RNA–Protein interactions for RNA: ENST00000259241.6

HS6ST1-201, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS6ST1, Length 3,932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-201ENST00000259241 CMYA5Q8N3K9 4069 aa6.37□□□□□ -1.39
HS6ST1-201ENST00000259241 MYCBP2O75592 4640 aa6.35□□□□□ -1.39
HS6ST1-201ENST00000259241 DYNC1H1Q14204 4646 aaKnown RBP6.35□□□□□ -1.39
HS6ST1-201ENST00000259241 DNAH3Q8TD57 4116 aa6.34□□□□□ -1.4
HS6ST1-201ENST00000259241 KIAA1109Q2LD37 5005 aa6.33□□□□□ -1.4
HS6ST1-201ENST00000259241 RYR1P21817 5038 aa6.31□□□□□ -1.4
HS6ST1-201ENST00000259241 FRAS1Q86XX4 4008 aa6.29□□□□□ -1.4
HS6ST1-201ENST00000259241 DNAH17Q9UFH2 4485 aa6.29□□□□□ -1.4
HS6ST1-201ENST00000259241 DNAH2Q9P225 4427 aa6.29□□□□□ -1.4
HS6ST1-201ENST00000259241 KRTAP13-4Q3LI77 160 aa6.27□□□□□ -1.41
HS6ST1-201ENST00000259241 KRTAP12-2P59991 146 aa6.26□□□□□ -1.41
HS6ST1-201ENST00000259241 DNAH7Q8WXX0 4024 aa6.25□□□□□ -1.41
HS6ST1-201ENST00000259241 KRTAP10-10P60014 251 aa6.23□□□□□ -1.41
HS6ST1-201ENST00000259241 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
HS6ST1-201ENST00000259241 ALMS1Q8TCU4 4167 aa6.21□□□□□ -1.42
HS6ST1-201ENST00000259241 NDUFAF8A1L188 74 aa6.2□□□□□ -1.42
HS6ST1-201ENST00000259241 FAT3Q8TDW7 4589 aa6.2□□□□□ -1.42
HS6ST1-201ENST00000259241 DNAH6Q9C0G6 4158 aa6.18□□□□□ -1.42
HS6ST1-201ENST00000259241 VPS13BQ7Z7G8 4022 aa6.18□□□□□ -1.42
HS6ST1-201ENST00000259241 TNP1P09430 55 aa6.17□□□□□ -1.42
HS6ST1-201ENST00000259241 SACSQ9NZJ4 4579 aa6.16□□□□□ -1.42
HS6ST1-201ENST00000259241 LRP1Q07954 4544 aaKnown RBP6.16□□□□□ -1.42
HS6ST1-201ENST00000259241 KRTAP3-3Q9BYR6 98 aa6.15□□□□□ -1.42
HS6ST1-201ENST00000259241 RYR3Q15413 4870 aa6.14□□□□□ -1.43
HS6ST1-201ENST00000259241 KRTAP12-1P59990 96 aa6.13□□□□□ -1.43
HS6ST1-201ENST00000259241 HYDINQ4G0P3 5121 aa6.13□□□□□ -1.43
HS6ST1-201ENST00000259241 DYNC2H1Q8NCM8 4307 aaKnown RBP6.12□□□□□ -1.43
HS6ST1-201ENST00000259241 KRTAP3-2Q9BYR7 98 aa6.07□□□□□ -1.44
HS6ST1-201ENST00000259241 APOBP04114 4563 aaKnown RBP6.07□□□□□ -1.44
HS6ST1-201ENST00000259241 PKHD1P08F94 4074 aa6.04□□□□□ -1.44
HS6ST1-201ENST00000259241 KRTAP17-1Q9BYP8 105 aa6.02□□□□□ -1.45
HS6ST1-201ENST00000259241 KMT2CQ8NEZ4 4911 aaKnown RBP6.01□□□□□ -1.45
HS6ST1-201ENST00000259241 FAT2Q9NYQ8 4349 aa6□□□□□ -1.45
HS6ST1-201ENST00000259241 HECTD4Q9Y4D8 3996 aa5.98□□□□□ -1.45
HS6ST1-201ENST00000259241 RYR2Q92736 4967 aa5.96□□□□□ -1.46
HS6ST1-201ENST00000259241 LORP23490 312 aaPredicted RBP5.93□□□□□ -1.46
HS6ST1-201ENST00000259241 KRTAP4-1Q9BYQ7 146 aa5.89□□□□□ -1.47
HS6ST1-201ENST00000259241 LRP2P98164 4655 aa5.89□□□□□ -1.47
HS6ST1-201ENST00000259241 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
HS6ST1-201ENST00000259241 HERC2O95714 4834 aa5.8□□□□□ -1.48
HS6ST1-201ENST00000259241 PKD1P98161 4303 aa5.72□□□□□ -1.49
HS6ST1-201ENST00000259241 PRO2289Q9P1D8 64 aa5.69□□□□□ -1.5
HS6ST1-201ENST00000259241 EPPK1P58107 5090 aaKnown RBP5.68□□□□□ -1.5
HS6ST1-201ENST00000259241 HSPG2P98160 4391 aa5.66□□□□□ -1.5
HS6ST1-201ENST00000259241 LPAP08519 4548 aa5.62□□□□□ -1.51
HS6ST1-201ENST00000259241 BIRC6Q9NR09 4857 aa5.58□□□□□ -1.52
HS6ST1-201ENST00000259241 PCLOQ9Y6V0 5065 aa5.55□□□□□ -1.52
HS6ST1-201ENST00000259241 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
HS6ST1-201ENST00000259241 ABCA13Q86UQ4 5058 aa5.49□□□□□ -1.53
HS6ST1-201ENST00000259241 MT1HP80294 61 aa5.44□□□□□ -1.54
HS6ST1-201ENST00000259241 LCE3AQ5TA76 89 aa5.4□□□□□ -1.55
HS6ST1-201ENST00000259241 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
HS6ST1-201ENST00000259241 MT2AP02795 61 aa5.38□□□□□ -1.55
HS6ST1-201ENST00000259241 MUC2Q02817 5179 aa5.37□□□□□ -1.55
HS6ST1-201ENST00000259241 MT1FP04733 61 aa5.36□□□□□ -1.55
HS6ST1-201ENST00000259241 RNF213Q63HN8 5207 aa5.35□□□□□ -1.55
HS6ST1-201ENST00000259241 HERC1Q15751 4861 aa5.34□□□□□ -1.56
HS6ST1-201ENST00000259241 PKHD1L1Q86WI1 4243 aa5.33□□□□□ -1.56
HS6ST1-201ENST00000259241 TNXBP22105 4242 aa5.29□□□□□ -1.56
HS6ST1-201ENST00000259241 KRTAP12-3P60328 96 aa5.28□□□□□ -1.56
HS6ST1-201ENST00000259241 FSIP2Q5CZC0 6907 aa5.27□□□□□ -1.57
HS6ST1-201ENST00000259241 CRCT1Q9UGL9 99 aa5.23□□□□□ -1.57
HS6ST1-201ENST00000259241 FAT4Q6V0I7 4981 aa5.23□□□□□ -1.57
HS6ST1-201ENST00000259241 SPRR2GQ9BYE4 73 aa5.22□□□□□ -1.57
HS6ST1-201ENST00000259241 KRTAP19-1Q8IUB9 90 aa5.19□□□□□ -1.58
HS6ST1-201ENST00000259241 UBR4Q5T4S7 5183 aa5.18□□□□□ -1.58
HS6ST1-201ENST00000259241 LCE2CQ5TA81 110 aa5.14□□□□□ -1.59
HS6ST1-201ENST00000259241 MUC17Q685J3 4493 aa5.05□□□□□ -1.6
HS6ST1-201ENST00000259241 KRTAP19-2Q3LHN2 52 aa5.05□□□□□ -1.6
HS6ST1-201ENST00000259241 KRTAP9-8Q9BYQ0 159 aa5.04□□□□□ -1.6
HS6ST1-201ENST00000259241 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
HS6ST1-201ENST00000259241 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
HS6ST1-201ENST00000259241 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
HS6ST1-201ENST00000259241 KRTAP8-1Q8IUC2 63 aa4.95□□□□□ -1.62
HS6ST1-201ENST00000259241 MT1BP07438 61 aa4.95□□□□□ -1.62
HS6ST1-201ENST00000259241 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
HS6ST1-201ENST00000259241 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
HS6ST1-201ENST00000259241 MT1XP80297 61 aa4.91□□□□□ -1.62
HS6ST1-201ENST00000259241 KRTAP19-8Q3LI54 63 aa4.9□□□□□ -1.62
HS6ST1-201ENST00000259241 KRTAP4-8A0A0G2JLE6 195 aa4.88□□□□□ -1.63
HS6ST1-201ENST00000259241 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
HS6ST1-201ENST00000259241 KRTAP4-8Q9BYQ9 185 aa4.88□□□□□ -1.63
HS6ST1-201ENST00000259241 KRTAP9-3Q9BYQ3 159 aa4.84□□□□□ -1.63
HS6ST1-201ENST00000259241 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
HS6ST1-201ENST00000259241 LCE2BO14633 110 aa4.78□□□□□ -1.65
HS6ST1-201ENST00000259241 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
HS6ST1-201ENST00000259241 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
HS6ST1-201ENST00000259241 USH2AO75445 5202 aa4.72□□□□□ -1.65
HS6ST1-201ENST00000259241 LCE3CQ5T5A8 94 aa4.69□□□□□ -1.66
HS6ST1-201ENST00000259241 INE1O15225 51 aa4.62□□□□□ -1.67
HS6ST1-201ENST00000259241 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
HS6ST1-201ENST00000259241 LCE2AQ5TA79 106 aaPredicted RBP4.6□□□□□ -1.67
HS6ST1-201ENST00000259241 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
HS6ST1-201ENST00000259241 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
HS6ST1-201ENST00000259241 KMT2DO14686 5537 aa4.53□□□□□ -1.68
HS6ST1-201ENST00000259241 FCGBPQ9Y6R7 5405 aaPredicted RBP4.5□□□□□ -1.69
HS6ST1-201ENST00000259241 MT1GP13640 62 aa4.49□□□□□ -1.69
HS6ST1-201ENST00000259241 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
HS6ST1-201ENST00000259241 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
HS6ST1-201ENST00000259241 MT1LQ93083 61 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms