RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 LUZP6Q538Z0 58 aa8.03□□□□□ -1.12
PRPF40B-201ENST00000261897 KRTAP15-1Q3LI76 137 aa8.02□□□□□ -1.13
PRPF40B-201ENST00000261897 KRTAP3-3Q9BYR6 98 aa8.01□□□□□ -1.13
PRPF40B-201ENST00000261897 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
PRPF40B-201ENST00000261897 KRTAP12-1P59990 96 aa7.98□□□□□ -1.13
PRPF40B-201ENST00000261897 DNAH5Q8TE73 4624 aa7.97□□□□□ -1.13
PRPF40B-201ENST00000261897 XP32Q5T750 250 aa7.91□□□□□ -1.14
PRPF40B-201ENST00000261897 CAMK2N1Q7Z7J9 78 aa7.91□□□□□ -1.14
PRPF40B-201ENST00000261897 PLAC4Q8WY50 150 aa7.89□□□□□ -1.15
PRPF40B-201ENST00000261897 FAT2Q9NYQ8 4349 aa7.84□□□□□ -1.15
PRPF40B-201ENST00000261897 PKHD1P08F94 4074 aa7.84□□□□□ -1.15
PRPF40B-201ENST00000261897 Q5VSD8 79 aa7.84□□□□□ -1.15
PRPF40B-201ENST00000261897 DNHD1Q96M86 4753 aa7.82□□□□□ -1.16
PRPF40B-201ENST00000261897 DYNC2H1Q8NCM8 4307 aaKnown RBP7.81□□□□□ -1.16
PRPF40B-201ENST00000261897 HYDINQ4G0P3 5121 aa7.81□□□□□ -1.16
PRPF40B-201ENST00000261897 DYNC1H1Q14204 4646 aaKnown RBP7.77□□□□□ -1.16
PRPF40B-201ENST00000261897 LRP1Q07954 4544 aaKnown RBP7.74□□□□□ -1.17
PRPF40B-201ENST00000261897 APOBP04114 4563 aaKnown RBP7.72□□□□□ -1.17
PRPF40B-201ENST00000261897 FAT3Q8TDW7 4589 aa7.71□□□□□ -1.18
PRPF40B-201ENST00000261897 KRTAP10-4P60372 401 aaPredicted RBP7.59□□□□□ -1.19
PRPF40B-201ENST00000261897 SACSQ9NZJ4 4579 aa7.58□□□□□ -1.2
PRPF40B-201ENST00000261897 HSPG2P98160 4391 aa7.55□□□□□ -1.2
PRPF40B-201ENST00000261897 PKD1P98161 4303 aa7.52□□□□□ -1.21
PRPF40B-201ENST00000261897 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
PRPF40B-201ENST00000261897 A0A1B0GVY2 172 aa7.49□□□□□ -1.21
PRPF40B-201ENST00000261897 LRP2P98164 4655 aa7.45□□□□□ -1.22
PRPF40B-201ENST00000261897 LPAP08519 4548 aa7.35□□□□□ -1.23
PRPF40B-201ENST00000261897 J3QL48 77 aa7.34□□□□□ -1.23
PRPF40B-201ENST00000261897 KMT2CQ8NEZ4 4911 aaKnown RBP7.31□□□□□ -1.24
PRPF40B-201ENST00000261897 SEC61BP60468 96 aaKnown RBP7.3□□□□□ -1.24
PRPF40B-201ENST00000261897 TNP1P09430 55 aa7.29□□□□□ -1.24
PRPF40B-201ENST00000261897 PP632Q6XCG6 107 aa7.27□□□□□ -1.25
PRPF40B-201ENST00000261897 KIAA1109Q2LD37 5005 aa7.25□□□□□ -1.25
PRPF40B-201ENST00000261897 RYR1P21817 5038 aa7.24□□□□□ -1.25
PRPF40B-201ENST00000261897 MT1HL1P0DM35 61 aa7.22□□□□□ -1.25
PRPF40B-201ENST00000261897 PKHD1L1Q86WI1 4243 aa7.2□□□□□ -1.26
PRPF40B-201ENST00000261897 M0R2T5 61 aa7.13□□□□□ -1.27
PRPF40B-201ENST00000261897 KRTAP17-1Q9BYP8 105 aa7.11□□□□□ -1.27
PRPF40B-201ENST00000261897 RYR3Q15413 4870 aa7.03□□□□□ -1.28
PRPF40B-201ENST00000261897 KRTAP4-5Q9BYR2 181 aa6.99□□□□□ -1.29
PRPF40B-201ENST00000261897 KRTAP4-1Q9BYQ7 146 aa6.98□□□□□ -1.29
PRPF40B-201ENST00000261897 TNXBP22105 4242 aa6.97□□□□□ -1.29
PRPF40B-201ENST00000261897 MUC2Q02817 5179 aa6.94□□□□□ -1.3
PRPF40B-201ENST00000261897 EPPK1P58107 5090 aaKnown RBP6.86□□□□□ -1.31
PRPF40B-201ENST00000261897 ABCA13Q86UQ4 5058 aa6.86□□□□□ -1.31
PRPF40B-201ENST00000261897 RYR2Q92736 4967 aa6.86□□□□□ -1.31
PRPF40B-201ENST00000261897 LCE3AQ5TA76 89 aa6.74□□□□□ -1.33
PRPF40B-201ENST00000261897 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
PRPF40B-201ENST00000261897 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
PRPF40B-201ENST00000261897 FAT4Q6V0I7 4981 aa6.58□□□□□ -1.36
PRPF40B-201ENST00000261897 KRTAP21-3Q3LHN1 58 aa6.49□□□□□ -1.37
PRPF40B-201ENST00000261897 SPRR5A0A1B0GTR4 108 aa6.48□□□□□ -1.37
PRPF40B-201ENST00000261897 HERC2O95714 4834 aa6.42□□□□□ -1.38
PRPF40B-201ENST00000261897 INE1O15225 51 aa6.42□□□□□ -1.38
PRPF40B-201ENST00000261897 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
PRPF40B-201ENST00000261897 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
PRPF40B-201ENST00000261897 MUC17Q685J3 4493 aa6.39□□□□□ -1.39
PRPF40B-201ENST00000261897 RNF213Q63HN8 5207 aa6.36□□□□□ -1.39
PRPF40B-201ENST00000261897 KRTAP19-2Q3LHN2 52 aa6.35□□□□□ -1.39
PRPF40B-201ENST00000261897 KRTAP10-12P60413 245 aa6.32□□□□□ -1.4
PRPF40B-201ENST00000261897 PCLOQ9Y6V0 5065 aa6.31□□□□□ -1.4
PRPF40B-201ENST00000261897 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
PRPF40B-201ENST00000261897 HMCN2Q8NDA2 5059 aa6.28□□□□□ -1.4
PRPF40B-201ENST00000261897 FLGP20930 4061 aaPredicted RBP6.25□□□□□ -1.41
PRPF40B-201ENST00000261897 SPRR2GQ9BYE4 73 aa6.22□□□□□ -1.41
PRPF40B-201ENST00000261897 HERC1Q15751 4861 aa6.21□□□□□ -1.41
PRPF40B-201ENST00000261897 MT1FP04733 61 aa6.18□□□□□ -1.42
PRPF40B-201ENST00000261897 KRTAP8-1Q8IUC2 63 aa6.16□□□□□ -1.42
PRPF40B-201ENST00000261897 MT2AP02795 61 aa6.12□□□□□ -1.43
PRPF40B-201ENST00000261897 UBR4Q5T4S7 5183 aa6.11□□□□□ -1.43
PRPF40B-201ENST00000261897 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
PRPF40B-201ENST00000261897 MT1HP80294 61 aa6.06□□□□□ -1.44
PRPF40B-201ENST00000261897 LCE2CQ5TA81 110 aa6.01□□□□□ -1.45
PRPF40B-201ENST00000261897 KMT2DO14686 5537 aa6.01□□□□□ -1.45
PRPF40B-201ENST00000261897 MT1XP80297 61 aa5.99□□□□□ -1.45
PRPF40B-201ENST00000261897 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
PRPF40B-201ENST00000261897 KRTAP19-5Q3LI72 72 aa5.96□□□□□ -1.46
PRPF40B-201ENST00000261897 USH2AO75445 5202 aa5.91□□□□□ -1.46
PRPF40B-201ENST00000261897 MT1BP07438 61 aa5.9□□□□□ -1.47
PRPF40B-201ENST00000261897 CRCT1Q9UGL9 99 aa5.87□□□□□ -1.47
PRPF40B-201ENST00000261897 BIRC6Q9NR09 4857 aa5.87□□□□□ -1.47
PRPF40B-201ENST00000261897 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
PRPF40B-201ENST00000261897 KRTAP9-8Q9BYQ0 159 aa5.84□□□□□ -1.47
PRPF40B-201ENST00000261897 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
PRPF40B-201ENST00000261897 OBSCNQ5VST9 7968 aa5.83□□□□□ -1.48
PRPF40B-201ENST00000261897 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
PRPF40B-201ENST00000261897 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
PRPF40B-201ENST00000261897 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
PRPF40B-201ENST00000261897 KRTAP19-8Q3LI54 63 aa5.76□□□□□ -1.49
PRPF40B-201ENST00000261897 SYNE1Q8NF91 8797 aaKnown RBP5.67□□□□□ -1.5
PRPF40B-201ENST00000261897 DSTQ03001 7570 aaKnown RBP5.64□□□□□ -1.51
PRPF40B-201ENST00000261897 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
PRPF40B-201ENST00000261897 FCGBPQ9Y6R7 5405 aaPredicted RBP5.55□□□□□ -1.52
PRPF40B-201ENST00000261897 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
PRPF40B-201ENST00000261897 LCE2BO14633 110 aa5.43□□□□□ -1.54
PRPF40B-201ENST00000261897 KRTAP12-4P60329 112 aa5.41□□□□□ -1.54
PRPF40B-201ENST00000261897 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
PRPF40B-201ENST00000261897 MT1GP13640 62 aa5.34□□□□□ -1.55
PRPF40B-201ENST00000261897 KRTAP4-3Q9BYR4 195 aa5.34□□□□□ -1.56
PRPF40B-201ENST00000261897 KRTAP2-3P0C7H8 128 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms