RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 HRES1P13985 223 aa5.04□□□□□ -1.6
HNRNPU-222ENST00000639880 DMBT1Q9UGM3 2413 aaPredicted RBP5.04□□□□□ -1.6
HNRNPU-222ENST00000639880 ZCCHC13Q8WW36 166 aaKnown RBP5.03□□□□□ -1.6
HNRNPU-222ENST00000639880 TENM2Q9NT68 2774 aa5.03□□□□□ -1.6
HNRNPU-222ENST00000639880 MIR22HGQ0VDD5 57 aa5.02□□□□□ -1.61
HNRNPU-222ENST00000639880 Q5VV11 94 aa5.02□□□□□ -1.61
HNRNPU-222ENST00000639880 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
HNRNPU-222ENST00000639880 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
HNRNPU-222ENST00000639880 A0A087X002 238 aa5□□□□□ -1.61
HNRNPU-222ENST00000639880 NOTCH2NLQ7Z3S9 236 aa5□□□□□ -1.61
HNRNPU-222ENST00000639880 KRTAP10-2P60368 255 aa4.99□□□□□ -1.61
HNRNPU-222ENST00000639880 Q75L30 129 aa4.99□□□□□ -1.61
HNRNPU-222ENST00000639880 TGP01266 2768 aa4.99□□□□□ -1.61
HNRNPU-222ENST00000639880 LINC00483Q53H64 154 aa4.98□□□□□ -1.61
HNRNPU-222ENST00000639880 LINC01558Q9Y6Z2 57 aa4.98□□□□□ -1.61
HNRNPU-222ENST00000639880 TRRAPQ9Y4A5 3859 aa4.97□□□□□ -1.61
HNRNPU-222ENST00000639880 Q5W150 140 aa4.97□□□□□ -1.61
HNRNPU-222ENST00000639880 Q6ZRN7 208 aaPredicted RBP4.97□□□□□ -1.61
HNRNPU-222ENST00000639880 SPINK7P58062 85 aa4.96□□□□□ -1.62
HNRNPU-222ENST00000639880 LCE6AA0A183 80 aa4.96□□□□□ -1.62
HNRNPU-222ENST00000639880 KRTAP10-1P60331 282 aa4.95□□□□□ -1.62
HNRNPU-222ENST00000639880 Q6ZR54 194 aa4.95□□□□□ -1.62
HNRNPU-222ENST00000639880 FLG2Q5D862 2391 aaPredicted RBP4.94□□□□□ -1.62
HNRNPU-222ENST00000639880 KRTAP13-1Q8IUC0 172 aa4.92□□□□□ -1.62
HNRNPU-222ENST00000639880 LCA10Q71F78 164 aa4.89□□□□□ -1.63
HNRNPU-222ENST00000639880 A8MU10 97 aa4.89□□□□□ -1.63
HNRNPU-222ENST00000639880 SRRM2Q9UQ35 2752 aaKnown RBP4.87□□□□□ -1.63
HNRNPU-222ENST00000639880 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
HNRNPU-222ENST00000639880 RBM12B-AS1Q9P1G2 102 aa4.87□□□□□ -1.63
HNRNPU-222ENST00000639880 ZNF469Q96JG9 3925 aaPredicted RBP4.87□□□□□ -1.63
HNRNPU-222ENST00000639880 DMAC1Q96GE9 116 aa4.86□□□□□ -1.63
HNRNPU-222ENST00000639880 A0A0D9SG42 100 aa4.85□□□□□ -1.63
HNRNPU-222ENST00000639880 ANK3Q12955 4377 aaKnown RBP4.85□□□□□ -1.63
HNRNPU-222ENST00000639880 A0A1B0GU33 70 aa4.83□□□□□ -1.64
HNRNPU-222ENST00000639880 KRTAP13-2Q52LG2 175 aa4.82□□□□□ -1.64
HNRNPU-222ENST00000639880 SPINT4Q6UDR6 99 aa4.77□□□□□ -1.65
HNRNPU-222ENST00000639880 ASB16-AS1Q495Z4 193 aa4.77□□□□□ -1.65
HNRNPU-222ENST00000639880 FBN3Q75N90 2809 aa4.77□□□□□ -1.65
HNRNPU-222ENST00000639880 LINC01554Q52M75 96 aa4.75□□□□□ -1.65
HNRNPU-222ENST00000639880 CSAG1Q6PB30 78 aa4.74□□□□□ -1.65
HNRNPU-222ENST00000639880 CRIPTQ9P021 101 aa4.73□□□□□ -1.65
HNRNPU-222ENST00000639880 J3QL48 77 aa4.72□□□□□ -1.65
HNRNPU-222ENST00000639880 A6NN06 94 aa4.71□□□□□ -1.66
HNRNPU-222ENST00000639880 Q6ZSA8 131 aa4.7□□□□□ -1.66
HNRNPU-222ENST00000639880 SPATA8Q6RVD6 105 aa4.69□□□□□ -1.66
HNRNPU-222ENST00000639880 MEGF8Q7Z7M0 2845 aa4.69□□□□□ -1.66
HNRNPU-222ENST00000639880 Q5VSD8 79 aa4.68□□□□□ -1.66
HNRNPU-222ENST00000639880 COX6B2Q6YFQ2 88 aa4.68□□□□□ -1.66
HNRNPU-222ENST00000639880 CSMD3Q7Z407 3707 aa4.68□□□□□ -1.66
HNRNPU-222ENST00000639880 ADM2Q7Z4H4 148 aa4.68□□□□□ -1.66
HNRNPU-222ENST00000639880 COL7A1Q02388 2944 aa4.68□□□□□ -1.66
HNRNPU-222ENST00000639880 AKAP9Q99996 3911 aa4.66□□□□□ -1.66
HNRNPU-222ENST00000639880 S4R3F8 94 aa4.66□□□□□ -1.66
HNRNPU-222ENST00000639880 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.66
HNRNPU-222ENST00000639880 H1FX-AS1Q4G0G2 97 aa4.65□□□□□ -1.66
HNRNPU-222ENST00000639880 RPS29P62273 56 aaKnown RBP4.61□□□□□ -1.67
HNRNPU-222ENST00000639880 RPL37P61927 97 aaKnown RBP4.61□□□□□ -1.67
HNRNPU-222ENST00000639880 KRTAP16-1A8MUX0 517 aa4.57□□□□□ -1.68
HNRNPU-222ENST00000639880 A8MUU9 505 aa4.55□□□□□ -1.68
HNRNPU-222ENST00000639880 ROMO1P60602 79 aa4.54□□□□□ -1.68
HNRNPU-222ENST00000639880 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
HNRNPU-222ENST00000639880 C20orf166-AS1Q96NR2 134 aa4.54□□□□□ -1.68
HNRNPU-222ENST00000639880 R4GN34 69 aa4.54□□□□□ -1.68
HNRNPU-222ENST00000639880 CAMK2N1Q7Z7J9 78 aa4.51□□□□□ -1.69
HNRNPU-222ENST00000639880 H3BS24 57 aa4.5□□□□□ -1.69
HNRNPU-222ENST00000639880 M0QZ58 72 aa4.49□□□□□ -1.69
HNRNPU-222ENST00000639880 HUWE1Q7Z6Z7 4374 aaKnown RBP4.48□□□□□ -1.69
HNRNPU-222ENST00000639880 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
HNRNPU-222ENST00000639880 SEC61BP60468 96 aaKnown RBP4.47□□□□□ -1.69
HNRNPU-222ENST00000639880 H0YAA0 97 aa4.46□□□□□ -1.7
HNRNPU-222ENST00000639880 KRTAP21-3Q3LHN1 58 aa4.41□□□□□ -1.7
HNRNPU-222ENST00000639880 XP32Q5T750 250 aa4.41□□□□□ -1.7
HNRNPU-222ENST00000639880 M0R2T5 61 aa4.4□□□□□ -1.71
HNRNPU-222ENST00000639880 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
HNRNPU-222ENST00000639880 DNAH10Q8IVF4 4471 aa4.36□□□□□ -1.71
HNRNPU-222ENST00000639880 C10orf95Q9H7T3 257 aa4.33□□□□□ -1.72
HNRNPU-222ENST00000639880 A0A1B0GVY2 172 aa4.32□□□□□ -1.72
HNRNPU-222ENST00000639880 P0C880 135 aa4.32□□□□□ -1.72
HNRNPU-222ENST00000639880 DNAH9Q9NYC9 4486 aa4.32□□□□□ -1.72
HNRNPU-222ENST00000639880 KRTAP3-1Q9BYR8 98 aa4.31□□□□□ -1.72
HNRNPU-222ENST00000639880 PLECQ15149 4684 aaKnown RBP4.31□□□□□ -1.72
HNRNPU-222ENST00000639880 KRTAP10-8P60410 259 aa4.29□□□□□ -1.72
HNRNPU-222ENST00000639880 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
HNRNPU-222ENST00000639880 DNAH1Q9P2D7 4330 aa4.24□□□□□ -1.73
HNRNPU-222ENST00000639880 ANK2Q01484 3957 aa4.24□□□□□ -1.73
HNRNPU-222ENST00000639880 DNAH11Q96DT5 4516 aa4.23□□□□□ -1.73
HNRNPU-222ENST00000639880 TPRXLQ17RH7 258 aa4.23□□□□□ -1.73
HNRNPU-222ENST00000639880 DNHD1Q96M86 4753 aa4.18□□□□□ -1.74
HNRNPU-222ENST00000639880 PLAC4Q8WY50 150 aa4.18□□□□□ -1.74
HNRNPU-222ENST00000639880 STARD9Q9P2P6 4700 aa4.17□□□□□ -1.74
HNRNPU-222ENST00000639880 KRTAP12-2P59991 146 aa4.16□□□□□ -1.74
HNRNPU-222ENST00000639880 KRTAP13-4Q3LI77 160 aa4.15□□□□□ -1.75
HNRNPU-222ENST00000639880 DNAH5Q8TE73 4624 aa4.15□□□□□ -1.75
HNRNPU-222ENST00000639880 LYSTQ99698 3801 aa4.14□□□□□ -1.75
HNRNPU-222ENST00000639880 KRTAP10-6P60371 365 aaPredicted RBP4.14□□□□□ -1.75
HNRNPU-222ENST00000639880 PRKDCP78527 4128 aaKnown RBP4.13□□□□□ -1.75
HNRNPU-222ENST00000639880 VPS13DQ5THJ4 4388 aa4.13□□□□□ -1.75
HNRNPU-222ENST00000639880 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
HNRNPU-222ENST00000639880 KRTAP10-4P60372 401 aaPredicted RBP4.12□□□□□ -1.75
HNRNPU-222ENST00000639880 KMT2AQ03164 3969 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms