RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 DCAF8L2P0C7V8 631 aa32.16■■■□□ 2.74
EFR3A-201ENST00000254624 NISCHQ9Y2I1 1504 aa31.93■■■□□ 2.7
EFR3A-201ENST00000254624 SUPT5HO00267 1087 aaKnown RBP30.32■■■□□ 2.44
EFR3A-201ENST00000254624 SHROOM4Q9ULL8 1493 aa30.01■■■□□ 2.39
EFR3A-201ENST00000254624 EHMT2Q96KQ7 1210 aa28.94■■■□□ 2.22
EFR3A-201ENST00000254624 APLP2Q06481 763 aa28.83■■■□□ 2.21
EFR3A-201ENST00000254624 FAM9AQ8IZU1 332 aaPredicted RBP28.69■■■□□ 2.18
EFR3A-201ENST00000254624 TRIM41Q8WV44 630 aa28.3■■■□□ 2.12
EFR3A-201ENST00000254624 TTBK1Q5TCY1 1321 aaPredicted RBP27.93■■■□□ 2.06
EFR3A-201ENST00000254624 RANGAP1P46060 587 aaPredicted RBP27.93■■■□□ 2.06
EFR3A-201ENST00000254624 PELP1Q8IZL8 1130 aaKnown RBP27.91■■■□□ 2.06
EFR3A-201ENST00000254624 UBTFP17480 764 aaKnown RBP27.88■■■□□ 2.05
EFR3A-201ENST00000254624 PCGF6Q9BYE7 350 aa27.81■■■□□ 2.04
EFR3A-201ENST00000254624 ATP1B4Q9UN42 357 aaPredicted RBP27.8■■■□□ 2.04
EFR3A-201ENST00000254624 ZEB1P37275 1124 aaPredicted RBP27.65■■■□□ 2.02
EFR3A-201ENST00000254624 CCER1Q8TC90 406 aaPredicted RBP27.5■■□□□ 1.99
EFR3A-201ENST00000254624 ABCC9O60706 1549 aa27.44■■□□□ 1.98
EFR3A-201ENST00000254624 CENPBP07199 599 aaPredicted RBP27.13■■□□□ 1.93
EFR3A-201ENST00000254624 PABPN1Q86U42 306 aaKnown RBP eCLIP27.08■■□□□ 1.93
EFR3A-201ENST00000254624 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
EFR3A-201ENST00000254624 TRIM26Q12899 539 aaPredicted RBP27.03■■□□□ 1.92
EFR3A-201ENST00000254624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27■■□□□ 1.91
EFR3A-201ENST00000254624 HNRNPUL2Q1KMD3 747 aaKnown RBP27■■□□□ 1.91
EFR3A-201ENST00000254624 PPARGC1BQ86YN6 1023 aaKnown RBP26.96■■□□□ 1.91
EFR3A-201ENST00000254624 MYT1LQ9UL68 1186 aa26.83■■□□□ 1.89
EFR3A-201ENST00000254624 LOC105371045A0A1W2PR82 267 aa26.8■■□□□ 1.88
EFR3A-201ENST00000254624 ITGAEP38570 1179 aa26.74■■□□□ 1.87
EFR3A-201ENST00000254624 NEFLP07196 543 aa26.63■■□□□ 1.85
EFR3A-201ENST00000254624 ERICH6Q7L0X2 663 aa26.51■■□□□ 1.83
EFR3A-201ENST00000254624 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
EFR3A-201ENST00000254624 ZCCHC6Q5VYS8 1495 aaKnown RBP26.45■■□□□ 1.82
EFR3A-201ENST00000254624 YTHDC1Q96MU7 727 aaKnown RBP26.43■■□□□ 1.82
EFR3A-201ENST00000254624 HRCP23327 699 aa26.35■■□□□ 1.81
EFR3A-201ENST00000254624 SCRIBQ14160 1630 aa26.35■■□□□ 1.81
EFR3A-201ENST00000254624 POLR3GLQ9BT43 218 aa26.31■■□□□ 1.8
EFR3A-201ENST00000254624 FAM50AQ14320 339 aaKnown RBP26.29■■□□□ 1.8
EFR3A-201ENST00000254624 FBLN2P98095 1184 aa26.19■■□□□ 1.78
EFR3A-201ENST00000254624 TRIM52Q96A61 297 aa26.11■■□□□ 1.77
EFR3A-201ENST00000254624 CSRNP3Q8WYN3 585 aa26.09■■□□□ 1.77
EFR3A-201ENST00000254624 RB1CC1Q8TDY2 1594 aa26■■□□□ 1.75
EFR3A-201ENST00000254624 SLC4A1APQ9BWU0 796 aaKnown RBP25.93■■□□□ 1.74
EFR3A-201ENST00000254624 CNGB1Q14028 1251 aaPredicted RBP25.85■■□□□ 1.73
EFR3A-201ENST00000254624 CDK11AQ9UQ88 783 aaPredicted RBP25.83■■□□□ 1.73
EFR3A-201ENST00000254624 NEUROD1Q13562 356 aa25.83■■□□□ 1.73
EFR3A-201ENST00000254624 P3H3Q8IVL6 736 aa25.82■■□□□ 1.72
EFR3A-201ENST00000254624 NACADO15069 1562 aa25.77■■□□□ 1.72
EFR3A-201ENST00000254624 DIEXFQ68CQ4 756 aaKnown RBP25.76■■□□□ 1.71
EFR3A-201ENST00000254624 DAXXQ9UER7 740 aaPredicted RBP25.72■■□□□ 1.71
EFR3A-201ENST00000254624 ARID3CA6NKF2 412 aa25.65■■□□□ 1.7
EFR3A-201ENST00000254624 ZNF326Q5BKZ1 582 aaKnown RBP25.63■■□□□ 1.69
EFR3A-201ENST00000254624 ZNF777Q9ULD5 760 aaPredicted RBP25.58■■□□□ 1.69
EFR3A-201ENST00000254624 ANP32CO43423 234 aa25.52■■□□□ 1.68
EFR3A-201ENST00000254624 NPM1P06748 294 aaKnown RBP eCLIP25.49■■□□□ 1.67
EFR3A-201ENST00000254624 RSF1Q96T23 1441 aaPredicted RBP25.42■■□□□ 1.66
EFR3A-201ENST00000254624 ZNF316A6NFI3 1004 aaPredicted RBP25.39■■□□□ 1.66
EFR3A-201ENST00000254624 BAZ1BQ9UIG0 1483 aaKnown RBP25.37■■□□□ 1.65
EFR3A-201ENST00000254624 DCAF1Q9Y4B6 1507 aa25.37■■□□□ 1.65
EFR3A-201ENST00000254624 BCANQ96GW7 911 aa25.37■■□□□ 1.65
EFR3A-201ENST00000254624 ESF1Q9H501 851 aaKnown RBP25.36■■□□□ 1.65
EFR3A-201ENST00000254624 CHMP7Q8WUX9 453 aaPredicted RBP25.34■■□□□ 1.65
EFR3A-201ENST00000254624 MYT1Q01538 1121 aa25.34■■□□□ 1.65
EFR3A-201ENST00000254624 CLSPNQ9HAW4 1339 aa25.32■■□□□ 1.64
EFR3A-201ENST00000254624 EEA1Q15075 1411 aa25.32■■□□□ 1.64
EFR3A-201ENST00000254624 NEFMP07197 916 aa25.23■■□□□ 1.63
EFR3A-201ENST00000254624 TONSLQ96HA7 1378 aa25.21■■□□□ 1.63
EFR3A-201ENST00000254624 BAZ1AQ9NRL2 1556 aaPredicted RBP25.21■■□□□ 1.63
EFR3A-201ENST00000254624 MTUS2Q5JR59 1369 aa25.19■■□□□ 1.62
EFR3A-201ENST00000254624 CLIP1P30622 1438 aa25.19■■□□□ 1.62
EFR3A-201ENST00000254624 WRNQ14191 1432 aaPredicted RBP eCLIP25.18■■□□□ 1.62
EFR3A-201ENST00000254624 STAG3Q9UJ98 1225 aa25.14■■□□□ 1.62
EFR3A-201ENST00000254624 GOLGA3Q08378 1498 aa25.14■■□□□ 1.61
EFR3A-201ENST00000254624 TSPY4P0CV99 314 aa25.13■■□□□ 1.61
EFR3A-201ENST00000254624 TSPY10P0CW01 314 aa25.13■■□□□ 1.61
EFR3A-201ENST00000254624 ZBTB47Q9UFB7 747 aaPredicted RBP25.11■■□□□ 1.61
EFR3A-201ENST00000254624 CHGAP10645 457 aaKnown RBP25.09■■□□□ 1.61
EFR3A-201ENST00000254624 KIF27Q86VH2 1401 aa25.08■■□□□ 1.6
EFR3A-201ENST00000254624 CHIC2Q9UKJ5 165 aa25.04■■□□□ 1.6
EFR3A-201ENST00000254624 CANXP27824 592 aaKnown RBP25.02■■□□□ 1.6
EFR3A-201ENST00000254624 ACIN1Q9UKV3 1341 aaKnown RBP24.97■■□□□ 1.59
EFR3A-201ENST00000254624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.97■■□□□ 1.59
EFR3A-201ENST00000254624 SLC24A1O60721 1099 aa24.95■■□□□ 1.58
EFR3A-201ENST00000254624 ERCC6Q03468 1493 aa24.95■■□□□ 1.58
EFR3A-201ENST00000254624 PLEKHD1A6NEE1 506 aa24.95■■□□□ 1.58
EFR3A-201ENST00000254624 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
EFR3A-201ENST00000254624 RTL5Q5HYW3 569 aaPredicted RBP24.93■■□□□ 1.58
EFR3A-201ENST00000254624 CEP162Q5TB80 1403 aa24.93■■□□□ 1.58
EFR3A-201ENST00000254624 CECR2Q9BXF3 1484 aa24.88■■□□□ 1.57
EFR3A-201ENST00000254624 TNIKQ9UKE5 1360 aa24.87■■□□□ 1.57
EFR3A-201ENST00000254624 GTF3C3Q9Y5Q9 886 aa24.84■■□□□ 1.57
EFR3A-201ENST00000254624 KCNH8Q96L42 1107 aa24.79■■□□□ 1.56
EFR3A-201ENST00000254624 PLPPR3Q6T4P5 718 aa24.79■■□□□ 1.56
EFR3A-201ENST00000254624 SMARCA2P51531 1590 aa24.75■■□□□ 1.55
EFR3A-201ENST00000254624 RRP7BPQ9NSQ0 103 aa24.72■■□□□ 1.55
EFR3A-201ENST00000254624 DDX10Q13206 875 aaKnown RBP24.71■■□□□ 1.55
EFR3A-201ENST00000254624 MYO15BQ96JP2 1530 aa24.7■■□□□ 1.54
EFR3A-201ENST00000254624 KDM2AQ9Y2K7 1162 aa24.7■■□□□ 1.54
EFR3A-201ENST00000254624 CFDP1Q9UEE9 299 aaPredicted RBP24.69■■□□□ 1.54
EFR3A-201ENST00000254624 CUX2O14529 1486 aa24.62■■□□□ 1.53
EFR3A-201ENST00000254624 FHAD1B1AJZ9 1412 aa24.62■■□□□ 1.53
EFR3A-201ENST00000254624 CARMIL1Q5VZK9 1371 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms