RNA–Protein interactions for RNA: ENST00000261908.10

NEO1-201, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEO1, Length 7,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-201ENST00000261908 FRAS1Q86XX4 4008 aa7.08□□□□□ -1.28
NEO1-201ENST00000261908 MT1HL1P0DM35 61 aa7.04□□□□□ -1.28
NEO1-201ENST00000261908 KRTAP10-5P60370 271 aa7.04□□□□□ -1.28
NEO1-201ENST00000261908 KMT2AQ03164 3969 aa6.91□□□□□ -1.3
NEO1-201ENST00000261908 LYSTQ99698 3801 aa6.88□□□□□ -1.31
NEO1-201ENST00000261908 ALMS1Q8TCU4 4167 aa6.87□□□□□ -1.31
NEO1-201ENST00000261908 DNAH10Q8IVF4 4471 aa6.85□□□□□ -1.31
NEO1-201ENST00000261908 ANK2Q01484 3957 aa6.81□□□□□ -1.32
NEO1-201ENST00000261908 CMYA5Q8N3K9 4069 aa6.78□□□□□ -1.32
NEO1-201ENST00000261908 DNAH9Q9NYC9 4486 aa6.75□□□□□ -1.33
NEO1-201ENST00000261908 DNAH1Q9P2D7 4330 aa6.72□□□□□ -1.33
NEO1-201ENST00000261908 KRTAP8-1Q8IUC2 63 aa6.71□□□□□ -1.33
NEO1-201ENST00000261908 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.33
NEO1-201ENST00000261908 VPS13BQ7Z7G8 4022 aa6.7□□□□□ -1.34
NEO1-201ENST00000261908 KRTAP10-4P60372 401 aaPredicted RBP6.69□□□□□ -1.34
NEO1-201ENST00000261908 DNAH2Q9P225 4427 aa6.65□□□□□ -1.35
NEO1-201ENST00000261908 DNAH3Q8TD57 4116 aa6.54□□□□□ -1.36
NEO1-201ENST00000261908 DNAH7Q8WXX0 4024 aa6.45□□□□□ -1.38
NEO1-201ENST00000261908 PRKDCP78527 4128 aaKnown RBP6.45□□□□□ -1.38
NEO1-201ENST00000261908 DNAH6Q9C0G6 4158 aa6.41□□□□□ -1.38
NEO1-201ENST00000261908 KRTAP4-1Q9BYQ7 146 aa6.4□□□□□ -1.38
NEO1-201ENST00000261908 FAT2Q9NYQ8 4349 aa6.38□□□□□ -1.39
NEO1-201ENST00000261908 PLECQ15149 4684 aaKnown RBP6.38□□□□□ -1.39
NEO1-201ENST00000261908 SPRR2FQ96RM1 72 aa6.37□□□□□ -1.39
NEO1-201ENST00000261908 DNAH8Q96JB1 4490 aa6.37□□□□□ -1.39
NEO1-201ENST00000261908 STARD9Q9P2P6 4700 aa6.33□□□□□ -1.4
NEO1-201ENST00000261908 DNAH11Q96DT5 4516 aa6.33□□□□□ -1.4
NEO1-201ENST00000261908 KRTAP19-5Q3LI72 72 aa6.32□□□□□ -1.4
NEO1-201ENST00000261908 MT1HP80294 61 aa6.29□□□□□ -1.4
NEO1-201ENST00000261908 DNAH17Q9UFH2 4485 aa6.28□□□□□ -1.4
NEO1-201ENST00000261908 VPS13DQ5THJ4 4388 aa6.24□□□□□ -1.41
NEO1-201ENST00000261908 KRTAP10-7P60409 375 aaPredicted RBP6.22□□□□□ -1.41
NEO1-201ENST00000261908 LCE3CQ5T5A8 94 aa6.2□□□□□ -1.42
NEO1-201ENST00000261908 DNAH5Q8TE73 4624 aa6.2□□□□□ -1.42
NEO1-201ENST00000261908 MT2AP02795 61 aa6.17□□□□□ -1.42
NEO1-201ENST00000261908 LRP1BQ9NZR2 4599 aa6.14□□□□□ -1.43
NEO1-201ENST00000261908 SPRR2GQ9BYE4 73 aa6.12□□□□□ -1.43
NEO1-201ENST00000261908 MT1FP04733 61 aa6.1□□□□□ -1.43
NEO1-201ENST00000261908 HECTD4Q9Y4D8 3996 aa6.08□□□□□ -1.44
NEO1-201ENST00000261908 FAT1Q14517 4588 aa6.07□□□□□ -1.44
NEO1-201ENST00000261908 SPRR2EP22531 72 aa6.07□□□□□ -1.44
NEO1-201ENST00000261908 SPRR2BP35325 72 aa6.07□□□□□ -1.44
NEO1-201ENST00000261908 SPRR2AP35326 72 aa6.07□□□□□ -1.44
NEO1-201ENST00000261908 LPAP08519 4548 aa6.06□□□□□ -1.44
NEO1-201ENST00000261908 LCE3BQ5TA77 95 aa6.05□□□□□ -1.44
NEO1-201ENST00000261908 DYNC2H1Q8NCM8 4307 aaKnown RBP6.04□□□□□ -1.44
NEO1-201ENST00000261908 FAT3Q8TDW7 4589 aa5.98□□□□□ -1.45
NEO1-201ENST00000261908 SACSQ9NZJ4 4579 aa5.94□□□□□ -1.46
NEO1-201ENST00000261908 PKHD1P08F94 4074 aa5.89□□□□□ -1.47
NEO1-201ENST00000261908 KRTAP12-4P60329 112 aa5.86□□□□□ -1.47
NEO1-201ENST00000261908 KRTAP17-1Q9BYP8 105 aa5.85□□□□□ -1.47
NEO1-201ENST00000261908 MT1GP13640 62 aa5.85□□□□□ -1.47
NEO1-201ENST00000261908 DNHD1Q96M86 4753 aa5.84□□□□□ -1.47
NEO1-201ENST00000261908 APOBP04114 4563 aaKnown RBP5.84□□□□□ -1.47
NEO1-201ENST00000261908 SPRR2DP22532 72 aa5.8□□□□□ -1.48
NEO1-201ENST00000261908 HSPG2P98160 4391 aa5.73□□□□□ -1.49
NEO1-201ENST00000261908 PKD1P98161 4303 aa5.72□□□□□ -1.49
NEO1-201ENST00000261908 MYCBP2O75592 4640 aa5.71□□□□□ -1.5
NEO1-201ENST00000261908 DYNC1H1Q14204 4646 aaKnown RBP5.71□□□□□ -1.5
NEO1-201ENST00000261908 LRP1Q07954 4544 aaKnown RBP5.7□□□□□ -1.5
NEO1-201ENST00000261908 KRTAP4-8A0A0G2JLE6 195 aa5.69□□□□□ -1.5
NEO1-201ENST00000261908 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
NEO1-201ENST00000261908 KRTAP19-1Q8IUB9 90 aa5.63□□□□□ -1.51
NEO1-201ENST00000261908 MT1XP80297 61 aa5.63□□□□□ -1.51
NEO1-201ENST00000261908 LCE2BO14633 110 aa5.62□□□□□ -1.51
NEO1-201ENST00000261908 RYR1P21817 5038 aa5.6□□□□□ -1.51
NEO1-201ENST00000261908 LCE3DQ9BYE3 92 aa5.55□□□□□ -1.52
NEO1-201ENST00000261908 TNXBP22105 4242 aa5.54□□□□□ -1.52
NEO1-201ENST00000261908 PKHD1L1Q86WI1 4243 aa5.52□□□□□ -1.53
NEO1-201ENST00000261908 MT4P47944 62 aa5.52□□□□□ -1.53
NEO1-201ENST00000261908 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
NEO1-201ENST00000261908 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
NEO1-201ENST00000261908 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.54
NEO1-201ENST00000261908 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
NEO1-201ENST00000261908 MT1BP07438 61 aa5.44□□□□□ -1.54
NEO1-201ENST00000261908 LCE3EQ5T5B0 92 aa5.4□□□□□ -1.54
NEO1-201ENST00000261908 LCE2CQ5TA81 110 aa5.35□□□□□ -1.55
NEO1-201ENST00000261908 KRTAP9-8Q9BYQ0 159 aa5.35□□□□□ -1.55
NEO1-201ENST00000261908 FLGP20930 4061 aaPredicted RBP5.35□□□□□ -1.55
NEO1-201ENST00000261908 LCE2DQ5TA82 110 aaPredicted RBP5.33□□□□□ -1.56
NEO1-201ENST00000261908 HYDINQ4G0P3 5121 aa5.32□□□□□ -1.56
NEO1-201ENST00000261908 PRM1P04553 51 aa5.26□□□□□ -1.57
NEO1-201ENST00000261908 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
NEO1-201ENST00000261908 LRP2P98164 4655 aa5.21□□□□□ -1.57
NEO1-201ENST00000261908 LOC100996750A0A140TA64 210 aa5.21□□□□□ -1.58
NEO1-201ENST00000261908 RYR3Q15413 4870 aa5.2□□□□□ -1.58
NEO1-201ENST00000261908 KRTAP9-3Q9BYQ3 159 aa5.19□□□□□ -1.58
NEO1-201ENST00000261908 KRTAP19-3Q7Z4W3 81 aa5.15□□□□□ -1.58
NEO1-201ENST00000261908 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.59
NEO1-201ENST00000261908 LCE1BQ5T7P3 118 aa5.14□□□□□ -1.59
NEO1-201ENST00000261908 MT1LQ93083 61 aa5.13□□□□□ -1.59
NEO1-201ENST00000261908 SYNE2Q8WXH0 6885 aaKnown RBP5.13□□□□□ -1.59
NEO1-201ENST00000261908 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
NEO1-201ENST00000261908 MT1EP04732 61 aa5.05□□□□□ -1.6
NEO1-201ENST00000261908 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
NEO1-201ENST00000261908 MT3P25713 68 aa4.92□□□□□ -1.62
NEO1-201ENST00000261908 MT1MQ8N339 61 aa4.92□□□□□ -1.62
NEO1-201ENST00000261908 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
NEO1-201ENST00000261908 KRTAP9-6A0A140TA67 174 aa4.87□□□□□ -1.63
NEO1-201ENST00000261908 MUC17Q685J3 4493 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms