RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 FREM2Q5SZK8 3169 aa6.99□□□□□ -1.29
UBE3A-228ENST00000638155 MKI67P46013 3256 aaKnown RBP6.99□□□□□ -1.29
UBE3A-228ENST00000638155 TGP01266 2768 aa6.96□□□□□ -1.29
UBE3A-228ENST00000638155 KRTAP21-3Q3LHN1 58 aa6.96□□□□□ -1.3
UBE3A-228ENST00000638155 CHD9Q3L8U1 2897 aa6.96□□□□□ -1.3
UBE3A-228ENST00000638155 A0A1B0GVY2 172 aa6.96□□□□□ -1.3
UBE3A-228ENST00000638155 FRYLO94915 3013 aa6.92□□□□□ -1.3
UBE3A-228ENST00000638155 KALRNO60229 2985 aa6.91□□□□□ -1.3
UBE3A-228ENST00000638155 RANBP2P49792 3224 aaKnown RBP6.91□□□□□ -1.3
UBE3A-228ENST00000638155 LAMA3Q16787 3333 aa6.91□□□□□ -1.3
UBE3A-228ENST00000638155 PRUNE2Q8WUY3 3088 aa6.91□□□□□ -1.3
UBE3A-228ENST00000638155 NF1P21359 2839 aa6.9□□□□□ -1.31
UBE3A-228ENST00000638155 SZT2Q5T011 3432 aa6.89□□□□□ -1.31
UBE3A-228ENST00000638155 KRTAP7-1Q8IUC3 87 aa6.88□□□□□ -1.31
UBE3A-228ENST00000638155 UNC80Q8N2C7 3258 aa6.87□□□□□ -1.31
UBE3A-228ENST00000638155 XP32Q5T750 250 aa6.87□□□□□ -1.31
UBE3A-228ENST00000638155 VCANP13611 3396 aa6.86□□□□□ -1.31
UBE3A-228ENST00000638155 TNRC18O15417 2968 aaPredicted RBP6.86□□□□□ -1.31
UBE3A-228ENST00000638155 CHD7Q9P2D1 2997 aa6.86□□□□□ -1.31
UBE3A-228ENST00000638155 VPS13AQ96RL7 3174 aa6.84□□□□□ -1.31
UBE3A-228ENST00000638155 SPEGQ15772 3267 aa6.84□□□□□ -1.31
UBE3A-228ENST00000638155 COL12A1Q99715 3063 aa6.8□□□□□ -1.32
UBE3A-228ENST00000638155 KRTAP12-2P59991 146 aa6.79□□□□□ -1.32
UBE3A-228ENST00000638155 TPRXLQ17RH7 258 aa6.79□□□□□ -1.32
UBE3A-228ENST00000638155 DMXL2Q8TDJ6 3036 aa6.75□□□□□ -1.33
UBE3A-228ENST00000638155 HTTP42858 3142 aa6.75□□□□□ -1.33
UBE3A-228ENST00000638155 MYO15AQ9UKN7 3530 aa6.74□□□□□ -1.33
UBE3A-228ENST00000638155 NIPBLQ6KC79 2804 aaeCLIP6.73□□□□□ -1.338e-8■■■■■ 41.9
UBE3A-228ENST00000638155 LAMA1P25391 3075 aa6.73□□□□□ -1.33
UBE3A-228ENST00000638155 CELSR2Q9HCU4 2923 aa6.72□□□□□ -1.33
UBE3A-228ENST00000638155 PDZD2O15018 2839 aa6.7□□□□□ -1.34
UBE3A-228ENST00000638155 SRRM2Q9UQ35 2752 aaKnown RBP6.69□□□□□ -1.34
UBE3A-228ENST00000638155 USP34Q70CQ2 3546 aa6.68□□□□□ -1.34
UBE3A-228ENST00000638155 KRTAP13-4Q3LI77 160 aa6.68□□□□□ -1.34
UBE3A-228ENST00000638155 ASPMQ8IZT6 3477 aa6.68□□□□□ -1.34
UBE3A-228ENST00000638155 SPTBN5Q9NRC6 3674 aaKnown RBP6.68□□□□□ -1.34
UBE3A-228ENST00000638155 INE1O15225 51 aa6.64□□□□□ -1.35
UBE3A-228ENST00000638155 TENM4Q6N022 2769 aa6.63□□□□□ -1.35
UBE3A-228ENST00000638155 COL6A3P12111 3177 aa6.62□□□□□ -1.35
UBE3A-228ENST00000638155 CFAP47Q6ZTR5 3102 aa6.61□□□□□ -1.35
UBE3A-228ENST00000638155 ZZEF1O43149 2961 aa6.6□□□□□ -1.35
UBE3A-228ENST00000638155 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
UBE3A-228ENST00000638155 WDFY3Q8IZQ1 3526 aa6.57□□□□□ -1.36
UBE3A-228ENST00000638155 KRTAP1-4P0C5Y4 121 aa6.56□□□□□ -1.36
UBE3A-228ENST00000638155 TACC2O95359 2948 aa6.55□□□□□ -1.36
UBE3A-228ENST00000638155 DCHS2Q6V1P9 2916 aa6.5□□□□□ -1.37
UBE3A-228ENST00000638155 KRTAP13-3Q3SY46 172 aa6.5□□□□□ -1.37
UBE3A-228ENST00000638155 CELSR1Q9NYQ6 3014 aa6.49□□□□□ -1.37
UBE3A-228ENST00000638155 VWFP04275 2813 aa6.48□□□□□ -1.37
UBE3A-228ENST00000638155 BOD1L1Q8NFC6 3051 aa6.48□□□□□ -1.37
UBE3A-228ENST00000638155 ATMQ13315 3056 aa6.47□□□□□ -1.37
UBE3A-228ENST00000638155 PKD1L1Q8TDX9 2849 aa6.46□□□□□ -1.37
UBE3A-228ENST00000638155 ZANQ9Y493 2812 aa6.44□□□□□ -1.38
UBE3A-228ENST00000638155 NBEAQ8NFP9 2946 aa6.44□□□□□ -1.38
UBE3A-228ENST00000638155 ADGRG4Q8IZF6 3080 aa6.43□□□□□ -1.38
UBE3A-228ENST00000638155 NBPF19A0A087WUL8 3843 aa6.43□□□□□ -1.38
UBE3A-228ENST00000638155 KRTAP12-1P59990 96 aa6.43□□□□□ -1.38
UBE3A-228ENST00000638155 DCHS1Q96JQ0 3298 aa6.38□□□□□ -1.39
UBE3A-228ENST00000638155 LOC400499M0QZD8 3231 aa6.36□□□□□ -1.39
UBE3A-228ENST00000638155 TENM2Q9NT68 2774 aa6.36□□□□□ -1.39
UBE3A-228ENST00000638155 LAMA5O15230 3695 aa6.33□□□□□ -1.4
UBE3A-228ENST00000638155 ZFHX4Q86UP3 3567 aa6.3□□□□□ -1.4
UBE3A-228ENST00000638155 EYSQ5T1H1 3165 aa6.29□□□□□ -1.4
UBE3A-228ENST00000638155 DMXL1Q9Y485 3027 aa6.28□□□□□ -1.4
UBE3A-228ENST00000638155 FBN2P35556 2912 aa6.25□□□□□ -1.41
UBE3A-228ENST00000638155 RELNP78509 3460 aa6.24□□□□□ -1.41
UBE3A-228ENST00000638155 MXRA5Q9NR99 2828 aa6.21□□□□□ -1.42
UBE3A-228ENST00000638155 CRCT1Q9UGL9 99 aa6.19□□□□□ -1.42
UBE3A-228ENST00000638155 COL7A1Q02388 2944 aa6.16□□□□□ -1.42
UBE3A-228ENST00000638155 KRTAP10-12P60413 245 aa6.09□□□□□ -1.43
UBE3A-228ENST00000638155 MEGF8Q7Z7M0 2845 aa6.08□□□□□ -1.44
UBE3A-228ENST00000638155 ZFHX3Q15911 3703 aa6.07□□□□□ -1.44
UBE3A-228ENST00000638155 HRNRQ86YZ3 2850 aaPredicted RBP6.04□□□□□ -1.44
UBE3A-228ENST00000638155 SPENQ96T58 3664 aaKnown RBP6.02□□□□□ -1.45
UBE3A-228ENST00000638155 CSMD1Q96PZ7 3565 aa6□□□□□ -1.45
UBE3A-228ENST00000638155 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
UBE3A-228ENST00000638155 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
UBE3A-228ENST00000638155 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
UBE3A-228ENST00000638155 CUBNO60494 3623 aa5.86□□□□□ -1.47
UBE3A-228ENST00000638155 FBN3Q75N90 2809 aa5.85□□□□□ -1.47
UBE3A-228ENST00000638155 KRTAP10-5P60370 271 aa5.84□□□□□ -1.47
UBE3A-228ENST00000638155 SMG1Q96Q15 3661 aaKnown RBP5.84□□□□□ -1.47
UBE3A-228ENST00000638155 CSMD2Q7Z408 3487 aa5.81□□□□□ -1.48
UBE3A-228ENST00000638155 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
UBE3A-228ENST00000638155 DMDP11532 3685 aa5.81□□□□□ -1.48
UBE3A-228ENST00000638155 OTOGQ6ZRI0 2925 aa5.76□□□□□ -1.49
UBE3A-228ENST00000638155 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
UBE3A-228ENST00000638155 MUC3AQ02505 3323 aa5.65□□□□□ -1.5
UBE3A-228ENST00000638155 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
UBE3A-228ENST00000638155 KRTAP3-2Q9BYR7 98 aa5.6□□□□□ -1.51
UBE3A-228ENST00000638155 FBN1P35555 2871 aaKnown RBP5.59□□□□□ -1.51
UBE3A-228ENST00000638155 SVEP1Q4LDE5 3571 aa5.58□□□□□ -1.52
UBE3A-228ENST00000638155 KRTAP3-3Q9BYR6 98 aa5.55□□□□□ -1.52
UBE3A-228ENST00000638155 LORP23490 312 aaPredicted RBP5.53□□□□□ -1.52
UBE3A-228ENST00000638155 TRRAPQ9Y4A5 3859 aa5.52□□□□□ -1.53
UBE3A-228ENST00000638155 VPS13CQ709C8 3753 aa5.44□□□□□ -1.54
UBE3A-228ENST00000638155 CSMD3Q7Z407 3707 aa5.39□□□□□ -1.55
UBE3A-228ENST00000638155 KRTAP10-7P60409 375 aaPredicted RBP5.34□□□□□ -1.55
UBE3A-228ENST00000638155 AKAP9Q99996 3911 aa5.33□□□□□ -1.56
UBE3A-228ENST00000638155 MT1HL1P0DM35 61 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms