RNA–Protein interactions for RNA: ENST00000265362.8

SEMA3A-201, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA3A, Length 8,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-201ENST00000265362 NISCHQ9Y2I1 1504 aa11.18□□□□□ -0.62
SEMA3A-201ENST00000265362 DCAF8L2P0C7V8 631 aa10.12□□□□□ -0.79
SEMA3A-201ENST00000265362 SUPT5HO00267 1087 aaKnown RBP9.77□□□□□ -0.85
SEMA3A-201ENST00000265362 SHROOM4Q9ULL8 1493 aa9.73□□□□□ -0.85
SEMA3A-201ENST00000265362 CCDC180Q9P1Z9 1646 aa9.69□□□□□ -0.86
SEMA3A-201ENST00000265362 ZCCHC6Q5VYS8 1495 aaKnown RBP9.33□□□□□ -0.92
SEMA3A-201ENST00000265362 TRIM41Q8WV44 630 aa9.25□□□□□ -0.93
SEMA3A-201ENST00000265362 APLP2Q06481 763 aa9.22□□□□□ -0.93
SEMA3A-201ENST00000265362 ZEB1P37275 1124 aaPredicted RBP9.18□□□□□ -0.94
SEMA3A-201ENST00000265362 DCAF1Q9Y4B6 1507 aa9.17□□□□□ -0.94
SEMA3A-201ENST00000265362 FAM9AQ8IZU1 332 aaPredicted RBP9.13□□□□□ -0.95
SEMA3A-201ENST00000265362 ABCC9O60706 1549 aa9.11□□□□□ -0.95
SEMA3A-201ENST00000265362 NACADO15069 1562 aa9.09□□□□□ -0.95
SEMA3A-201ENST00000265362 CHIC1Q5VXU3 224 aa9.08□□□□□ -0.96
SEMA3A-201ENST00000265362 PCGF6Q9BYE7 350 aa9.07□□□□□ -0.96
SEMA3A-201ENST00000265362 RB1CC1Q8TDY2 1594 aa9.04□□□□□ -0.96
SEMA3A-201ENST00000265362 SCRIBQ14160 1630 aa9.04□□□□□ -0.96
SEMA3A-201ENST00000265362 TRIM26Q12899 539 aaPredicted RBP9□□□□□ -0.97
SEMA3A-201ENST00000265362 UBTFP17480 764 aaKnown RBP8.99□□□□□ -0.97
SEMA3A-201ENST00000265362 MYO15BQ96JP2 1530 aa8.99□□□□□ -0.97
SEMA3A-201ENST00000265362 EHMT2Q96KQ7 1210 aa8.98□□□□□ -0.97
SEMA3A-201ENST00000265362 PELP1Q8IZL8 1130 aaKnown RBP8.96□□□□□ -0.98
SEMA3A-201ENST00000265362 CCER1Q8TC90 406 aaPredicted RBP8.89□□□□□ -0.99
SEMA3A-201ENST00000265362 HRCP23327 699 aa8.83□□□□□ -1
SEMA3A-201ENST00000265362 CENPBP07199 599 aaPredicted RBP8.83□□□□□ -1
SEMA3A-201ENST00000265362 BAZ1AQ9NRL2 1556 aaPredicted RBP8.82□□□□□ -1
SEMA3A-201ENST00000265362 LOC105371045A0A1W2PR82 267 aa8.8□□□□□ -1
SEMA3A-201ENST00000265362 RSF1Q96T23 1441 aaPredicted RBP8.75□□□□□ -1.01
SEMA3A-201ENST00000265362 PABPN1Q86U42 306 aaKnown RBP eCLIP8.75□□□□□ -1.01
SEMA3A-201ENST00000265362 EEA1Q15075 1411 aa8.73□□□□□ -1.01
SEMA3A-201ENST00000265362 TTBK1Q5TCY1 1321 aaPredicted RBP8.71□□□□□ -1.01
SEMA3A-201ENST00000265362 RANGAP1P46060 587 aaPredicted RBP8.71□□□□□ -1.02
SEMA3A-201ENST00000265362 ATP1B4Q9UN42 357 aaPredicted RBP8.7□□□□□ -1.02
SEMA3A-201ENST00000265362 CSRNP3Q8WYN3 585 aa8.67□□□□□ -1.02
SEMA3A-201ENST00000265362 SMARCA2P51531 1590 aa8.63□□□□□ -1.03
SEMA3A-201ENST00000265362 BAZ1BQ9UIG0 1483 aaKnown RBP8.62□□□□□ -1.03
SEMA3A-201ENST00000265362 PPARGC1BQ86YN6 1023 aaKnown RBP8.57□□□□□ -1.04
SEMA3A-201ENST00000265362 TOP2AP11388 1531 aaKnown RBP8.56□□□□□ -1.04
SEMA3A-201ENST00000265362 SMARCA4P51532 1647 aa8.56□□□□□ -1.04
SEMA3A-201ENST00000265362 WIZO95785 1651 aa8.56□□□□□ -1.04
SEMA3A-201ENST00000265362 GOLGA3Q08378 1498 aa8.54□□□□□ -1.04
SEMA3A-201ENST00000265362 MROH2BQ7Z745 1585 aa8.54□□□□□ -1.04
SEMA3A-201ENST00000265362 WRNQ14191 1432 aaPredicted RBP eCLIP8.54□□□□□ -1.04
SEMA3A-201ENST00000265362 HNRNPUL2Q1KMD3 747 aaKnown RBP8.53□□□□□ -1.04
SEMA3A-201ENST00000265362 CECR2Q9BXF3 1484 aa8.53□□□□□ -1.04
SEMA3A-201ENST00000265362 NEFLP07196 543 aa8.52□□□□□ -1.04
SEMA3A-201ENST00000265362 CEP164Q9UPV0 1460 aa8.52□□□□□ -1.05
SEMA3A-201ENST00000265362 ACIN1Q9UKV3 1341 aaKnown RBP8.49□□□□□ -1.05
SEMA3A-201ENST00000265362 DIEXFQ68CQ4 756 aaKnown RBP8.48□□□□□ -1.05
SEMA3A-201ENST00000265362 KIF27Q86VH2 1401 aa8.48□□□□□ -1.05
SEMA3A-201ENST00000265362 TNIKQ9UKE5 1360 aa8.48□□□□□ -1.05
SEMA3A-201ENST00000265362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.48□□□□□ -1.05
SEMA3A-201ENST00000265362 CLIP1P30622 1438 aa8.47□□□□□ -1.05
SEMA3A-201ENST00000265362 ITGAEP38570 1179 aa8.46□□□□□ -1.05
SEMA3A-201ENST00000265362 MYT1Q01538 1121 aa8.46□□□□□ -1.06
SEMA3A-201ENST00000265362 CCDC88BA6NC98 1476 aa8.45□□□□□ -1.06
SEMA3A-201ENST00000265362 CDK11AQ9UQ88 783 aaPredicted RBP8.45□□□□□ -1.06
SEMA3A-201ENST00000265362 CEP162Q5TB80 1403 aa8.44□□□□□ -1.06
SEMA3A-201ENST00000265362 FAM50AQ14320 339 aaKnown RBP8.44□□□□□ -1.06
SEMA3A-201ENST00000265362 UNC13AQ9UPW8 1703 aa8.43□□□□□ -1.06
SEMA3A-201ENST00000265362 ZNF316A6NFI3 1004 aaPredicted RBP8.39□□□□□ -1.07
SEMA3A-201ENST00000265362 CLSPNQ9HAW4 1339 aa8.38□□□□□ -1.07
SEMA3A-201ENST00000265362 FHAD1B1AJZ9 1412 aa8.37□□□□□ -1.07
SEMA3A-201ENST00000265362 ABCC8Q09428 1581 aa8.35□□□□□ -1.07
SEMA3A-201ENST00000265362 ATAD2BQ9ULI0 1458 aa8.35□□□□□ -1.07
SEMA3A-201ENST00000265362 YTHDC1Q96MU7 727 aaKnown RBP8.35□□□□□ -1.07
SEMA3A-201ENST00000265362 ERICH6Q7L0X2 663 aa8.31□□□□□ -1.08
SEMA3A-201ENST00000265362 TRIM52Q96A61 297 aa8.31□□□□□ -1.08
SEMA3A-201ENST00000265362 MTUS2Q5JR59 1369 aa8.31□□□□□ -1.08
SEMA3A-201ENST00000265362 VPS8Q8N3P4 1428 aa8.3□□□□□ -1.08
SEMA3A-201ENST00000265362 ANP32CO43423 234 aa8.29□□□□□ -1.08
SEMA3A-201ENST00000265362 MYT1LQ9UL68 1186 aa8.29□□□□□ -1.08
SEMA3A-201ENST00000265362 PDS5BQ9NTI5 1447 aa8.29□□□□□ -1.08
SEMA3A-201ENST00000265362 TONSLQ96HA7 1378 aa8.27□□□□□ -1.09
SEMA3A-201ENST00000265362 FBLN2P98095 1184 aa8.26□□□□□ -1.09
SEMA3A-201ENST00000265362 SOGA1O94964 1423 aa8.26□□□□□ -1.09
SEMA3A-201ENST00000265362 HMGXB3Q12766 1538 aa8.26□□□□□ -1.09
SEMA3A-201ENST00000265362 CUX2O14529 1486 aa8.26□□□□□ -1.09
SEMA3A-201ENST00000265362 KIF21BO75037 1637 aa8.26□□□□□ -1.09
SEMA3A-201ENST00000265362 NEUROD1Q13562 356 aa8.25□□□□□ -1.09
SEMA3A-201ENST00000265362 P3H3Q8IVL6 736 aa8.25□□□□□ -1.09
SEMA3A-201ENST00000265362 EIF4G1Q04637 1599 aaKnown RBP8.25□□□□□ -1.09
SEMA3A-201ENST00000265362 PEG3Q9GZU2 1588 aa8.25□□□□□ -1.09
SEMA3A-201ENST00000265362 CARMIL1Q5VZK9 1371 aa8.25□□□□□ -1.09
SEMA3A-201ENST00000265362 CADPSQ9ULU8 1353 aa8.24□□□□□ -1.09
SEMA3A-201ENST00000265362 NCAPD3P42695 1498 aa8.24□□□□□ -1.09
SEMA3A-201ENST00000265362 FMN1Q68DA7 1419 aa8.22□□□□□ -1.09
SEMA3A-201ENST00000265362 CHMP7Q8WUX9 453 aaPredicted RBP8.21□□□□□ -1.09
SEMA3A-201ENST00000265362 CCNB3Q8WWL7 1395 aa8.21□□□□□ -1.1
SEMA3A-201ENST00000265362 ERICH3Q5RHP9 1530 aa8.21□□□□□ -1.1
SEMA3A-201ENST00000265362 TIMELESSQ9UNS1 1208 aa8.21□□□□□ -1.1
SEMA3A-201ENST00000265362 ERCC6Q03468 1493 aa8.2□□□□□ -1.1
SEMA3A-201ENST00000265362 TOP2BQ02880 1626 aa8.19□□□□□ -1.1
SEMA3A-201ENST00000265362 RAPGEF2Q9Y4G8 1499 aa8.19□□□□□ -1.1
SEMA3A-201ENST00000265362 PRDM2Q13029 1718 aa8.19□□□□□ -1.1
SEMA3A-201ENST00000265362 POLR3GLQ9BT43 218 aa8.18□□□□□ -1.1
SEMA3A-201ENST00000265362 BICRAQ9NZM4 1560 aa8.17□□□□□ -1.1
SEMA3A-201ENST00000265362 TSPY4P0CV99 314 aa8.17□□□□□ -1.1
SEMA3A-201ENST00000265362 TSPY10P0CW01 314 aa8.17□□□□□ -1.1
SEMA3A-201ENST00000265362 ARHGAP35Q9NRY4 1499 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms