RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 KRTAP12-1P59990 96 aa7.59□□□□□ -1.19
SIN3B-201ENST00000248054 PRKDCP78527 4128 aaKnown RBP7.59□□□□□ -1.19
SIN3B-201ENST00000248054 DNHD1Q96M86 4753 aa7.57□□□□□ -1.2
SIN3B-201ENST00000248054 VPS13DQ5THJ4 4388 aa7.56□□□□□ -1.2
SIN3B-201ENST00000248054 STARD9Q9P2P6 4700 aa7.55□□□□□ -1.2
SIN3B-201ENST00000248054 DNAH1Q9P2D7 4330 aa7.53□□□□□ -1.2
SIN3B-201ENST00000248054 DNAH17Q9UFH2 4485 aa7.48□□□□□ -1.21
SIN3B-201ENST00000248054 DNAH7Q8WXX0 4024 aa7.47□□□□□ -1.21
SIN3B-201ENST00000248054 DYNC2H1Q8NCM8 4307 aaKnown RBP7.43□□□□□ -1.22
SIN3B-201ENST00000248054 KRTAP4-5Q9BYR2 181 aa7.42□□□□□ -1.22
SIN3B-201ENST00000248054 KRTAP3-2Q9BYR7 98 aa7.41□□□□□ -1.22
SIN3B-201ENST00000248054 DNAH5Q8TE73 4624 aa7.41□□□□□ -1.22
SIN3B-201ENST00000248054 KMT2AQ03164 3969 aa7.4□□□□□ -1.22
SIN3B-201ENST00000248054 KRTAP3-3Q9BYR6 98 aa7.38□□□□□ -1.23
SIN3B-201ENST00000248054 DNAH11Q96DT5 4516 aa7.37□□□□□ -1.23
SIN3B-201ENST00000248054 DNAH2Q9P225 4427 aa7.28□□□□□ -1.24
SIN3B-201ENST00000248054 HECTD4Q9Y4D8 3996 aa7.23□□□□□ -1.25
SIN3B-201ENST00000248054 DYNC1H1Q14204 4646 aaKnown RBP7.22□□□□□ -1.25
SIN3B-201ENST00000248054 DNAH8Q96JB1 4490 aa7.19□□□□□ -1.26
SIN3B-201ENST00000248054 DNAH6Q9C0G6 4158 aa7.17□□□□□ -1.26
SIN3B-201ENST00000248054 FRAS1Q86XX4 4008 aa7.14□□□□□ -1.27
SIN3B-201ENST00000248054 LRP1BQ9NZR2 4599 aa7.14□□□□□ -1.27
SIN3B-201ENST00000248054 HYDINQ4G0P3 5121 aa7.11□□□□□ -1.27
SIN3B-201ENST00000248054 FAT2Q9NYQ8 4349 aa7.09□□□□□ -1.28
SIN3B-201ENST00000248054 SACSQ9NZJ4 4579 aa7.06□□□□□ -1.28
SIN3B-201ENST00000248054 KRTAP23-1A1A580 65 aa7.01□□□□□ -1.29
SIN3B-201ENST00000248054 VPS13BQ7Z7G8 4022 aa6.98□□□□□ -1.29
SIN3B-201ENST00000248054 INE1O15225 51 aa6.97□□□□□ -1.29
SIN3B-201ENST00000248054 FAT1Q14517 4588 aa6.97□□□□□ -1.29
SIN3B-201ENST00000248054 PKHD1P08F94 4074 aa6.93□□□□□ -1.3
SIN3B-201ENST00000248054 PKD1P98161 4303 aa6.92□□□□□ -1.3
SIN3B-201ENST00000248054 KRTAP4-1Q9BYQ7 146 aa6.85□□□□□ -1.31
SIN3B-201ENST00000248054 RYR2Q92736 4967 aa6.81□□□□□ -1.32
SIN3B-201ENST00000248054 LORP23490 312 aaPredicted RBP6.79□□□□□ -1.32
SIN3B-201ENST00000248054 KRTAP10-12P60413 245 aa6.77□□□□□ -1.32
SIN3B-201ENST00000248054 KMT2CQ8NEZ4 4911 aaKnown RBP6.77□□□□□ -1.33
SIN3B-201ENST00000248054 APOBP04114 4563 aaKnown RBP6.77□□□□□ -1.33
SIN3B-201ENST00000248054 RYR1P21817 5038 aa6.77□□□□□ -1.33
SIN3B-201ENST00000248054 MT1HP80294 61 aa6.67□□□□□ -1.34
SIN3B-201ENST00000248054 KRTAP17-1Q9BYP8 105 aa6.67□□□□□ -1.34
SIN3B-201ENST00000248054 LRP1Q07954 4544 aaKnown RBP6.64□□□□□ -1.35
SIN3B-201ENST00000248054 KIAA1109Q2LD37 5005 aa6.64□□□□□ -1.35
SIN3B-201ENST00000248054 KRTAP12-3P60328 96 aa6.64□□□□□ -1.35
SIN3B-201ENST00000248054 RYR3Q15413 4870 aa6.63□□□□□ -1.35
SIN3B-201ENST00000248054 SPRR2GQ9BYE4 73 aa6.6□□□□□ -1.35
SIN3B-201ENST00000248054 MT2AP02795 61 aa6.55□□□□□ -1.36
SIN3B-201ENST00000248054 HSPG2P98160 4391 aa6.55□□□□□ -1.36
SIN3B-201ENST00000248054 LCE3AQ5TA76 89 aa6.53□□□□□ -1.36
SIN3B-201ENST00000248054 MYCBP2O75592 4640 aa6.53□□□□□ -1.36
SIN3B-201ENST00000248054 FAT3Q8TDW7 4589 aa6.53□□□□□ -1.36
SIN3B-201ENST00000248054 PKHD1L1Q86WI1 4243 aa6.45□□□□□ -1.38
SIN3B-201ENST00000248054 MT1FP04733 61 aa6.41□□□□□ -1.38
SIN3B-201ENST00000248054 BIRC6Q9NR09 4857 aa6.38□□□□□ -1.39
SIN3B-201ENST00000248054 TNXBP22105 4242 aa6.37□□□□□ -1.39
SIN3B-201ENST00000248054 EPPK1P58107 5090 aaKnown RBP6.36□□□□□ -1.39
SIN3B-201ENST00000248054 HERC2O95714 4834 aa6.29□□□□□ -1.4
SIN3B-201ENST00000248054 KRTAP19-8Q3LI54 63 aa6.25□□□□□ -1.41
SIN3B-201ENST00000248054 HERC1Q15751 4861 aa6.24□□□□□ -1.41
SIN3B-201ENST00000248054 LRP2P98164 4655 aa6.23□□□□□ -1.41
SIN3B-201ENST00000248054 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
SIN3B-201ENST00000248054 SPRR5A0A1B0GTR4 108 aa6.19□□□□□ -1.42
SIN3B-201ENST00000248054 KRTAP8-1Q8IUC2 63 aa6.19□□□□□ -1.42
SIN3B-201ENST00000248054 CRCT1Q9UGL9 99 aa6.17□□□□□ -1.42
SIN3B-201ENST00000248054 LCE2CQ5TA81 110 aa6.15□□□□□ -1.42
SIN3B-201ENST00000248054 LPAP08519 4548 aa6.15□□□□□ -1.43
SIN3B-201ENST00000248054 KRTAP19-4Q3LI73 84 aa6.12□□□□□ -1.43
SIN3B-201ENST00000248054 ABCA13Q86UQ4 5058 aa6.12□□□□□ -1.43
SIN3B-201ENST00000248054 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.44
SIN3B-201ENST00000248054 KRTAP19-2Q3LHN2 52 aa6.03□□□□□ -1.44
SIN3B-201ENST00000248054 MT1BP07438 61 aa5.98□□□□□ -1.45
SIN3B-201ENST00000248054 KRTAP10-5P60370 271 aa5.96□□□□□ -1.46
SIN3B-201ENST00000248054 MT1XP80297 61 aa5.94□□□□□ -1.46
SIN3B-201ENST00000248054 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
SIN3B-201ENST00000248054 KRTAP9-3Q9BYQ3 159 aa5.93□□□□□ -1.46
SIN3B-201ENST00000248054 MUC17Q685J3 4493 aa5.88□□□□□ -1.47
SIN3B-201ENST00000248054 LCE3CQ5T5A8 94 aa5.87□□□□□ -1.47
SIN3B-201ENST00000248054 KRTAP10-7P60409 375 aaPredicted RBP5.86□□□□□ -1.47
SIN3B-201ENST00000248054 PCLOQ9Y6V0 5065 aa5.86□□□□□ -1.47
SIN3B-201ENST00000248054 FLGP20930 4061 aaPredicted RBP5.79□□□□□ -1.48
SIN3B-201ENST00000248054 SPRR2FQ96RM1 72 aa5.74□□□□□ -1.49
SIN3B-201ENST00000248054 MUC2Q02817 5179 aa5.74□□□□□ -1.49
SIN3B-201ENST00000248054 HMCN2Q8NDA2 5059 aa5.65□□□□□ -1.5
SIN3B-201ENST00000248054 LCE2BO14633 110 aa5.62□□□□□ -1.51
SIN3B-201ENST00000248054 RNF213Q63HN8 5207 aa5.53□□□□□ -1.52
SIN3B-201ENST00000248054 LCE2AQ5TA79 106 aaPredicted RBP5.52□□□□□ -1.53
SIN3B-201ENST00000248054 FAT4Q6V0I7 4981 aa5.51□□□□□ -1.53
SIN3B-201ENST00000248054 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
SIN3B-201ENST00000248054 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
SIN3B-201ENST00000248054 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
SIN3B-201ENST00000248054 MT1GP13640 62 aa5.48□□□□□ -1.53
SIN3B-201ENST00000248054 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
SIN3B-201ENST00000248054 SPRR2EP22531 72 aa5.4□□□□□ -1.55
SIN3B-201ENST00000248054 SPRR2BP35325 72 aa5.4□□□□□ -1.55
SIN3B-201ENST00000248054 SPRR2AP35326 72 aa5.4□□□□□ -1.55
SIN3B-201ENST00000248054 LCE2DQ5TA82 110 aaPredicted RBP5.35□□□□□ -1.55
SIN3B-201ENST00000248054 MT1EP04732 61 aa5.33□□□□□ -1.56
SIN3B-201ENST00000248054 MT1LQ93083 61 aa5.32□□□□□ -1.56
SIN3B-201ENST00000248054 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
SIN3B-201ENST00000248054 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
SIN3B-201ENST00000248054 SPRR2DP22532 72 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms