RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 ZNF469Q96JG9 3925 aaPredicted RBP4.58□□□□□ -1.68
CSNK1A1-201ENST00000261798 CSMD3Q7Z407 3707 aa4.58□□□□□ -1.68
CSNK1A1-201ENST00000261798 AKAP9Q99996 3911 aa4.45□□□□□ -1.7
CSNK1A1-201ENST00000261798 DNAH5Q8TE73 4624 aa4.44□□□□□ -1.7
CSNK1A1-201ENST00000261798 DNAH10Q8IVF4 4471 aa4.44□□□□□ -1.7
CSNK1A1-201ENST00000261798 DNAH11Q96DT5 4516 aa4.43□□□□□ -1.7
CSNK1A1-201ENST00000261798 DNAH1Q9P2D7 4330 aa4.4□□□□□ -1.71
CSNK1A1-201ENST00000261798 DNAH9Q9NYC9 4486 aa4.39□□□□□ -1.71
CSNK1A1-201ENST00000261798 CRCT1Q9UGL9 99 aa4.38□□□□□ -1.71
CSNK1A1-201ENST00000261798 PLECQ15149 4684 aaKnown RBP4.38□□□□□ -1.71
CSNK1A1-201ENST00000261798 FAT1Q14517 4588 aa4.35□□□□□ -1.71
CSNK1A1-201ENST00000261798 DNAH17Q9UFH2 4485 aa4.32□□□□□ -1.72
CSNK1A1-201ENST00000261798 DNAH8Q96JB1 4490 aa4.32□□□□□ -1.72
CSNK1A1-201ENST00000261798 KRTAP4-1Q9BYQ7 146 aa4.31□□□□□ -1.72
CSNK1A1-201ENST00000261798 DNHD1Q96M86 4753 aa4.31□□□□□ -1.72
CSNK1A1-201ENST00000261798 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
CSNK1A1-201ENST00000261798 LRP1BQ9NZR2 4599 aa4.28□□□□□ -1.72
CSNK1A1-201ENST00000261798 SPRR2GQ9BYE4 73 aa4.28□□□□□ -1.72
CSNK1A1-201ENST00000261798 VPS13DQ5THJ4 4388 aa4.27□□□□□ -1.73
CSNK1A1-201ENST00000261798 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
CSNK1A1-201ENST00000261798 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
CSNK1A1-201ENST00000261798 DYNC1H1Q14204 4646 aaKnown RBP4.21□□□□□ -1.74
CSNK1A1-201ENST00000261798 MT1HP80294 61 aa4.2□□□□□ -1.74
CSNK1A1-201ENST00000261798 STARD9Q9P2P6 4700 aa4.17□□□□□ -1.74
CSNK1A1-201ENST00000261798 MT2AP02795 61 aa4.16□□□□□ -1.74
CSNK1A1-201ENST00000261798 SACSQ9NZJ4 4579 aa4.16□□□□□ -1.74
CSNK1A1-201ENST00000261798 MYCBP2O75592 4640 aa4.16□□□□□ -1.74
CSNK1A1-201ENST00000261798 KIAA1109Q2LD37 5005 aa4.12□□□□□ -1.75
CSNK1A1-201ENST00000261798 RYR1P21817 5038 aa4.12□□□□□ -1.75
CSNK1A1-201ENST00000261798 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
CSNK1A1-201ENST00000261798 SPRR5A0A1B0GTR4 108 aa4.09□□□□□ -1.75
CSNK1A1-201ENST00000261798 DYNC2H1Q8NCM8 4307 aaKnown RBP4.08□□□□□ -1.76
CSNK1A1-201ENST00000261798 DNAH3Q8TD57 4116 aa4.08□□□□□ -1.76
CSNK1A1-201ENST00000261798 MT1FP04733 61 aa4.08□□□□□ -1.76
CSNK1A1-201ENST00000261798 KRTAP19-5Q3LI72 72 aa4.08□□□□□ -1.76
CSNK1A1-201ENST00000261798 APOBP04114 4563 aaKnown RBP4.08□□□□□ -1.76
CSNK1A1-201ENST00000261798 ANK2Q01484 3957 aa4.05□□□□□ -1.76
CSNK1A1-201ENST00000261798 FAT2Q9NYQ8 4349 aa4.04□□□□□ -1.76
CSNK1A1-201ENST00000261798 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
CSNK1A1-201ENST00000261798 PRKDCP78527 4128 aaKnown RBP4.01□□□□□ -1.77
CSNK1A1-201ENST00000261798 KRTAP19-1Q8IUB9 90 aa4□□□□□ -1.77
CSNK1A1-201ENST00000261798 VPS13BQ7Z7G8 4022 aa3.99□□□□□ -1.77
CSNK1A1-201ENST00000261798 LYSTQ99698 3801 aa3.97□□□□□ -1.77
CSNK1A1-201ENST00000261798 KRTAP19-8Q3LI54 63 aa3.96□□□□□ -1.78
CSNK1A1-201ENST00000261798 DNAH6Q9C0G6 4158 aa3.95□□□□□ -1.78
CSNK1A1-201ENST00000261798 KMT2AQ03164 3969 aa3.94□□□□□ -1.78
CSNK1A1-201ENST00000261798 LRP1Q07954 4544 aaKnown RBP3.94□□□□□ -1.78
CSNK1A1-201ENST00000261798 SPRR2FQ96RM1 72 aa3.92□□□□□ -1.78
CSNK1A1-201ENST00000261798 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
CSNK1A1-201ENST00000261798 FAT3Q8TDW7 4589 aa3.9□□□□□ -1.78
CSNK1A1-201ENST00000261798 RYR3Q15413 4870 aa3.9□□□□□ -1.79
CSNK1A1-201ENST00000261798 MT1XP80297 61 aa3.87□□□□□ -1.79
CSNK1A1-201ENST00000261798 LRP2P98164 4655 aa3.86□□□□□ -1.79
CSNK1A1-201ENST00000261798 FRAS1Q86XX4 4008 aa3.85□□□□□ -1.79
CSNK1A1-201ENST00000261798 CMYA5Q8N3K9 4069 aa3.83□□□□□ -1.8
CSNK1A1-201ENST00000261798 RYR2Q92736 4967 aa3.83□□□□□ -1.8
CSNK1A1-201ENST00000261798 KRTAP17-1Q9BYP8 105 aa3.83□□□□□ -1.8
CSNK1A1-201ENST00000261798 DNAH7Q8WXX0 4024 aa3.81□□□□□ -1.8
CSNK1A1-201ENST00000261798 HECTD4Q9Y4D8 3996 aa3.8□□□□□ -1.8
CSNK1A1-201ENST00000261798 MT1BP07438 61 aa3.8□□□□□ -1.8
CSNK1A1-201ENST00000261798 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
CSNK1A1-201ENST00000261798 SPRR2EP22531 72 aa3.75□□□□□ -1.81
CSNK1A1-201ENST00000261798 SPRR2BP35325 72 aa3.75□□□□□ -1.81
CSNK1A1-201ENST00000261798 SPRR2AP35326 72 aa3.75□□□□□ -1.81
CSNK1A1-201ENST00000261798 HYDINQ4G0P3 5121 aa3.75□□□□□ -1.81
CSNK1A1-201ENST00000261798 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
CSNK1A1-201ENST00000261798 HERC2O95714 4834 aa3.71□□□□□ -1.81
CSNK1A1-201ENST00000261798 HERC1Q15751 4861 aa3.7□□□□□ -1.82
CSNK1A1-201ENST00000261798 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
CSNK1A1-201ENST00000261798 LCE2CQ5TA81 110 aa3.66□□□□□ -1.82
CSNK1A1-201ENST00000261798 MT1GP13640 62 aa3.65□□□□□ -1.82
CSNK1A1-201ENST00000261798 HSPG2P98160 4391 aa3.65□□□□□ -1.82
CSNK1A1-201ENST00000261798 KRTAP4-8A0A0G2JLE6 195 aa3.65□□□□□ -1.83
CSNK1A1-201ENST00000261798 KRTAP4-8Q9BYQ9 185 aa3.65□□□□□ -1.83
CSNK1A1-201ENST00000261798 SPRR2DP22532 72 aa3.64□□□□□ -1.83
CSNK1A1-201ENST00000261798 PKHD1P08F94 4074 aa3.64□□□□□ -1.83
CSNK1A1-201ENST00000261798 KRTAP19-2Q3LHN2 52 aa3.62□□□□□ -1.83
CSNK1A1-201ENST00000261798 KMT2CQ8NEZ4 4911 aaKnown RBP3.62□□□□□ -1.83
CSNK1A1-201ENST00000261798 KRTAP9-3Q9BYQ3 159 aa3.62□□□□□ -1.83
CSNK1A1-201ENST00000261798 PKD1P98161 4303 aa3.61□□□□□ -1.83
CSNK1A1-201ENST00000261798 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
CSNK1A1-201ENST00000261798 LCE2BO14633 110 aa3.61□□□□□ -1.83
CSNK1A1-201ENST00000261798 PKHD1L1Q86WI1 4243 aa3.6□□□□□ -1.83
CSNK1A1-201ENST00000261798 MUC17Q685J3 4493 aa3.59□□□□□ -1.84
CSNK1A1-201ENST00000261798 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
CSNK1A1-201ENST00000261798 BIRC6Q9NR09 4857 aa3.57□□□□□ -1.84
CSNK1A1-201ENST00000261798 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
CSNK1A1-201ENST00000261798 PCLOQ9Y6V0 5065 aa3.53□□□□□ -1.84
CSNK1A1-201ENST00000261798 KRTAP4-7Q9BYR0 210 aa3.52□□□□□ -1.85
CSNK1A1-201ENST00000261798 MT1LQ93083 61 aa3.52□□□□□ -1.85
CSNK1A1-201ENST00000261798 MT1EP04732 61 aa3.46□□□□□ -1.86
CSNK1A1-201ENST00000261798 LCE2DQ5TA82 110 aaPredicted RBP3.46□□□□□ -1.86
CSNK1A1-201ENST00000261798 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
CSNK1A1-201ENST00000261798 ABCA13Q86UQ4 5058 aa3.44□□□□□ -1.86
CSNK1A1-201ENST00000261798 LPAP08519 4548 aa3.43□□□□□ -1.86
CSNK1A1-201ENST00000261798 FLGP20930 4061 aaPredicted RBP3.43□□□□□ -1.86
CSNK1A1-201ENST00000261798 UBR4Q5T4S7 5183 aa3.41□□□□□ -1.86
CSNK1A1-201ENST00000261798 KRTAP9-2Q9BYQ4 174 aa3.38□□□□□ -1.87
CSNK1A1-201ENST00000261798 EPPK1P58107 5090 aaKnown RBP3.36□□□□□ -1.87
CSNK1A1-201ENST00000261798 KRTAP9-6A0A140TA67 174 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms