RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 DNAH10Q8IVF4 4471 aa7.87□□□□□ -1.15
EFR3A-201ENST00000254624 DNAH11Q96DT5 4516 aa7.84□□□□□ -1.15
EFR3A-201ENST00000254624 KRTAP12-3P60328 96 aa7.77□□□□□ -1.17
EFR3A-201ENST00000254624 PLECQ15149 4684 aaKnown RBP7.76□□□□□ -1.17
EFR3A-201ENST00000254624 VPS13DQ5THJ4 4388 aa7.76□□□□□ -1.17
EFR3A-201ENST00000254624 LORP23490 312 aaPredicted RBP7.75□□□□□ -1.17
EFR3A-201ENST00000254624 DNAH2Q9P225 4427 aa7.74□□□□□ -1.17
EFR3A-201ENST00000254624 DNAH17Q9UFH2 4485 aa7.72□□□□□ -1.17
EFR3A-201ENST00000254624 ZNF469Q96JG9 3925 aaPredicted RBP7.7□□□□□ -1.18
EFR3A-201ENST00000254624 LCE3AQ5TA76 89 aa7.67□□□□□ -1.18
EFR3A-201ENST00000254624 KRTAP4-1Q9BYQ7 146 aa7.65□□□□□ -1.18
EFR3A-201ENST00000254624 MT1HP80294 61 aa7.61□□□□□ -1.19
EFR3A-201ENST00000254624 DYNC1H1Q14204 4646 aaKnown RBP7.6□□□□□ -1.19
EFR3A-201ENST00000254624 CRCT1Q9UGL9 99 aa7.58□□□□□ -1.2
EFR3A-201ENST00000254624 DNHD1Q96M86 4753 aa7.58□□□□□ -1.2
EFR3A-201ENST00000254624 INE1O15225 51 aa7.54□□□□□ -1.2
EFR3A-201ENST00000254624 DNAH3Q8TD57 4116 aa7.51□□□□□ -1.21
EFR3A-201ENST00000254624 KRTAP8-1Q8IUC2 63 aa7.5□□□□□ -1.21
EFR3A-201ENST00000254624 LRP1BQ9NZR2 4599 aa7.49□□□□□ -1.21
EFR3A-201ENST00000254624 DYNC2H1Q8NCM8 4307 aaKnown RBP7.49□□□□□ -1.21
EFR3A-201ENST00000254624 FAT2Q9NYQ8 4349 aa7.47□□□□□ -1.21
EFR3A-201ENST00000254624 MT2AP02795 61 aa7.46□□□□□ -1.22
EFR3A-201ENST00000254624 STARD9Q9P2P6 4700 aa7.44□□□□□ -1.22
EFR3A-201ENST00000254624 CSMD3Q7Z407 3707 aa7.42□□□□□ -1.22
EFR3A-201ENST00000254624 SPRR2GQ9BYE4 73 aa7.42□□□□□ -1.22
EFR3A-201ENST00000254624 SACSQ9NZJ4 4579 aa7.42□□□□□ -1.22
EFR3A-201ENST00000254624 ANK2Q01484 3957 aa7.38□□□□□ -1.23
EFR3A-201ENST00000254624 DNAH6Q9C0G6 4158 aa7.29□□□□□ -1.24
EFR3A-201ENST00000254624 FAT1Q14517 4588 aa7.28□□□□□ -1.24
EFR3A-201ENST00000254624 MT1FP04733 61 aa7.28□□□□□ -1.24
EFR3A-201ENST00000254624 RYR1P21817 5038 aa7.27□□□□□ -1.25
EFR3A-201ENST00000254624 PRKDCP78527 4128 aaKnown RBP7.23□□□□□ -1.25
EFR3A-201ENST00000254624 DNAH8Q96JB1 4490 aa7.22□□□□□ -1.25
EFR3A-201ENST00000254624 APOBP04114 4563 aaKnown RBP7.09□□□□□ -1.27
EFR3A-201ENST00000254624 RYR3Q15413 4870 aa7.08□□□□□ -1.28
EFR3A-201ENST00000254624 KRTAP17-1Q9BYP8 105 aa7.05□□□□□ -1.28
EFR3A-201ENST00000254624 KMT2AQ03164 3969 aa7.04□□□□□ -1.28
EFR3A-201ENST00000254624 DNAH7Q8WXX0 4024 aa7.03□□□□□ -1.28
EFR3A-201ENST00000254624 KRTAP10-5P60370 271 aa7.02□□□□□ -1.29
EFR3A-201ENST00000254624 VPS13BQ7Z7G8 4022 aa7□□□□□ -1.29
EFR3A-201ENST00000254624 CMYA5Q8N3K9 4069 aa7□□□□□ -1.29
EFR3A-201ENST00000254624 RYR2Q92736 4967 aa6.99□□□□□ -1.29
EFR3A-201ENST00000254624 KRTAP19-4Q3LI73 84 aa6.98□□□□□ -1.29
EFR3A-201ENST00000254624 KRTAP19-5Q3LI72 72 aa6.97□□□□□ -1.29
EFR3A-201ENST00000254624 SPRR2FQ96RM1 72 aa6.97□□□□□ -1.29
EFR3A-201ENST00000254624 KRTAP19-8Q3LI54 63 aa6.96□□□□□ -1.3
EFR3A-201ENST00000254624 FAT3Q8TDW7 4589 aa6.95□□□□□ -1.3
EFR3A-201ENST00000254624 KRTAP10-7P60409 375 aaPredicted RBP6.89□□□□□ -1.31
EFR3A-201ENST00000254624 KRTAP19-1Q8IUB9 90 aa6.86□□□□□ -1.31
EFR3A-201ENST00000254624 HERC1Q15751 4861 aa6.85□□□□□ -1.31
EFR3A-201ENST00000254624 KIAA1109Q2LD37 5005 aa6.85□□□□□ -1.31
EFR3A-201ENST00000254624 LCE3CQ5T5A8 94 aa6.84□□□□□ -1.31
EFR3A-201ENST00000254624 HSPG2P98160 4391 aa6.78□□□□□ -1.32
EFR3A-201ENST00000254624 LYSTQ99698 3801 aa6.77□□□□□ -1.33
EFR3A-201ENST00000254624 HECTD4Q9Y4D8 3996 aa6.75□□□□□ -1.33
EFR3A-201ENST00000254624 BIRC6Q9NR09 4857 aa6.73□□□□□ -1.33
EFR3A-201ENST00000254624 LRP1Q07954 4544 aaKnown RBP6.71□□□□□ -1.33
EFR3A-201ENST00000254624 KRTAP9-8Q9BYQ0 159 aa6.71□□□□□ -1.34
EFR3A-201ENST00000254624 MYCBP2O75592 4640 aa6.68□□□□□ -1.34
EFR3A-201ENST00000254624 MT1XP80297 61 aa6.67□□□□□ -1.34
EFR3A-201ENST00000254624 MT1BP07438 61 aa6.66□□□□□ -1.34
EFR3A-201ENST00000254624 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
EFR3A-201ENST00000254624 FRAS1Q86XX4 4008 aa6.6□□□□□ -1.35
EFR3A-201ENST00000254624 SPRR2EP22531 72 aa6.59□□□□□ -1.35
EFR3A-201ENST00000254624 SPRR2BP35325 72 aa6.59□□□□□ -1.35
EFR3A-201ENST00000254624 SPRR2AP35326 72 aa6.59□□□□□ -1.35
EFR3A-201ENST00000254624 HERC2O95714 4834 aa6.59□□□□□ -1.35
EFR3A-201ENST00000254624 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
EFR3A-201ENST00000254624 PKHD1L1Q86WI1 4243 aa6.57□□□□□ -1.36
EFR3A-201ENST00000254624 PKD1P98161 4303 aa6.52□□□□□ -1.37
EFR3A-201ENST00000254624 HYDINQ4G0P3 5121 aa6.48□□□□□ -1.37
EFR3A-201ENST00000254624 SPRR2DP22532 72 aa6.39□□□□□ -1.39
EFR3A-201ENST00000254624 MT1GP13640 62 aa6.37□□□□□ -1.39
EFR3A-201ENST00000254624 LCE2BO14633 110 aa6.37□□□□□ -1.39
EFR3A-201ENST00000254624 PCLOQ9Y6V0 5065 aa6.35□□□□□ -1.39
EFR3A-201ENST00000254624 KRTAP19-2Q3LHN2 52 aa6.35□□□□□ -1.39
EFR3A-201ENST00000254624 KRTAP4-8A0A0G2JLE6 195 aa6.3□□□□□ -1.4
EFR3A-201ENST00000254624 KRTAP4-8Q9BYQ9 185 aa6.3□□□□□ -1.4
EFR3A-201ENST00000254624 LRP2P98164 4655 aa6.27□□□□□ -1.41
EFR3A-201ENST00000254624 PKHD1P08F94 4074 aa6.26□□□□□ -1.41
EFR3A-201ENST00000254624 TNXBP22105 4242 aa6.22□□□□□ -1.41
EFR3A-201ENST00000254624 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
EFR3A-201ENST00000254624 LCE3BQ5TA77 95 aa6.2□□□□□ -1.42
EFR3A-201ENST00000254624 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
EFR3A-201ENST00000254624 LPAP08519 4548 aa6.15□□□□□ -1.43
EFR3A-201ENST00000254624 MUC17Q685J3 4493 aa6.13□□□□□ -1.43
EFR3A-201ENST00000254624 KRTAP19-3Q7Z4W3 81 aa6.13□□□□□ -1.43
EFR3A-201ENST00000254624 FLGP20930 4061 aaPredicted RBP6.06□□□□□ -1.44
EFR3A-201ENST00000254624 KRTAP19-6Q3LI70 58 aa6.06□□□□□ -1.44
EFR3A-201ENST00000254624 MT1LQ93083 61 aa6.04□□□□□ -1.44
EFR3A-201ENST00000254624 KMT2CQ8NEZ4 4911 aaKnown RBP6.04□□□□□ -1.44
EFR3A-201ENST00000254624 MT1EP04732 61 aa6.03□□□□□ -1.44
EFR3A-201ENST00000254624 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.46
EFR3A-201ENST00000254624 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
EFR3A-201ENST00000254624 LCE2AQ5TA79 106 aaPredicted RBP5.91□□□□□ -1.46
EFR3A-201ENST00000254624 ABCA13Q86UQ4 5058 aa5.91□□□□□ -1.46
EFR3A-201ENST00000254624 LCE3DQ9BYE3 92 aa5.89□□□□□ -1.47
EFR3A-201ENST00000254624 EPPK1P58107 5090 aaKnown RBP5.88□□□□□ -1.47
EFR3A-201ENST00000254624 KRTAP4-7Q9BYR0 210 aa5.84□□□□□ -1.47
EFR3A-201ENST00000254624 MT1MQ8N339 61 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms