RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 APOBP04114 4563 aaKnown RBP4.11□□□□□ -1.75
GTF3C3-201ENST00000263956 KRTAP10-10P60014 251 aa4.1□□□□□ -1.75
GTF3C3-201ENST00000263956 SVIPQ8NHG7 77 aa4.1□□□□□ -1.75
GTF3C3-201ENST00000263956 Q5VV11 94 aa4.09□□□□□ -1.75
GTF3C3-201ENST00000263956 LYSTQ99698 3801 aa4.09□□□□□ -1.76
GTF3C3-201ENST00000263956 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
GTF3C3-201ENST00000263956 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
GTF3C3-201ENST00000263956 KRTAP3-1Q9BYR8 98 aa4.05□□□□□ -1.76
GTF3C3-201ENST00000263956 HECTD4Q9Y4D8 3996 aa4.03□□□□□ -1.76
GTF3C3-201ENST00000263956 HERC2O95714 4834 aa4.03□□□□□ -1.76
GTF3C3-201ENST00000263956 CRIPTQ9P021 101 aa4.03□□□□□ -1.76
GTF3C3-201ENST00000263956 PKD1P98161 4303 aa4.02□□□□□ -1.77
GTF3C3-201ENST00000263956 VPS13BQ7Z7G8 4022 aa4.02□□□□□ -1.77
GTF3C3-201ENST00000263956 HSPG2P98160 4391 aa4.02□□□□□ -1.77
GTF3C3-201ENST00000263956 PKHD1P08F94 4074 aa4□□□□□ -1.77
GTF3C3-201ENST00000263956 EPPK1P58107 5090 aaKnown RBP3.99□□□□□ -1.77
GTF3C3-201ENST00000263956 P0C880 135 aa3.98□□□□□ -1.77
GTF3C3-201ENST00000263956 A8MU10 97 aa3.97□□□□□ -1.77
GTF3C3-201ENST00000263956 LRP1Q07954 4544 aaKnown RBP3.96□□□□□ -1.78
GTF3C3-201ENST00000263956 H0YAA0 97 aa3.96□□□□□ -1.78
GTF3C3-201ENST00000263956 KRTAP4-1Q9BYQ7 146 aa3.95□□□□□ -1.78
GTF3C3-201ENST00000263956 FRAS1Q86XX4 4008 aa3.92□□□□□ -1.78
GTF3C3-201ENST00000263956 ROMO1P60602 79 aa3.88□□□□□ -1.79
GTF3C3-201ENST00000263956 MYCBP2O75592 4640 aa3.87□□□□□ -1.79
GTF3C3-201ENST00000263956 KRTAP3-3Q9BYR6 98 aa3.86□□□□□ -1.79
GTF3C3-201ENST00000263956 PRO2289Q9P1D8 64 aa3.85□□□□□ -1.79
GTF3C3-201ENST00000263956 ABCA13Q86UQ4 5058 aa3.85□□□□□ -1.79
GTF3C3-201ENST00000263956 FAT3Q8TDW7 4589 aa3.84□□□□□ -1.79
GTF3C3-201ENST00000263956 TNP1P09430 55 aa3.81□□□□□ -1.8
GTF3C3-201ENST00000263956 MT1HP80294 61 aa3.81□□□□□ -1.8
GTF3C3-201ENST00000263956 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
GTF3C3-201ENST00000263956 KRTAP10-6P60371 365 aaPredicted RBP3.81□□□□□ -1.8
GTF3C3-201ENST00000263956 PCLOQ9Y6V0 5065 aa3.78□□□□□ -1.8
GTF3C3-201ENST00000263956 HERC1Q15751 4861 aa3.77□□□□□ -1.81
GTF3C3-201ENST00000263956 KRTAP3-2Q9BYR7 98 aa3.76□□□□□ -1.81
GTF3C3-201ENST00000263956 A6NN06 94 aa3.73□□□□□ -1.81
GTF3C3-201ENST00000263956 KRTAP13-4Q3LI77 160 aa3.71□□□□□ -1.82
GTF3C3-201ENST00000263956 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
GTF3C3-201ENST00000263956 LRP2P98164 4655 aa3.71□□□□□ -1.82
GTF3C3-201ENST00000263956 PKHD1L1Q86WI1 4243 aa3.71□□□□□ -1.82
GTF3C3-201ENST00000263956 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
GTF3C3-201ENST00000263956 TNXBP22105 4242 aa3.7□□□□□ -1.82
GTF3C3-201ENST00000263956 KRTAP12-2P59991 146 aa3.69□□□□□ -1.82
GTF3C3-201ENST00000263956 MT2AP02795 61 aa3.69□□□□□ -1.82
GTF3C3-201ENST00000263956 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
GTF3C3-201ENST00000263956 LORP23490 312 aaPredicted RBP3.65□□□□□ -1.82
GTF3C3-201ENST00000263956 LCE2CQ5TA81 110 aa3.64□□□□□ -1.83
GTF3C3-201ENST00000263956 PP632Q6XCG6 107 aa3.63□□□□□ -1.83
GTF3C3-201ENST00000263956 MT1FP04733 61 aa3.62□□□□□ -1.83
GTF3C3-201ENST00000263956 LPAP08519 4548 aa3.61□□□□□ -1.83
GTF3C3-201ENST00000263956 KRTAP19-2Q3LHN2 52 aa3.58□□□□□ -1.84
GTF3C3-201ENST00000263956 SPRR2GQ9BYE4 73 aa3.57□□□□□ -1.84
GTF3C3-201ENST00000263956 HMCN2Q8NDA2 5059 aa3.57□□□□□ -1.84
GTF3C3-201ENST00000263956 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
GTF3C3-201ENST00000263956 C10orf95Q9H7T3 257 aa3.54□□□□□ -1.84
GTF3C3-201ENST00000263956 KRTAP9-8Q9BYQ0 159 aa3.53□□□□□ -1.84
GTF3C3-201ENST00000263956 RNF213Q63HN8 5207 aa3.51□□□□□ -1.85
GTF3C3-201ENST00000263956 MUC17Q685J3 4493 aa3.46□□□□□ -1.86
GTF3C3-201ENST00000263956 KRTAP19-1Q8IUB9 90 aa3.46□□□□□ -1.86
GTF3C3-201ENST00000263956 LCE2AQ5TA79 106 aaPredicted RBP3.46□□□□□ -1.86
GTF3C3-201ENST00000263956 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
GTF3C3-201ENST00000263956 KRTAP19-8Q3LI54 63 aa3.44□□□□□ -1.86
GTF3C3-201ENST00000263956 UBR4Q5T4S7 5183 aa3.44□□□□□ -1.86
GTF3C3-201ENST00000263956 KRTAP9-3Q9BYQ3 159 aa3.43□□□□□ -1.86
GTF3C3-201ENST00000263956 FAT4Q6V0I7 4981 aa3.42□□□□□ -1.86
GTF3C3-201ENST00000263956 LCE2DQ5TA82 110 aaPredicted RBP3.41□□□□□ -1.86
GTF3C3-201ENST00000263956 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
GTF3C3-201ENST00000263956 MT1BP07438 61 aa3.36□□□□□ -1.87
GTF3C3-201ENST00000263956 KRTAP8-1Q8IUC2 63 aa3.35□□□□□ -1.87
GTF3C3-201ENST00000263956 LCE2BO14633 110 aa3.32□□□□□ -1.88
GTF3C3-201ENST00000263956 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
GTF3C3-201ENST00000263956 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
GTF3C3-201ENST00000263956 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
GTF3C3-201ENST00000263956 KRTAP9-2Q9BYQ4 174 aa3.31□□□□□ -1.88
GTF3C3-201ENST00000263956 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
GTF3C3-201ENST00000263956 KRTAP15-1Q3LI76 137 aa3.28□□□□□ -1.88
GTF3C3-201ENST00000263956 CRCT1Q9UGL9 99 aa3.28□□□□□ -1.88
GTF3C3-201ENST00000263956 MUC2Q02817 5179 aa3.27□□□□□ -1.89
GTF3C3-201ENST00000263956 MT1XP80297 61 aa3.26□□□□□ -1.89
GTF3C3-201ENST00000263956 KRTAP19-6Q3LI70 58 aa3.2□□□□□ -1.9
GTF3C3-201ENST00000263956 SPRR2FQ96RM1 72 aa3.2□□□□□ -1.9
GTF3C3-201ENST00000263956 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
GTF3C3-201ENST00000263956 KRTAP9-6A0A140TA67 174 aa3.14□□□□□ -1.91
GTF3C3-201ENST00000263956 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
GTF3C3-201ENST00000263956 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
GTF3C3-201ENST00000263956 FSIP2Q5CZC0 6907 aa3.11□□□□□ -1.91
GTF3C3-201ENST00000263956 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
GTF3C3-201ENST00000263956 KRTAP4-8A0A0G2JLE6 195 aa3.08□□□□□ -1.92
GTF3C3-201ENST00000263956 KRTAP4-8Q9BYQ9 185 aa3.08□□□□□ -1.92
GTF3C3-201ENST00000263956 SPRR2EP22531 72 aa3.05□□□□□ -1.92
GTF3C3-201ENST00000263956 SPRR2BP35325 72 aa3.05□□□□□ -1.92
GTF3C3-201ENST00000263956 SPRR2AP35326 72 aa3.05□□□□□ -1.92
GTF3C3-201ENST00000263956 KRTAP19-4Q3LI73 84 aa3.04□□□□□ -1.92
GTF3C3-201ENST00000263956 H3BS24 57 aa3.02□□□□□ -1.93
GTF3C3-201ENST00000263956 USH2AO75445 5202 aa2.96□□□□□ -1.93
GTF3C3-201ENST00000263956 MT1GP13640 62 aa2.95□□□□□ -1.94
GTF3C3-201ENST00000263956 SPRR2DP22532 72 aa2.95□□□□□ -1.94
GTF3C3-201ENST00000263956 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
GTF3C3-201ENST00000263956 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.91□□□□□ -1.94
GTF3C3-201ENST00000263956 MT1EP04732 61 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms