RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 DNAH1Q9P2D7 4330 aa4.75□□□□□ -1.65
URB2-201ENST00000258243 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
URB2-201ENST00000258243 DNAH5Q8TE73 4624 aa4.69□□□□□ -1.66
URB2-201ENST00000258243 DNAH11Q96DT5 4516 aa4.69□□□□□ -1.66
URB2-201ENST00000258243 CSMD3Q7Z407 3707 aa4.68□□□□□ -1.66
URB2-201ENST00000258243 DNAH10Q8IVF4 4471 aa4.66□□□□□ -1.66
URB2-201ENST00000258243 KRTAP10-5P60370 271 aa4.66□□□□□ -1.66
URB2-201ENST00000258243 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
URB2-201ENST00000258243 MT1HP80294 61 aa4.6□□□□□ -1.67
URB2-201ENST00000258243 LORP23490 312 aaPredicted RBP4.59□□□□□ -1.67
URB2-201ENST00000258243 KRTAP8-1Q8IUC2 63 aa4.59□□□□□ -1.67
URB2-201ENST00000258243 DNHD1Q96M86 4753 aa4.59□□□□□ -1.68
URB2-201ENST00000258243 DNAH2Q9P225 4427 aa4.58□□□□□ -1.68
URB2-201ENST00000258243 PLECQ15149 4684 aaKnown RBP4.57□□□□□ -1.68
URB2-201ENST00000258243 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
URB2-201ENST00000258243 VPS13DQ5THJ4 4388 aa4.55□□□□□ -1.68
URB2-201ENST00000258243 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
URB2-201ENST00000258243 DYNC1H1Q14204 4646 aaKnown RBP4.53□□□□□ -1.68
URB2-201ENST00000258243 DNAH17Q9UFH2 4485 aa4.52□□□□□ -1.69
URB2-201ENST00000258243 MT2AP02795 61 aa4.47□□□□□ -1.69
URB2-201ENST00000258243 FAT2Q9NYQ8 4349 aa4.46□□□□□ -1.69
URB2-201ENST00000258243 LRP1BQ9NZR2 4599 aa4.45□□□□□ -1.7
URB2-201ENST00000258243 DYNC2H1Q8NCM8 4307 aaKnown RBP4.42□□□□□ -1.7
URB2-201ENST00000258243 DNAH3Q8TD57 4116 aa4.41□□□□□ -1.7
URB2-201ENST00000258243 ANK2Q01484 3957 aa4.39□□□□□ -1.71
URB2-201ENST00000258243 PRKDCP78527 4128 aaKnown RBP4.39□□□□□ -1.71
URB2-201ENST00000258243 STARD9Q9P2P6 4700 aa4.38□□□□□ -1.71
URB2-201ENST00000258243 SACSQ9NZJ4 4579 aa4.37□□□□□ -1.71
URB2-201ENST00000258243 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
URB2-201ENST00000258243 MT1FP04733 61 aa4.36□□□□□ -1.71
URB2-201ENST00000258243 SPRR2GQ9BYE4 73 aa4.36□□□□□ -1.71
URB2-201ENST00000258243 RYR1P21817 5038 aa4.35□□□□□ -1.71
URB2-201ENST00000258243 DNAH8Q96JB1 4490 aa4.34□□□□□ -1.71
URB2-201ENST00000258243 DNAH6Q9C0G6 4158 aa4.34□□□□□ -1.72
URB2-201ENST00000258243 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
URB2-201ENST00000258243 FAT1Q14517 4588 aa4.3□□□□□ -1.72
URB2-201ENST00000258243 CMYA5Q8N3K9 4069 aa4.29□□□□□ -1.72
URB2-201ENST00000258243 KMT2AQ03164 3969 aa4.27□□□□□ -1.73
URB2-201ENST00000258243 RYR3Q15413 4870 aa4.25□□□□□ -1.73
URB2-201ENST00000258243 KRTAP17-1Q9BYP8 105 aa4.23□□□□□ -1.73
URB2-201ENST00000258243 LYSTQ99698 3801 aa4.22□□□□□ -1.73
URB2-201ENST00000258243 DNAH7Q8WXX0 4024 aa4.18□□□□□ -1.74
URB2-201ENST00000258243 APOBP04114 4563 aaKnown RBP4.18□□□□□ -1.74
URB2-201ENST00000258243 FAT3Q8TDW7 4589 aa4.16□□□□□ -1.74
URB2-201ENST00000258243 MT3P25713 68 aa4.15□□□□□ -1.75
URB2-201ENST00000258243 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
URB2-201ENST00000258243 HERC1Q15751 4861 aa4.14□□□□□ -1.75
URB2-201ENST00000258243 RYR2Q92736 4967 aa4.13□□□□□ -1.75
URB2-201ENST00000258243 VPS13BQ7Z7G8 4022 aa4.13□□□□□ -1.75
URB2-201ENST00000258243 BIRC6Q9NR09 4857 aa4.13□□□□□ -1.75
URB2-201ENST00000258243 SPRR2EP22531 72 aa4.12□□□□□ -1.75
URB2-201ENST00000258243 SPRR2BP35325 72 aa4.12□□□□□ -1.75
URB2-201ENST00000258243 SPRR2AP35326 72 aa4.12□□□□□ -1.75
URB2-201ENST00000258243 KRTAP19-8Q3LI54 63 aa4.08□□□□□ -1.76
URB2-201ENST00000258243 HYDINQ4G0P3 5121 aa4.06□□□□□ -1.76
URB2-201ENST00000258243 FRAS1Q86XX4 4008 aa4.06□□□□□ -1.76
URB2-201ENST00000258243 MYCBP2O75592 4640 aa4.04□□□□□ -1.76
URB2-201ENST00000258243 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
URB2-201ENST00000258243 KIAA1109Q2LD37 5005 aa4.03□□□□□ -1.76
URB2-201ENST00000258243 HSPG2P98160 4391 aa4.01□□□□□ -1.77
URB2-201ENST00000258243 PKHD1L1Q86WI1 4243 aa4.01□□□□□ -1.77
URB2-201ENST00000258243 KRTAP19-1Q8IUB9 90 aa4.01□□□□□ -1.77
URB2-201ENST00000258243 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
URB2-201ENST00000258243 SPRR2DP22532 72 aa3.99□□□□□ -1.77
URB2-201ENST00000258243 KRTAP9-8Q9BYQ0 159 aa3.98□□□□□ -1.77
URB2-201ENST00000258243 LRP1Q07954 4544 aaKnown RBP3.97□□□□□ -1.77
URB2-201ENST00000258243 HERC2O95714 4834 aa3.95□□□□□ -1.78
URB2-201ENST00000258243 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
URB2-201ENST00000258243 LCE2CQ5TA81 110 aa3.93□□□□□ -1.78
URB2-201ENST00000258243 LCE2BO14633 110 aa3.93□□□□□ -1.78
URB2-201ENST00000258243 MT1BP07438 61 aa3.93□□□□□ -1.78
URB2-201ENST00000258243 HECTD4Q9Y4D8 3996 aa3.93□□□□□ -1.78
URB2-201ENST00000258243 MT1XP80297 61 aa3.93□□□□□ -1.78
URB2-201ENST00000258243 KRTAP9-3Q9BYQ3 159 aa3.92□□□□□ -1.78
URB2-201ENST00000258243 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
URB2-201ENST00000258243 KMT2CQ8NEZ4 4911 aaKnown RBP3.91□□□□□ -1.78
URB2-201ENST00000258243 PKHD1P08F94 4074 aa3.91□□□□□ -1.78
URB2-201ENST00000258243 PKD1P98161 4303 aa3.88□□□□□ -1.79
URB2-201ENST00000258243 PCLOQ9Y6V0 5065 aa3.82□□□□□ -1.8
URB2-201ENST00000258243 MT1GP13640 62 aa3.79□□□□□ -1.8
URB2-201ENST00000258243 EPPK1P58107 5090 aaKnown RBP3.79□□□□□ -1.8
URB2-201ENST00000258243 KRTAP9-2Q9BYQ4 174 aa3.79□□□□□ -1.8
URB2-201ENST00000258243 KRTAP4-8A0A0G2JLE6 195 aa3.77□□□□□ -1.81
URB2-201ENST00000258243 KRTAP4-8Q9BYQ9 185 aa3.77□□□□□ -1.81
URB2-201ENST00000258243 LRP2P98164 4655 aa3.73□□□□□ -1.81
URB2-201ENST00000258243 LCE3BQ5TA77 95 aa3.73□□□□□ -1.81
URB2-201ENST00000258243 LPAP08519 4548 aa3.72□□□□□ -1.81
URB2-201ENST00000258243 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
URB2-201ENST00000258243 KRTAP19-2Q3LHN2 52 aa3.71□□□□□ -1.82
URB2-201ENST00000258243 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
URB2-201ENST00000258243 MUC17Q685J3 4493 aa3.7□□□□□ -1.82
URB2-201ENST00000258243 LCE2DQ5TA82 110 aaPredicted RBP3.68□□□□□ -1.82
URB2-201ENST00000258243 TNXBP22105 4242 aa3.67□□□□□ -1.82
URB2-201ENST00000258243 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
URB2-201ENST00000258243 KRTAP19-6Q3LI70 58 aa3.65□□□□□ -1.82
URB2-201ENST00000258243 KRTAP9-6A0A140TA67 174 aa3.65□□□□□ -1.82
URB2-201ENST00000258243 ABCA13Q86UQ4 5058 aa3.64□□□□□ -1.83
URB2-201ENST00000258243 LCE2AQ5TA79 106 aaPredicted RBP3.57□□□□□ -1.84
URB2-201ENST00000258243 MT1EP04732 61 aa3.57□□□□□ -1.84
URB2-201ENST00000258243 MT1LQ93083 61 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms