA3A-201ENST00000265362 KRTAP10-10P60014 251 aa2.83□□□□□ -1.96
SEMA3A-201ENST00000265362 DYNC2H1Q8NCM8 4307 aaKnown RBP2.83□□□□□ -1.96
SEMA3A-201ENST00000265362 KRTAP12-2P59991 146 aa2.82□□□□□ -1.96
SEMA3A-201ENST00000265362 STARD9Q9P2P6 4700 aa2.81□□□□□ -1.96
SEMA3A-201ENST00000265362 C10orf95Q9H7T3 257 aa2.8□□□□□ -1.96
SEMA3A-201ENST00000265362 KRTAP3-3Q9BYR6 98 aa2.8□□□□□ -1.96
SEMA3A-201ENST00000265362 FAT2Q9NYQ8 4349 aa2.78□□□□□ -1.96
SEMA3A-201ENST00000265362 KRTAP17-1Q9BYP8 105 aa2.77□□□□□ -1.97
SEMA3A-201ENST00000265362 KRTAP3-2Q9BYR7 98 aa2.77□□□□□ -1.97
SEMA3A-201ENST00000265362 DNAH11Q96DT5 4516 aa2.76□□□□□ -1.97
SEMA3A-201ENST00000265362 DNAH17Q9UFH2 4485 aa2.75□□□□□ -1.97
SEMA3A-201ENST00000265362 PKHD1P08F94 4074 aa2.74□□□□□ -1.97
SEMA3A-201ENST00000265362 KRTAP23-1A1A580 65 aa2.73□□□□□ -1.97
SEMA3A-201ENST00000265362 DNAH5Q8TE73 4624 aa2.69□□□□□ -1.98
SEMA3A-201ENST00000265362 LRP1BQ9NZR2 4599 aa2.66□□□□□ -1.98
SEMA3A-201ENST00000265362 KRTAP4-5Q9BYR2 181 aa2.65□□□□□ -1.99
SEMA3A-201ENST00000265362 DNAH8Q96JB1 4490 aa2.61□□□□□ -1.99
SEMA3A-201ENST00000265362 PKD1P98161 4303 aa2.59□□□□□ -1.99
SEMA3A-201ENST00000265362 DNHD1Q96M86 4753 aa2.59□□□□□ -2
SEMA3A-201ENST00000265362 KRTAP15-1Q3LI76 137 aa2.58□□□□□ -2
SEMA3A-201ENST00000265362 KRTAP10-12P60413 245 aa2.55□□□□□ -2
SEMA3A-201ENST00000265362 FAT1Q14517 4588 aa2.54□□□□□ -2
SEMA3A-201ENST00000265362 FLGP20930 4061 aaPredicted RBP2.54□□□□□ -2
SEMA3A-201ENST00000265362 SPRR2GQ9BYE4 73 aa2.53□□□□□ -2
SEMA3A-201ENST00000265362 DYNC1H1Q14204 4646 aaKnown RBP2.53□□□□□ -2
SEMA3A-201ENST00000265362 INE1O15225 51 aa2.51□□□□□ -2.01
SEMA3A-201ENST00000265362 APOBP04114 4563 aaKnown RBP2.5□□□□□ -2.01
SEMA3A-201ENST00000265362 KRTAP4-1Q9BYQ7 146 aa2.49□□□□□ -2.01
SEMA3A-201ENST00000265362 TNXBP22105 4242 aa2.48□□□□□ -2.01
SEMA3A-201ENST00000265362 PKHD1L1Q86WI1 4243 aa2.48□□□□□ -2.01
SEMA3A-201ENST00000265362 SACSQ9NZJ4 4579 aa2.48□□□□□ -2.01
SEMA3A-201ENST00000265362 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
SEMA3A-201ENST00000265362 LORP23490 312 aaPredicted RBP2.47□□□□□ -2.01
SEMA3A-201ENST00000265362 LRP1Q07954 4544 aaKnown RBP2.47□□□□□ -2.01
SEMA3A-201ENST00000265362 MYCBP2O75592 4640 aa2.47□□□□□ -2.01
SEMA3A-201ENST00000265362 HSPG2P98160 4391 aa2.47□□□□□ -2.01
SEMA3A-201ENST00000265362 KRTAP19-4Q3LI73 84 aa2.45□□□□□ -2.02
SEMA3A-201ENST00000265362 FAT3Q8TDW7 4589 aa2.45□□□□□ -2.02
SEMA3A-201ENST00000265362 MT1HP80294 61 aa2.44□□□□□ -2.02
SEMA3A-201ENST00000265362 RYR1P21817 5038 aa2.42□□□□□ -2.02
SEMA3A-201ENST00000265362 LCE3AQ5TA76 89 aa2.41□□□□□ -2.02
SEMA3A-201ENST00000265362 MT2AP02795 61 aa2.4□□□□□ -2.03
SEMA3A-201ENST00000265362 KRTAP19-8Q3LI54 63 aa2.37□□□□□ -2.03
SEMA3A-201ENST00000265362 LRP2P98164 4655 aa2.36□□□□□ -2.03
SEMA3A-201ENST00000265362 KRTAP8-1Q8IUC2 63 aa2.35□□□□□ -2.03
SEMA3A-201ENST00000265362 MT1FP04733 61 aa2.34□□□□□ -2.03
SEMA3A-201ENST00000265362 KRTAP19-1Q8IUB9 90 aa2.34□□□□□ -2.04
SEMA3A-201ENST00000265362 RYR3Q15413 4870 aa2.34□□□□□ -2.04
SEMA3A-201ENST00000265362 HYDINQ4G0P3 5121 aa2.33□□□□□ -2.04
SEMA3A-201ENST00000265362 KRTAP9-8Q9BYQ0 159 aa2.27□□□□□ -2.05
SEMA3A-201ENST00000265362 RYR2Q92736 4967 aa2.27□□□□□ -2.05
SEMA3A-201ENST00000265362 LCE2CQ5TA81 110 aa2.27□□□□□ -2.05
SEMA3A-201ENST00000265362 KIAA1109Q2LD37 5005 aa2.26□□□□□ -2.05
SEMA3A-201ENST00000265362 KMT2CQ8NEZ4 4911 aaKnown RBP2.26□□□□□ -2.05
SEMA3A-201ENST00000265362 KRTAP19-2Q3LHN2 52 aa2.25□□□□□ -2.05
SEMA3A-201ENST00000265362 LCE3CQ5T5A8 94 aa2.23□□□□□ -2.05
SEMA3A-201ENST00000265362 MT1XP80297 61 aa2.22□□□□□ -2.05
SEMA3A-201ENST00000265362 LPAP08519 4548 aa2.22□□□□□ -2.05
SEMA3A-201ENST00000265362 KRTAP10-5P60370 271 aa2.22□□□□□ -2.05
SEMA3A-201ENST00000265362 SPRR5A0A1B0GTR4 108 aa2.21□□□□□ -2.06
SEMA3A-201ENST00000265362 KRTAP19-5Q3LI72 72 aa2.2□□□□□ -2.06
SEMA3A-201ENST00000265362 MT1BP07438 61 aa2.2□□□□□ -2.06
SEMA3A-201ENST00000265362 KRTAP9-3Q9BYQ3 159 aa2.19□□□□□ -2.06
SEMA3A-201ENST00000265362 HERC2O95714 4834 aa2.18□□□□□ -2.06
SEMA3A-201ENST00000265362 MUC17Q685J3 4493 aa2.16□□□□□ -2.06
SEMA3A-201ENST00000265362 KRTAP10-7P60409 375 aaPredicted RBP2.16□□□□□ -2.06
SEMA3A-201ENST00000265362 CRCT1Q9UGL9 99 aa2.12□□□□□ -2.07
SEMA3A-201ENST00000265362 SPRR2FQ96RM1 72 aa2.1□□□□□ -2.07
SEMA3A-201ENST00000265362 MT1GP13640 62 aa2.07□□□□□ -2.08
SEMA3A-201ENST00000265362 PCLOQ9Y6V0 5065 aa2.06□□□□□ -2.08
SEMA3A-201ENST00000265362 LCE2BO14633 110 aa2.05□□□□□ -2.08
SEMA3A-201ENST00000265362 MT1LQ93083 61 aa2.03□□□□□ -2.08
SEMA3A-201ENST00000265362 LCE2AQ5TA79 106 aaPredicted RBP2.03□□□□□ -2.08
SEMA3A-201ENST00000265362 KRTAP19-6Q3LI70 58 aa2.03□□□□□ -2.09
SEMA3A-201ENST00000265362 HERC1Q15751 4861 aa2□□□□□ -2.09
SEMA3A-201ENST00000265362 MT1EP04732 61 aa1.99□□□□□ -2.09
SEMA3A-201ENST00000265362 KRTAP19-3Q7Z4W3 81 aa1.99□□□□□ -2.09
SEMA3A-201ENST00000265362 BIRC6Q9NR09 4857 aa1.99□□□□□ -2.09
SEMA3A-201ENST00000265362 KRTAP4-8A0A0G2JLE6 195 aa1.99□□□□□ -2.09
SEMA3A-201ENST00000265362 KRTAP4-8Q9BYQ9 185 aa1.99□□□□□ -2.09
SEMA3A-201ENST00000265362 LCE2DQ5TA82 110 aaPredicted RBP1.96□□□□□ -2.1
SEMA3A-201ENST00000265362 HMCN2Q8NDA2 5059 aa1.96□□□□□ -2.1
SEMA3A-201ENST00000265362 SPRR2EP22531 72 aa1.94□□□□□ -2.1
SEMA3A-201ENST00000265362 SPRR2BP35325 72 aa1.94□□□□□ -2.1
SEMA3A-201ENST00000265362 SPRR2AP35326 72 aa1.94□□□□□ -2.1
SEMA3A-201ENST00000265362 KRTAP12-4P60329 112 aa1.93□□□□□ -2.1
SEMA3A-201ENST00000265362 EPPK1P58107 5090 aaKnown RBP1.92□□□□□ -2.1
SEMA3A-201ENST00000265362 MUC2Q02817 5179 aa1.92□□□□□ -2.1
SEMA3A-201ENST00000265362 KRTAP19-7Q3SYF9 63 aa1.91□□□□□ -2.1
SEMA3A-201ENST00000265362 ABCA13Q86UQ4 5058 aa1.9□□□□□ -2.11
SEMA3A-201ENST00000265362 MT1MQ8N339 61 aa1.89□□□□□ -2.11
SEMA3A-201ENST00000265362 SPRR2DP22532 72 aa1.89□□□□□ -2.11
SEMA3A-201ENST00000265362 LCE3BQ5TA77 95 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms