RNA–Protein interactions for RNA: ENST00000261177.9

TSPAN11-201, Transcript of tetraspanin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN11, Length 5,505 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN11-201ENST00000261177 VPS13CQ709C8 3753 aa6.21□□□□□ -1.42
TSPAN11-201ENST00000261177 CRCT1Q9UGL9 99 aa6.17□□□□□ -1.42
TSPAN11-201ENST00000261177 DNAH5Q8TE73 4624 aa6.17□□□□□ -1.42
TSPAN11-201ENST00000261177 DNAH1Q9P2D7 4330 aa6.13□□□□□ -1.43
TSPAN11-201ENST00000261177 DNAH2Q9P225 4427 aa6.11□□□□□ -1.43
TSPAN11-201ENST00000261177 DNAH10Q8IVF4 4471 aa6.11□□□□□ -1.43
TSPAN11-201ENST00000261177 AKAP9Q99996 3911 aa6.05□□□□□ -1.44
TSPAN11-201ENST00000261177 DNAH17Q9UFH2 4485 aa6.04□□□□□ -1.44
TSPAN11-201ENST00000261177 KRTAP4-1Q9BYQ7 146 aa6.03□□□□□ -1.44
TSPAN11-201ENST00000261177 DNAH11Q96DT5 4516 aa6.02□□□□□ -1.45
TSPAN11-201ENST00000261177 PLECQ15149 4684 aaKnown RBP6.02□□□□□ -1.45
TSPAN11-201ENST00000261177 VPS13DQ5THJ4 4388 aa6.01□□□□□ -1.45
TSPAN11-201ENST00000261177 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
TSPAN11-201ENST00000261177 MT1HP80294 61 aa5.96□□□□□ -1.46
TSPAN11-201ENST00000261177 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
TSPAN11-201ENST00000261177 CSMD3Q7Z407 3707 aa5.91□□□□□ -1.46
TSPAN11-201ENST00000261177 ZNF469Q96JG9 3925 aaPredicted RBP5.9□□□□□ -1.47
TSPAN11-201ENST00000261177 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
TSPAN11-201ENST00000261177 MT2AP02795 61 aa5.89□□□□□ -1.47
TSPAN11-201ENST00000261177 DNAH3Q8TD57 4116 aa5.86□□□□□ -1.47
TSPAN11-201ENST00000261177 DYNC1H1Q14204 4646 aaKnown RBP5.85□□□□□ -1.47
TSPAN11-201ENST00000261177 SACSQ9NZJ4 4579 aa5.82□□□□□ -1.48
TSPAN11-201ENST00000261177 DYNC2H1Q8NCM8 4307 aaKnown RBP5.81□□□□□ -1.48
TSPAN11-201ENST00000261177 LRP1BQ9NZR2 4599 aa5.8□□□□□ -1.48
TSPAN11-201ENST00000261177 FAT2Q9NYQ8 4349 aa5.77□□□□□ -1.49
TSPAN11-201ENST00000261177 MT1FP04733 61 aa5.75□□□□□ -1.49
TSPAN11-201ENST00000261177 STARD9Q9P2P6 4700 aa5.73□□□□□ -1.49
TSPAN11-201ENST00000261177 FAT1Q14517 4588 aa5.71□□□□□ -1.5
TSPAN11-201ENST00000261177 DNAH8Q96JB1 4490 aa5.7□□□□□ -1.5
TSPAN11-201ENST00000261177 DNHD1Q96M86 4753 aa5.68□□□□□ -1.5
TSPAN11-201ENST00000261177 KRTAP19-4Q3LI73 84 aa5.67□□□□□ -1.5
TSPAN11-201ENST00000261177 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
TSPAN11-201ENST00000261177 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
TSPAN11-201ENST00000261177 RYR1P21817 5038 aa5.58□□□□□ -1.52
TSPAN11-201ENST00000261177 APOBP04114 4563 aaKnown RBP5.57□□□□□ -1.52
TSPAN11-201ENST00000261177 DNAH6Q9C0G6 4158 aa5.57□□□□□ -1.52
TSPAN11-201ENST00000261177 ANK2Q01484 3957 aa5.56□□□□□ -1.52
TSPAN11-201ENST00000261177 KRTAP19-8Q3LI54 63 aa5.53□□□□□ -1.52
TSPAN11-201ENST00000261177 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
TSPAN11-201ENST00000261177 PRKDCP78527 4128 aaKnown RBP5.49□□□□□ -1.53
TSPAN11-201ENST00000261177 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
TSPAN11-201ENST00000261177 VPS13BQ7Z7G8 4022 aa5.49□□□□□ -1.53
TSPAN11-201ENST00000261177 KRTAP19-1Q8IUB9 90 aa5.47□□□□□ -1.53
TSPAN11-201ENST00000261177 DNAH7Q8WXX0 4024 aa5.45□□□□□ -1.54
TSPAN11-201ENST00000261177 KMT2AQ03164 3969 aa5.44□□□□□ -1.54
TSPAN11-201ENST00000261177 CMYA5Q8N3K9 4069 aa5.41□□□□□ -1.54
TSPAN11-201ENST00000261177 RYR3Q15413 4870 aa5.4□□□□□ -1.54
TSPAN11-201ENST00000261177 FAT3Q8TDW7 4589 aa5.38□□□□□ -1.55
TSPAN11-201ENST00000261177 KRTAP17-1Q9BYP8 105 aa5.37□□□□□ -1.55
TSPAN11-201ENST00000261177 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
TSPAN11-201ENST00000261177 MT1XP80297 61 aa5.34□□□□□ -1.55
TSPAN11-201ENST00000261177 RYR2Q92736 4967 aa5.33□□□□□ -1.56
TSPAN11-201ENST00000261177 LRP1Q07954 4544 aaKnown RBP5.32□□□□□ -1.56
TSPAN11-201ENST00000261177 MT1BP07438 61 aa5.28□□□□□ -1.56
TSPAN11-201ENST00000261177 HERC1Q15751 4861 aa5.26□□□□□ -1.57
TSPAN11-201ENST00000261177 HECTD4Q9Y4D8 3996 aa5.26□□□□□ -1.57
TSPAN11-201ENST00000261177 HSPG2P98160 4391 aa5.26□□□□□ -1.57
TSPAN11-201ENST00000261177 LYSTQ99698 3801 aa5.25□□□□□ -1.57
TSPAN11-201ENST00000261177 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
TSPAN11-201ENST00000261177 FRAS1Q86XX4 4008 aa5.24□□□□□ -1.57
TSPAN11-201ENST00000261177 MYCBP2O75592 4640 aa5.22□□□□□ -1.57
TSPAN11-201ENST00000261177 KIAA1109Q2LD37 5005 aa5.19□□□□□ -1.58
TSPAN11-201ENST00000261177 LCE2CQ5TA81 110 aa5.16□□□□□ -1.58
TSPAN11-201ENST00000261177 SPRR2EP22531 72 aa5.14□□□□□ -1.59
TSPAN11-201ENST00000261177 SPRR2BP35325 72 aa5.14□□□□□ -1.59
TSPAN11-201ENST00000261177 SPRR2AP35326 72 aa5.14□□□□□ -1.59
TSPAN11-201ENST00000261177 KRTAP9-3Q9BYQ3 159 aa5.14□□□□□ -1.59
TSPAN11-201ENST00000261177 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
TSPAN11-201ENST00000261177 MT1GP13640 62 aa5.08□□□□□ -1.6
TSPAN11-201ENST00000261177 LCE3BQ5TA77 95 aa5.07□□□□□ -1.6
TSPAN11-201ENST00000261177 PKD1P98161 4303 aa5.05□□□□□ -1.6
TSPAN11-201ENST00000261177 KRTAP4-8A0A0G2JLE6 195 aa5.03□□□□□ -1.6
TSPAN11-201ENST00000261177 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
TSPAN11-201ENST00000261177 LCE2BO14633 110 aa5□□□□□ -1.61
TSPAN11-201ENST00000261177 SPRR2DP22532 72 aa4.98□□□□□ -1.61
TSPAN11-201ENST00000261177 PKHD1L1Q86WI1 4243 aa4.98□□□□□ -1.61
TSPAN11-201ENST00000261177 HERC2O95714 4834 aa4.95□□□□□ -1.62
TSPAN11-201ENST00000261177 BIRC6Q9NR09 4857 aa4.94□□□□□ -1.62
TSPAN11-201ENST00000261177 KRTAP19-2Q3LHN2 52 aa4.93□□□□□ -1.62
TSPAN11-201ENST00000261177 LCE3DQ9BYE3 92 aa4.92□□□□□ -1.62
TSPAN11-201ENST00000261177 HYDINQ4G0P3 5121 aa4.91□□□□□ -1.62
TSPAN11-201ENST00000261177 LRP2P98164 4655 aa4.89□□□□□ -1.63
TSPAN11-201ENST00000261177 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
TSPAN11-201ENST00000261177 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
TSPAN11-201ENST00000261177 MT1LQ93083 61 aa4.86□□□□□ -1.63
TSPAN11-201ENST00000261177 MT1EP04732 61 aa4.82□□□□□ -1.64
TSPAN11-201ENST00000261177 PCLOQ9Y6V0 5065 aa4.81□□□□□ -1.64
TSPAN11-201ENST00000261177 TNXBP22105 4242 aa4.8□□□□□ -1.64
TSPAN11-201ENST00000261177 PKHD1P08F94 4074 aa4.78□□□□□ -1.64
TSPAN11-201ENST00000261177 LPAP08519 4548 aa4.77□□□□□ -1.65
TSPAN11-201ENST00000261177 FLGP20930 4061 aaPredicted RBP4.75□□□□□ -1.65
TSPAN11-201ENST00000261177 MUC17Q685J3 4493 aa4.75□□□□□ -1.65
TSPAN11-201ENST00000261177 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
TSPAN11-201ENST00000261177 KMT2CQ8NEZ4 4911 aaKnown RBP4.68□□□□□ -1.66
TSPAN11-201ENST00000261177 KRTAP19-6Q3LI70 58 aa4.66□□□□□ -1.66
TSPAN11-201ENST00000261177 MT1MQ8N339 61 aa4.65□□□□□ -1.66
TSPAN11-201ENST00000261177 MT3P25713 68 aa4.55□□□□□ -1.68
TSPAN11-201ENST00000261177 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
TSPAN11-201ENST00000261177 PRM1P04553 51 aa4.52□□□□□ -1.69
TSPAN11-201ENST00000261177 ABCA13Q86UQ4 5058 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms