RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 DNAH7Q8WXX0 4024 aa8.43□□□□□ -1.06
SRF-201ENST00000265354 DNAH5Q8TE73 4624 aa8.42□□□□□ -1.06
SRF-201ENST00000265354 DNAH17Q9UFH2 4485 aa8.4□□□□□ -1.06
SRF-201ENST00000265354 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.06
SRF-201ENST00000265354 MYCBP2O75592 4640 aa8.38□□□□□ -1.07
SRF-201ENST00000265354 PRKDCP78527 4128 aaKnown RBP8.37□□□□□ -1.07
SRF-201ENST00000265354 KRTAP3-2Q9BYR7 98 aa8.37□□□□□ -1.07
SRF-201ENST00000265354 A0A1B0GVY2 172 aa8.36□□□□□ -1.07
SRF-201ENST00000265354 CMYA5Q8N3K9 4069 aa8.32□□□□□ -1.08
SRF-201ENST00000265354 DNAH2Q9P225 4427 aa8.3□□□□□ -1.08
SRF-201ENST00000265354 VPS13DQ5THJ4 4388 aa8.3□□□□□ -1.08
SRF-201ENST00000265354 TNP1P09430 55 aa8.29□□□□□ -1.08
SRF-201ENST00000265354 DNAH6Q9C0G6 4158 aa8.27□□□□□ -1.09
SRF-201ENST00000265354 PP632Q6XCG6 107 aa8.25□□□□□ -1.09
SRF-201ENST00000265354 VPS13BQ7Z7G8 4022 aa8.2□□□□□ -1.1
SRF-201ENST00000265354 KRTAP10-4P60372 401 aaPredicted RBP8.15□□□□□ -1.1
SRF-201ENST00000265354 ALMS1Q8TCU4 4167 aa8.12□□□□□ -1.11
SRF-201ENST00000265354 HECTD4Q9Y4D8 3996 aa8.1□□□□□ -1.11
SRF-201ENST00000265354 DNAH3Q8TD57 4116 aa8.09□□□□□ -1.11
SRF-201ENST00000265354 DYNC1H1Q14204 4646 aaKnown RBP8.08□□□□□ -1.12
SRF-201ENST00000265354 FAT3Q8TDW7 4589 aa8.05□□□□□ -1.12
SRF-201ENST00000265354 LRP1Q07954 4544 aaKnown RBP7.99□□□□□ -1.13
SRF-201ENST00000265354 APOBP04114 4563 aaKnown RBP7.95□□□□□ -1.14
SRF-201ENST00000265354 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
SRF-201ENST00000265354 LORP23490 312 aaPredicted RBP7.93□□□□□ -1.14
SRF-201ENST00000265354 KRTAP10-10P60014 251 aa7.92□□□□□ -1.14
SRF-201ENST00000265354 SACSQ9NZJ4 4579 aa7.9□□□□□ -1.14
SRF-201ENST00000265354 DYNC2H1Q8NCM8 4307 aaKnown RBP7.89□□□□□ -1.15
SRF-201ENST00000265354 HYDINQ4G0P3 5121 aa7.89□□□□□ -1.15
SRF-201ENST00000265354 PKHD1P08F94 4074 aa7.87□□□□□ -1.15
SRF-201ENST00000265354 RYR1P21817 5038 aa7.83□□□□□ -1.16
SRF-201ENST00000265354 KIAA1109Q2LD37 5005 aa7.8□□□□□ -1.16
SRF-201ENST00000265354 KRTAP4-5Q9BYR2 181 aa7.78□□□□□ -1.16
SRF-201ENST00000265354 PRO2289Q9P1D8 64 aa7.73□□□□□ -1.17
SRF-201ENST00000265354 LRP2P98164 4655 aa7.69□□□□□ -1.18
SRF-201ENST00000265354 FAT2Q9NYQ8 4349 aa7.64□□□□□ -1.19
SRF-201ENST00000265354 RYR3Q15413 4870 aa7.54□□□□□ -1.2
SRF-201ENST00000265354 INE1O15225 51 aa7.51□□□□□ -1.21
SRF-201ENST00000265354 KRTAP4-1Q9BYQ7 146 aa7.49□□□□□ -1.21
SRF-201ENST00000265354 HSPG2P98160 4391 aa7.49□□□□□ -1.21
SRF-201ENST00000265354 KRTAP17-1Q9BYP8 105 aa7.47□□□□□ -1.21
SRF-201ENST00000265354 KMT2CQ8NEZ4 4911 aaKnown RBP7.46□□□□□ -1.21
SRF-201ENST00000265354 PKD1P98161 4303 aa7.38□□□□□ -1.23
SRF-201ENST00000265354 LPAP08519 4548 aa7.34□□□□□ -1.23
SRF-201ENST00000265354 LCE3AQ5TA76 89 aa7.25□□□□□ -1.25
SRF-201ENST00000265354 RYR2Q92736 4967 aa7.18□□□□□ -1.26
SRF-201ENST00000265354 EPPK1P58107 5090 aaKnown RBP7.13□□□□□ -1.27
SRF-201ENST00000265354 PKHD1L1Q86WI1 4243 aa7.08□□□□□ -1.28
SRF-201ENST00000265354 MUC2Q02817 5179 aa7.07□□□□□ -1.28
SRF-201ENST00000265354 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
SRF-201ENST00000265354 KRTAP10-12P60413 245 aa7.03□□□□□ -1.28
SRF-201ENST00000265354 HERC2O95714 4834 aa7.01□□□□□ -1.29
SRF-201ENST00000265354 TNXBP22105 4242 aa6.95□□□□□ -1.3
SRF-201ENST00000265354 ABCA13Q86UQ4 5058 aa6.94□□□□□ -1.3
SRF-201ENST00000265354 KRTAP23-1A1A580 65 aa6.92□□□□□ -1.3
SRF-201ENST00000265354 FAT4Q6V0I7 4981 aa6.79□□□□□ -1.32
SRF-201ENST00000265354 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
SRF-201ENST00000265354 SPRR2GQ9BYE4 73 aa6.77□□□□□ -1.33
SRF-201ENST00000265354 MT1FP04733 61 aa6.76□□□□□ -1.33
SRF-201ENST00000265354 MT2AP02795 61 aa6.74□□□□□ -1.33
SRF-201ENST00000265354 KRTAP19-1Q8IUB9 90 aa6.74□□□□□ -1.33
SRF-201ENST00000265354 MT1HP80294 61 aa6.73□□□□□ -1.33
SRF-201ENST00000265354 RNF213Q63HN8 5207 aa6.71□□□□□ -1.34
SRF-201ENST00000265354 PCLOQ9Y6V0 5065 aa6.69□□□□□ -1.34
SRF-201ENST00000265354 MUC17Q685J3 4493 aa6.6□□□□□ -1.35
SRF-201ENST00000265354 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.35
SRF-201ENST00000265354 UBR4Q5T4S7 5183 aa6.57□□□□□ -1.36
SRF-201ENST00000265354 KRTAP19-2Q3LHN2 52 aa6.57□□□□□ -1.36
SRF-201ENST00000265354 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
SRF-201ENST00000265354 HERC1Q15751 4861 aa6.55□□□□□ -1.36
SRF-201ENST00000265354 KRTAP10-7P60409 375 aaPredicted RBP6.53□□□□□ -1.36
SRF-201ENST00000265354 KRTAP10-5P60370 271 aa6.48□□□□□ -1.37
SRF-201ENST00000265354 KRTAP19-5Q3LI72 72 aa6.48□□□□□ -1.37
SRF-201ENST00000265354 FSIP2Q5CZC0 6907 aa6.46□□□□□ -1.37
SRF-201ENST00000265354 FLGP20930 4061 aaPredicted RBP6.45□□□□□ -1.38
SRF-201ENST00000265354 LCE2CQ5TA81 110 aa6.45□□□□□ -1.38
SRF-201ENST00000265354 OBSCNQ5VST9 7968 aa6.42□□□□□ -1.38
SRF-201ENST00000265354 MT1XP80297 61 aa6.41□□□□□ -1.38
SRF-201ENST00000265354 HMCN2Q8NDA2 5059 aa6.41□□□□□ -1.38
SRF-201ENST00000265354 MT1BP07438 61 aa6.35□□□□□ -1.39
SRF-201ENST00000265354 BIRC6Q9NR09 4857 aa6.34□□□□□ -1.39
SRF-201ENST00000265354 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.39
SRF-201ENST00000265354 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
SRF-201ENST00000265354 SYNE1Q8NF91 8797 aaKnown RBP6.32□□□□□ -1.4
SRF-201ENST00000265354 KRTAP4-8A0A0G2JLE6 195 aa6.3□□□□□ -1.4
SRF-201ENST00000265354 KRTAP4-8Q9BYQ9 185 aa6.3□□□□□ -1.4
SRF-201ENST00000265354 KRTAP19-8Q3LI54 63 aa6.27□□□□□ -1.41
SRF-201ENST00000265354 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
SRF-201ENST00000265354 USH2AO75445 5202 aa6.12□□□□□ -1.43
SRF-201ENST00000265354 KMT2DO14686 5537 aa6.1□□□□□ -1.43
SRF-201ENST00000265354 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
SRF-201ENST00000265354 DSTQ03001 7570 aaKnown RBP6.04□□□□□ -1.44
SRF-201ENST00000265354 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
SRF-201ENST00000265354 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.46
SRF-201ENST00000265354 SPRR2FQ96RM1 72 aa5.96□□□□□ -1.46
SRF-201ENST00000265354 LCE2BO14633 110 aa5.92□□□□□ -1.46
SRF-201ENST00000265354 MT1GP13640 62 aa5.85□□□□□ -1.47
SRF-201ENST00000265354 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
SRF-201ENST00000265354 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
SRF-201ENST00000265354 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms