RNA–Protein interactions for RNA: ENST00000263238.6

ACTR3-201, Transcript of ARP3 actin related protein 3 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3, Length 6,718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-201ENST00000263238 MT1HL1P0DM35 61 aa5.74□□□□□ -1.49
ACTR3-201ENST00000263238 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
ACTR3-201ENST00000263238 CRCT1Q9UGL9 99 aa5.73□□□□□ -1.49
ACTR3-201ENST00000263238 DNAH2Q9P225 4427 aa5.69□□□□□ -1.5
ACTR3-201ENST00000263238 KRTAP10-4P60372 401 aaPredicted RBP5.68□□□□□ -1.5
ACTR3-201ENST00000263238 DNAH9Q9NYC9 4486 aa5.68□□□□□ -1.5
ACTR3-201ENST00000263238 DNAH3Q8TD57 4116 aa5.68□□□□□ -1.5
ACTR3-201ENST00000263238 KRTAP12-3P60328 96 aa5.65□□□□□ -1.5
ACTR3-201ENST00000263238 ANK2Q01484 3957 aa5.65□□□□□ -1.51
ACTR3-201ENST00000263238 DNAH8Q96JB1 4490 aa5.63□□□□□ -1.51
ACTR3-201ENST00000263238 PLECQ15149 4684 aaKnown RBP5.56□□□□□ -1.52
ACTR3-201ENST00000263238 KRTAP23-1A1A580 65 aa5.55□□□□□ -1.52
ACTR3-201ENST00000263238 KRTAP4-5Q9BYR2 181 aa5.55□□□□□ -1.52
ACTR3-201ENST00000263238 DNAH11Q96DT5 4516 aa5.49□□□□□ -1.53
ACTR3-201ENST00000263238 DNAH17Q9UFH2 4485 aa5.48□□□□□ -1.53
ACTR3-201ENST00000263238 CMYA5Q8N3K9 4069 aa5.48□□□□□ -1.53
ACTR3-201ENST00000263238 LYSTQ99698 3801 aa5.47□□□□□ -1.53
ACTR3-201ENST00000263238 KMT2AQ03164 3969 aa5.46□□□□□ -1.54
ACTR3-201ENST00000263238 VPS13DQ5THJ4 4388 aa5.41□□□□□ -1.54
ACTR3-201ENST00000263238 VPS13BQ7Z7G8 4022 aa5.41□□□□□ -1.54
ACTR3-201ENST00000263238 DNAH5Q8TE73 4624 aa5.37□□□□□ -1.55
ACTR3-201ENST00000263238 KRTAP10-5P60370 271 aa5.37□□□□□ -1.55
ACTR3-201ENST00000263238 STARD9Q9P2P6 4700 aa5.36□□□□□ -1.55
ACTR3-201ENST00000263238 KRTAP4-1Q9BYQ7 146 aa5.32□□□□□ -1.56
ACTR3-201ENST00000263238 DNAH7Q8WXX0 4024 aa5.27□□□□□ -1.57
ACTR3-201ENST00000263238 HECTD4Q9Y4D8 3996 aa5.26□□□□□ -1.57
ACTR3-201ENST00000263238 DYNC2H1Q8NCM8 4307 aaKnown RBP5.26□□□□□ -1.57
ACTR3-201ENST00000263238 FAT2Q9NYQ8 4349 aa5.24□□□□□ -1.57
ACTR3-201ENST00000263238 DNAH6Q9C0G6 4158 aa5.23□□□□□ -1.57
ACTR3-201ENST00000263238 PRKDCP78527 4128 aaKnown RBP5.22□□□□□ -1.57
ACTR3-201ENST00000263238 LRP1BQ9NZR2 4599 aa5.22□□□□□ -1.57
ACTR3-201ENST00000263238 SACSQ9NZJ4 4579 aa5.19□□□□□ -1.58
ACTR3-201ENST00000263238 FAT1Q14517 4588 aa5.15□□□□□ -1.59
ACTR3-201ENST00000263238 APOBP04114 4563 aaKnown RBP5.12□□□□□ -1.59
ACTR3-201ENST00000263238 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
ACTR3-201ENST00000263238 DYNC1H1Q14204 4646 aaKnown RBP5.05□□□□□ -1.6
ACTR3-201ENST00000263238 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
ACTR3-201ENST00000263238 SPRR2GQ9BYE4 73 aa5.04□□□□□ -1.6
ACTR3-201ENST00000263238 MT1HP80294 61 aa5.04□□□□□ -1.6
ACTR3-201ENST00000263238 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
ACTR3-201ENST00000263238 MT2AP02795 61 aa5□□□□□ -1.61
ACTR3-201ENST00000263238 MT1FP04733 61 aa4.97□□□□□ -1.61
ACTR3-201ENST00000263238 MYCBP2O75592 4640 aa4.89□□□□□ -1.63
ACTR3-201ENST00000263238 KRTAP10-7P60409 375 aaPredicted RBP4.89□□□□□ -1.63
ACTR3-201ENST00000263238 FAT3Q8TDW7 4589 aa4.85□□□□□ -1.63
ACTR3-201ENST00000263238 LRP1Q07954 4544 aaKnown RBP4.82□□□□□ -1.64
ACTR3-201ENST00000263238 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
ACTR3-201ENST00000263238 KRTAP17-1Q9BYP8 105 aa4.76□□□□□ -1.65
ACTR3-201ENST00000263238 PKD1P98161 4303 aa4.76□□□□□ -1.65
ACTR3-201ENST00000263238 LPAP08519 4548 aa4.75□□□□□ -1.65
ACTR3-201ENST00000263238 KRTAP19-1Q8IUB9 90 aa4.74□□□□□ -1.65
ACTR3-201ENST00000263238 PKHD1P08F94 4074 aa4.71□□□□□ -1.66
ACTR3-201ENST00000263238 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
ACTR3-201ENST00000263238 MT1XP80297 61 aa4.7□□□□□ -1.66
ACTR3-201ENST00000263238 KRTAP12-4P60329 112 aa4.69□□□□□ -1.66
ACTR3-201ENST00000263238 PKHD1L1Q86WI1 4243 aa4.69□□□□□ -1.66
ACTR3-201ENST00000263238 RYR1P21817 5038 aa4.68□□□□□ -1.66
ACTR3-201ENST00000263238 DNHD1Q96M86 4753 aa4.67□□□□□ -1.66
ACTR3-201ENST00000263238 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.66
ACTR3-201ENST00000263238 SPRR2FQ96RM1 72 aa4.65□□□□□ -1.66
ACTR3-201ENST00000263238 TNXBP22105 4242 aa4.65□□□□□ -1.67
ACTR3-201ENST00000263238 MT1GP13640 62 aa4.63□□□□□ -1.67
ACTR3-201ENST00000263238 HSPG2P98160 4391 aa4.61□□□□□ -1.67
ACTR3-201ENST00000263238 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.67
ACTR3-201ENST00000263238 KRTAP4-8Q9BYQ9 185 aa4.59□□□□□ -1.67
ACTR3-201ENST00000263238 KRTAP19-8Q3LI54 63 aa4.59□□□□□ -1.68
ACTR3-201ENST00000263238 HYDINQ4G0P3 5121 aa4.58□□□□□ -1.68
ACTR3-201ENST00000263238 MT1BP07438 61 aa4.55□□□□□ -1.68
ACTR3-201ENST00000263238 LRP2P98164 4655 aa4.54□□□□□ -1.68
ACTR3-201ENST00000263238 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
ACTR3-201ENST00000263238 RYR3Q15413 4870 aa4.46□□□□□ -1.7
ACTR3-201ENST00000263238 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
ACTR3-201ENST00000263238 FLGP20930 4061 aaPredicted RBP4.44□□□□□ -1.7
ACTR3-201ENST00000263238 LCE2CQ5TA81 110 aa4.36□□□□□ -1.71
ACTR3-201ENST00000263238 LCE3DQ9BYE3 92 aa4.35□□□□□ -1.71
ACTR3-201ENST00000263238 KMT2CQ8NEZ4 4911 aaKnown RBP4.32□□□□□ -1.72
ACTR3-201ENST00000263238 KRTAP9-3Q9BYQ3 159 aa4.31□□□□□ -1.72
ACTR3-201ENST00000263238 SPRR2EP22531 72 aa4.28□□□□□ -1.72
ACTR3-201ENST00000263238 SPRR2BP35325 72 aa4.28□□□□□ -1.72
ACTR3-201ENST00000263238 SPRR2AP35326 72 aa4.28□□□□□ -1.72
ACTR3-201ENST00000263238 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
ACTR3-201ENST00000263238 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
ACTR3-201ENST00000263238 PRM1P04553 51 aa4.23□□□□□ -1.73
ACTR3-201ENST00000263238 MT1LQ93083 61 aa4.23□□□□□ -1.73
ACTR3-201ENST00000263238 KRTAP19-2Q3LHN2 52 aa4.23□□□□□ -1.73
ACTR3-201ENST00000263238 RYR2Q92736 4967 aa4.22□□□□□ -1.73
ACTR3-201ENST00000263238 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
ACTR3-201ENST00000263238 HERC1Q15751 4861 aa4.15□□□□□ -1.74
ACTR3-201ENST00000263238 MT1EP04732 61 aa4.15□□□□□ -1.75
ACTR3-201ENST00000263238 MUC17Q685J3 4493 aa4.14□□□□□ -1.75
ACTR3-201ENST00000263238 KIAA1109Q2LD37 5005 aa4.13□□□□□ -1.75
ACTR3-201ENST00000263238 LCE2BO14633 110 aa4.13□□□□□ -1.75
ACTR3-201ENST00000263238 HERC2O95714 4834 aa4.12□□□□□ -1.75
ACTR3-201ENST00000263238 SPRR2DP22532 72 aa4.1□□□□□ -1.75
ACTR3-201ENST00000263238 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
ACTR3-201ENST00000263238 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
ACTR3-201ENST00000263238 MT1MQ8N339 61 aa3.99□□□□□ -1.77
ACTR3-201ENST00000263238 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
ACTR3-201ENST00000263238 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
ACTR3-201ENST00000263238 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms