RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 TENM4Q6N022 2769 aa3.06□□□□□ -1.92
POLR2B-213ENST00000639658 NIPBLQ6KC79 2804 aaeCLIP3.06□□□□□ -1.92
POLR2B-213ENST00000639658 TYMSOSQ8TAI1 123 aa3.06□□□□□ -1.92
POLR2B-213ENST00000639658 FBN1P35555 2871 aaKnown RBP3.06□□□□□ -1.92
POLR2B-213ENST00000639658 HUWE1Q7Z6Z7 4374 aaKnown RBP3.06□□□□□ -1.92
POLR2B-213ENST00000639658 FLNBO75369 2602 aaKnown RBP3.06□□□□□ -1.92
POLR2B-213ENST00000639658 ZANQ9Y493 2812 aa3.06□□□□□ -1.92
POLR2B-213ENST00000639658 KRTAP24-1Q3LI83 254 aa3.06□□□□□ -1.92
POLR2B-213ENST00000639658 JMJD1CQ15652 2540 aa3.05□□□□□ -1.92
POLR2B-213ENST00000639658 HIVEP1P15822 2718 aa3.05□□□□□ -1.92
POLR2B-213ENST00000639658 KRTAP10-11P60412 298 aa3.05□□□□□ -1.92
POLR2B-213ENST00000639658 CSMD3Q7Z407 3707 aa3.04□□□□□ -1.92
POLR2B-213ENST00000639658 GCN1Q92616 2671 aaKnown RBP3.04□□□□□ -1.92
POLR2B-213ENST00000639658 RPS29P62273 56 aaKnown RBP3.04□□□□□ -1.92
POLR2B-213ENST00000639658 CAMK2N1Q7Z7J9 78 aa3.04□□□□□ -1.92
POLR2B-213ENST00000639658 RPL37P61927 97 aaKnown RBP3.04□□□□□ -1.92
POLR2B-213ENST00000639658 GVINP1Q7Z2Y8 2422 aa3.03□□□□□ -1.92
POLR2B-213ENST00000639658 ACACBO00763 2458 aa3.03□□□□□ -1.92
POLR2B-213ENST00000639658 USP9XQ93008 2570 aaPredicted RBP3.03□□□□□ -1.92
POLR2B-213ENST00000639658 KRTAP21-3Q3LHN1 58 aa3.03□□□□□ -1.93
POLR2B-213ENST00000639658 CFAP46Q8IYW2 2715 aa3.02□□□□□ -1.93
POLR2B-213ENST00000639658 FN1P02751 2386 aaKnown RBP3.02□□□□□ -1.93
POLR2B-213ENST00000639658 KRTAP3-1Q9BYR8 98 aa3.02□□□□□ -1.93
POLR2B-213ENST00000639658 DNAH2Q9P225 4427 aa3.01□□□□□ -1.93
POLR2B-213ENST00000639658 NBEAL2Q6ZNJ1 2754 aa3.01□□□□□ -1.93
POLR2B-213ENST00000639658 CIRBP-AS1Q8TBR5 109 aa3.01□□□□□ -1.93
POLR2B-213ENST00000639658 UBR5O95071 2799 aaPredicted RBP3.01□□□□□ -1.93
POLR2B-213ENST00000639658 IGF2RP11717 2491 aa3□□□□□ -1.93
POLR2B-213ENST00000639658 XP32Q5T750 250 aa3□□□□□ -1.93
POLR2B-213ENST00000639658 SPINK6Q6UWN8 80 aa3□□□□□ -1.93
POLR2B-213ENST00000639658 SACSQ9NZJ4 4579 aa3□□□□□ -1.93
POLR2B-213ENST00000639658 APLNQ9ULZ1 77 aa2.99□□□□□ -1.93
POLR2B-213ENST00000639658 MYO9AB2RTY4 2548 aa2.99□□□□□ -1.93
POLR2B-213ENST00000639658 HIVEP2P31629 2446 aa2.99□□□□□ -1.93
POLR2B-213ENST00000639658 CRIPTQ9P021 101 aa2.98□□□□□ -1.93
POLR2B-213ENST00000639658 KRTAP10-6P60371 365 aaPredicted RBP2.98□□□□□ -1.93
POLR2B-213ENST00000639658 ZFYVE26Q68DK2 2539 aa2.98□□□□□ -1.93
POLR2B-213ENST00000639658 KRTAP3-2Q9BYR7 98 aa2.98□□□□□ -1.93
POLR2B-213ENST00000639658 SRRM2Q9UQ35 2752 aaKnown RBP2.97□□□□□ -1.93
POLR2B-213ENST00000639658 KRTAP13-2Q52LG2 175 aa2.96□□□□□ -1.93
POLR2B-213ENST00000639658 ZFHX2Q9C0A1 2572 aaPredicted RBP2.96□□□□□ -1.93
POLR2B-213ENST00000639658 USP24Q9UPU5 2620 aa2.96□□□□□ -1.94
POLR2B-213ENST00000639658 PDZD2O15018 2839 aa2.95□□□□□ -1.94
POLR2B-213ENST00000639658 DNAH11Q96DT5 4516 aa2.95□□□□□ -1.94
POLR2B-213ENST00000639658 ITPR3Q14573 2671 aa2.95□□□□□ -1.94
POLR2B-213ENST00000639658 Q8N1X5 172 aa2.95□□□□□ -1.94
POLR2B-213ENST00000639658 PKHD1L1Q86WI1 4243 aa2.94□□□□□ -1.94
POLR2B-213ENST00000639658 VWFP04275 2813 aa2.94□□□□□ -1.94
POLR2B-213ENST00000639658 SPINK1P00995 79 aa2.93□□□□□ -1.94
POLR2B-213ENST00000639658 MEGF8Q7Z7M0 2845 aa2.93□□□□□ -1.94
POLR2B-213ENST00000639658 HECTD1Q9ULT8 2610 aa2.93□□□□□ -1.94
POLR2B-213ENST00000639658 TEP1Q99973 2627 aaKnown RBP2.93□□□□□ -1.94
POLR2B-213ENST00000639658 LRRK2Q5S007 2527 aa2.92□□□□□ -1.94
POLR2B-213ENST00000639658 USP9YO00507 2555 aaPredicted RBP2.92□□□□□ -1.94
POLR2B-213ENST00000639658 KRTAP1-4P0C5Y4 121 aa2.91□□□□□ -1.94
POLR2B-213ENST00000639658 KRTAP13-4Q3LI77 160 aa2.91□□□□□ -1.94
POLR2B-213ENST00000639658 KMT2AQ03164 3969 aa2.91□□□□□ -1.94
POLR2B-213ENST00000639658 RIF1Q5UIP0 2472 aaKnown RBP2.91□□□□□ -1.94
POLR2B-213ENST00000639658 PKD1L1Q8TDX9 2849 aa2.9□□□□□ -1.94
POLR2B-213ENST00000639658 PLAC4Q8WY50 150 aa2.9□□□□□ -1.94
POLR2B-213ENST00000639658 KRTAP3-3Q9BYR6 98 aa2.9□□□□□ -1.94
POLR2B-213ENST00000639658 S4R3F8 94 aa2.9□□□□□ -1.94
POLR2B-213ENST00000639658 FBN3Q75N90 2809 aa2.89□□□□□ -1.95
POLR2B-213ENST00000639658 PLECQ15149 4684 aaKnown RBP2.89□□□□□ -1.95
POLR2B-213ENST00000639658 MYO18BQ8IUG5 2567 aa2.89□□□□□ -1.95
POLR2B-213ENST00000639658 C10orf95Q9H7T3 257 aa2.89□□□□□ -1.95
POLR2B-213ENST00000639658 PRO2289Q9P1D8 64 aa2.88□□□□□ -1.95
POLR2B-213ENST00000639658 FLNCQ14315 2725 aa2.88□□□□□ -1.95
POLR2B-213ENST00000639658 MYCBP2O75592 4640 aa2.88□□□□□ -1.95
POLR2B-213ENST00000639658 J3QKU1 62 aa2.88□□□□□ -1.95
POLR2B-213ENST00000639658 ABCA12Q86UK0 2595 aa2.87□□□□□ -1.95
POLR2B-213ENST00000639658 UBE2DNLQ8IWF7 75 aa2.87□□□□□ -1.95
POLR2B-213ENST00000639658 DNAH5Q8TE73 4624 aa2.87□□□□□ -1.95
POLR2B-213ENST00000639658 TENM3Q9P273 2699 aa2.87□□□□□ -1.95
POLR2B-213ENST00000639658 J3QL48 77 aa2.86□□□□□ -1.95
POLR2B-213ENST00000639658 HELZ2Q9BYK8 2649 aaKnown RBP2.86□□□□□ -1.95
POLR2B-213ENST00000639658 KRTAP12-1P59990 96 aa2.86□□□□□ -1.95
POLR2B-213ENST00000639658 CENPEQ02224 2701 aa2.85□□□□□ -1.95
POLR2B-213ENST00000639658 F8P00451 2351 aa2.85□□□□□ -1.95
POLR2B-213ENST00000639658 KRTAP12-2P59991 146 aa2.85□□□□□ -1.95
POLR2B-213ENST00000639658 PKHD1P08F94 4074 aa2.84□□□□□ -1.95
POLR2B-213ENST00000639658 FLNAP21333 2647 aaKnown RBP2.84□□□□□ -1.96
POLR2B-213ENST00000639658 MTORP42345 2549 aa2.83□□□□□ -1.96
POLR2B-213ENST00000639658 SMR3AQ99954 134 aa2.83□□□□□ -1.96
POLR2B-213ENST00000639658 IGSF10Q6WRI0 2623 aa2.83□□□□□ -1.96
POLR2B-213ENST00000639658 M0QZ58 72 aa2.82□□□□□ -1.96
POLR2B-213ENST00000639658 SETD2Q9BYW2 2564 aaPredicted RBP2.82□□□□□ -1.96
POLR2B-213ENST00000639658 FLG2Q5D862 2391 aaPredicted RBP2.82□□□□□ -1.96
POLR2B-213ENST00000639658 TNXBP22105 4242 aa2.82□□□□□ -1.96
POLR2B-213ENST00000639658 SONP18583 2426 aaKnown RBP2.81□□□□□ -1.96
POLR2B-213ENST00000639658 VPS13BQ7Z7G8 4022 aa2.81□□□□□ -1.96
POLR2B-213ENST00000639658 HSPG2P98160 4391 aa2.81□□□□□ -1.96
POLR2B-213ENST00000639658 PKD1P98161 4303 aa2.8□□□□□ -1.96
POLR2B-213ENST00000639658 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
POLR2B-213ENST00000639658 TENM1Q9UKZ4 2725 aa2.8□□□□□ -1.96
POLR2B-213ENST00000639658 INE1O15225 51 aa2.79□□□□□ -1.96
POLR2B-213ENST00000639658 PP632Q6XCG6 107 aa2.79□□□□□ -1.96
POLR2B-213ENST00000639658 FAT2Q9NYQ8 4349 aa2.79□□□□□ -1.96
POLR2B-213ENST00000639658 POLQO75417 2590 aa2.79□□□□□ -1.96
POLR2B-213ENST00000639658 CCDC168Q8NDH2 2452 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms